Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0302 ATGGTGATATCTTCACCCTCTTGGGGTCGCTCCTTAGGGGAGGATACTCGAAAGACTTTCGTTTCTCATCTCTATGCTGCACTCACAAATGCAGCAATCCGCACTTTTCGTGACGACAAGGAGCTTAGAAAGGGAAATAAGCTGGAACCAGAAATAAAGAGAGCAATAGAAGGGTCTCGGATATCTATCGTTGTTCTCTCACCTTACTATGCAGGATCTAGCTGGTGTCTTAACGAACTTGTACACATCCTGCATTGCAGCCATACTTATGGGCAGGTGGTTATGCCCGTATTTTACCATGTTGACCCATCGCATGTCCGTAAGCTGGAAGGTAATTTTGGAACAATTTTTGAACTCCATGCAATTCATAGAGAGCATGAACTGTTGTCCAAGTGGAAGACCGTACTCACTGAAGTTTCAAATCTGTCTGGCTGGGATCTCAACAATATCAGTAATGAAGGTGAACTAGTGAAGCAAATTGTTGAGGACACTTTGGCAAAACTAGATATCTCATTGTTGTCTATTACTGAATATCCGGTTGGATTGGATTCCCGTGTGCAACAAATTACCAAGTTTATTGATCATCAATCAACAGAAGTCTGTATGATAGGGATATGGGGAATGGGTGGATCCGGGAAAACAACCACGGCCAAAGCTATCTACAATCAAATCCGTTCTAGATTTAAGGGTAGAGCAAGTTTCATCGAAAGTATTCGAGAAGTTTGTGATAATAATAATAGAGGGGTTATTCCTTTACAACAACAACTTCTTTTAGATCTCTTGAAAATAAAACAAGAGATTCATAGCATTGCCTCAGGGATAACTAAGATTGAGAAAAGACTTCGAGGACAAACAGTTTTTGTCATACTTGATGATGTGACCACATCTGAGCAATTAAAAAACCTGTGTGCAGATCCTAAGTTGTTCGGTTCGGGAAGTGTATTGATTATTACAACTAGAGATGGACGCCTTCTCAAATCACTTAGTGGTGACCATATCTTCACAATGACAGAAATGGACGAAGACCAGTCCCTTGAACTTTTCTGTTGGCATGCTTTTCAAAAACCATATCCAAGATATAGTTTTAGTGAACTCACTAAAAATGTAGTTGGTTATTGCGGAGGATTACCACTGGCTCTTGAAGTCCTTGGAAGTTACTTATCAAAGAGGACAACCCGAGAATGGAGAAGTGCACTATCAAAATTAGAGAAAATTCCCAACAATGAAGTGCAACAGATATTGAGAATCAGCTATGATGGTTTACAAGATTATACACAAAAGGACATATTTCTTGACATATGTTGTTTCTTGATTGGAAAGAACAGAGCTGATGTTACAGAGATACTTAATGCATGTGGACTTCATGCTGATATTGGAATATCTATTCTCATAGAGCGCAGCCTCCTAAAAGTCGAAAAGAATAACAAGCTTGGAATGCATGATTTGCTCAGAGACATGGGAAGAGCAATTGCTGGTGAAAGTTCAATCAAAGATATGCGATTGTGGTTTCATGACGATGTGCTGCATGTATTGTCAAAAAAAACCGGAACATATACTATTGTGGGAATGATTTTGAAGTACCAAAGAACAGGCAGAATTATATTTGGTACTGATTCTTTGCAGGAGATGCAAAAGCTGAGACTTTTAAAACTTGATGGTGTTCACCTTATGGGAGAATATGGGTTAATTTCCAAACAACTGAGATGGGTTGATTGGCAACGATCTGCTTTCAAATTTATACCGAATGACTTTGATCTGGAAAATTTAGTTGTTTTTGAATTAAAACATAGCAATCTTAGACAAGTTTGGCAGGAGACCAAGATATTAGACAAGCTGAAAATTCTCAATGTCAGTCATAATAAGTACTTGAAAATCACCCCAGACTTTTCAAAATTACCGAATCTAGAAAAGCTCATTATGAAGGACTGTCCGAGCTTGTCTGAGGTACACCAGTCCATTGGGGACCTCAAGAGTCTCGTTCTGATAAATTTGAGGGACTGTACAAGTCTTGCCAATCTCCCAAGAGAGATCTATCAATTGAAATCAGTGAAAACTCTCATTATTTCTGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATATTGCAAATGGAATCCTTGACAACTCTAATTGCAGCAAATACTGGTGTCAAACAAGTTCCTTTTTCGATTGTTAGATCAAAAAGCATTGCATATATATCTCTATGTGGATATAAAGGATTATCGTCTGATGTTTTTCCTTCTCTCATTTGGTCATGGATGTCACCAACCAGAAATTCCCTATCCCGTATTTCTCCGTTTGCAGGCAATTCATTGTCTCTAGTTTCCTTGCATGCGGAAAGTAATAATATGGACTATCAATCACCAATGCTTACCGTCCTTTCAAAGCTTCGATGTGTTTGGTTTCAATGCCAGTCAGAGAATCAACTTACTCAAGAATTAAGAAGATTTATTGATGATCTATATGATGTGAATTTTACTGAGTTGGAAACAACATCACATGGACACCAAATCACAAATCTTTCCTTGAAATCAATTGTGATTGGAATGGGAAGTTCCCAAATAGTCATGGATACTCTTGATAAGAGCTTAGCACAGGGTTTGGCAACCAATTCTAGTGATTCTTTCCTTCCGGGTGACAATTATCCTTATTGGTTAGCCTATAAATGCGAAGGACCTTCAGTACATTTCGAAGTGCCTGAGGATAGTGGTTCCTGCATGAAGGGAATAGCTTTGTGTGTTGTTTATTCGTTAACACCTCAAAACCTGCCAATTGAATGTATCACTAGTGTCTTAATCATTAATTACACAAAACTCACTATCCAAATTTACAAGCGTGACACAATAATGTCTTTTAATGATGAAGATTGGGAAGGTGTAGTGTCAAATTTAAAAGTTGATGACAATGTGGAGATTTTTGTAGCTATTGGGCATGGATTGACTGTTAAGGAGACGGCTGTCTATCTAATATATGGTCAGCCAGCTGCTATGGAAATTGAACCAATACCTGAAGTGGAGGTGCAACCATCACTCGATGTGAAAACGGAGTCATCCCCTGGAGCGGAAGCGCAATCATCACCTGATGTGAAAAGGAGACGGCTATCGATTACTGTGGAAGTTAAGCCATTGCCTAAGCCATATGAAATCTTAACAAGACTTGTAAAGAGAGTTTTGCTGAAATGTTTATGTATGGATTAG 3198 0.3862 MVISSPSWGRSLGEDTRKTFVSHLYAALTNAAIRTFRDDKELRKGNKLEPEIKRAIEGSRISIVVLSPYYAGSSWCLNELVHILHCSHTYGQVVMPVFYHVDPSHVRKLEGNFGTIFELHAIHREHELLSKWKTVLTEVSNLSGWDLNNISNEGELVKQIVEDTLAKLDISLLSITEYPVGLDSRVQQITKFIDHQSTEVCMIGIWGMGGSGKTTTAKAIYNQIRSRFKGRASFIESIREVCDNNNRGVIPLQQQLLLDLLKIKQEIHSIASGITKIEKRLRGQTVFVILDDVTTSEQLKNLCADPKLFGSGSVLIITTRDGRLLKSLSGDHIFTMTEMDEDQSLELFCWHAFQKPYPRYSFSELTKNVVGYCGGLPLALEVLGSYLSKRTTREWRSALSKLEKIPNNEVQQILRISYDGLQDYTQKDIFLDICCFLIGKNRADVTEILNACGLHADIGISILIERSLLKVEKNNKLGMHDLLRDMGRAIAGESSIKDMRLWFHDDVLHVLSKKTGTYTIVGMILKYQRTGRIIFGTDSLQEMQKLRLLKLDGVHLMGEYGLISKQLRWVDWQRSAFKFIPNDFDLENLVVFELKHSNLRQVWQETKILDKLKILNVSHNKYLKITPDFSKLPNLEKLIMKDCPSLSEVHQSIGDLKSLVLINLRDCTSLANLPREIYQLKSVKTLIISGCSKIDKLEEDILQMESLTTLIAANTGVKQVPFSIVRSKSIAYISLCGYKGLSSDVFPSLIWSWMSPTRNSLSRISPFAGNSLSLVSLHAESNNMDYQSPMLTVLSKLRCVWFQCQSENQLTQELRRFIDDLYDVNFTELETTSHGHQITNLSLKSIVIGMGSSQIVMDTLDKSLAQGLATNSSDSFLPGDNYPYWLAYKCEGPSVHFEVPEDSGSCMKGIALCVVYSLTPQNLPIECITSVLIINYTKLTIQIYKRDTIMSFNDEDWEGVVSNLKVDDNVEIFVAIGHGLTVKETAVYLIYGQPAAMEIEPIPEVEVQPSLDVKTESSPGAEAQSSPDVKRRRLSITVEVKPLPKPYEILTRLVKRVLLKCLCMD* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0302 1065 Gene3D - 172 335 IPR027417 -
Mtr8g0302 1065 SMART till_3 13 142 IPR000157 GO:0007165
Mtr8g0302 1065 Gene3D Ribonuclease Inhibitor 525 848 IPR032675 -
Mtr8g0302 1065 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 145 IPR035897 -
Mtr8g0302 1065 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 991 - -
Mtr8g0302 1065 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 991 IPR044974 GO:0006952
Mtr8g0302 1065 Pfam TIR domain 13 169 IPR000157 GO:0007165
Mtr8g0302 1065 PRINTS Disease resistance protein signature 202 217 - -
Mtr8g0302 1065 PRINTS Disease resistance protein signature 280 294 - -
Mtr8g0302 1065 PRINTS Disease resistance protein signature 373 387 - -
Mtr8g0302 1065 PRINTS Disease resistance protein signature 654 670 - -
Mtr8g0302 1065 ProSiteProfiles TIR domain profile. 1 168 IPR000157 GO:0007165
Mtr8g0302 1065 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 433 IPR027417 -
Mtr8g0302 1065 Gene3D - 11 171 IPR035897 -
Mtr8g0302 1065 Pfam NB-ARC domain 185 419 IPR002182 GO:0043531
Mtr8g0302 1065 Gene3D - 338 422 IPR042197 -
Mtr8g0302 1065 SUPERFAMILY L domain-like 479 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0302 Mtr-Chr8 3310919 3316926 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0302 8 724 WRKY Transcription Factor Family AT4G12020 28.455 1.85e-65 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0302 - - mtr:MTR_2g437560 1169.84