Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0301 ATGTCTTCTTCTTCTTCAAGGTCCAGACCTCAATGGATACACGACGTGTTCATCAATTTTAGAGGGAAAGATACTCGCAAGACTTTTGTTTCTCATCTCTATGCTGCTCTCACAGACGCTGGAATCAATACTTTTCTTGATGATGAGAATCTTAAAAAGGGAGAGGAGCTTGGACCAGAATTAGTTCGAGCAATACAAGGTTCTCAGATAGCCATCGTTGTTTTCTCTAAAAACTACGTTAATTCTAGTTGGTGTCTTAATGAACTCGAACAAATCATGAAATGCAAAGCAGATAACGGTCAGGTTGTTATGCCAGTATTTAACGGTATCACCCCTTCGAATATACGTCAACATTCCCCGGTAATATTAGTAGATGAGTTAGATCAAATTATATTTGGAAAAAAAAGGGCACTCCGCGATGTTTCGTATTTGACTGGTTGGGATATGAGTAATTACAGTAATCAAAGCAAAGTTGTGAAGGAAATTGTTTCTCAAGTTTTGAAAAATCTAGACAAAAAATACTTACCTCTGCCAAATTTTCAAGTTGGATTAAAACCCCGTGCGGAAAAGCCGATTCGATTTTTAAGACAAAATACAAGAAAAGTTTGTTTAGTAGGGATTTGGGGGATGGGGGGGATTGGCAAAAGCACTATTGCCAAAGTCATATACAATGATCTTTGTTATGAATTTGAAGATCAAAGCTTCGTTGCTAATATTAGAGAAGTTTGGGAGAAAGATAGGGGCAGAATCGATTTACAAGAACAACTTCTTTCAGATATCCTGAAAACAAGAAAGATAAAGGTGCTTAGTGTTGAGCAAGGAAAAGCTATGATCAAGCAACGACTTCGTTCAAAACGCATACTTGCTGTACTTGATGATGTTAGTGAGCTTGAGCAATTTAATGCACTATGTGAAGGAAATAGTGTTGGTCCGGGAAGTGTAATAATCATCACAACCAGAGATCTGCGTGTACTTAATATCCTTGAAGTTGATTTTATCTATGAAGCAGAGGGATTGAATGCTAGCGAGTCCCTTGAGCTTTTCTGTGGACATGCTTTTAGGAAGGTAATTCCAACAGAAGACTTCCTTATTCTCTCAAGATATGTAGTTGCCTATTGTGGTGGAATACCACTAGCTCTTGAAGTCCTTGGATCTTACTTATTGAAGAGGAGAAAACAAGAGTGGCAGAGTGTATTATCAAAGCTTGAAAAAATACCCAATGATCAAATACATGAGAAACTAAAAATTAGCTTTAATGGTTTAAGCGATCGTATGGAAAAGGATATATTTCTTGATGTCTGTTGTTTCTTTATCGGCAAGGATAGAGCTTATGTTACAAAGATACTAAATGGTTGTGGACTTCATGCTGATATTGGAATAACAGTGTTGATAGAGAGAAGCCTCATAAAAGTTGAAAAGAATAAAAAGCTTGGAATGCATGATTTGCTACGAGACATGGGAAGGGAAATTGTTCGTGAAAGTTCACCGGAGGAGCCTGAGAAGCGTACCCGATTGTGGTGTCATGAGGACGTAGTTAATGTACTGGAAGACCATACCGGAACAAAAGCCATCGAGGGATTGGTTATGAAGTTGCCAAAGACCAATAGAGTTTGCTTTGATACAATTGCTTTTGAGAAAATGAAGAGATTGAGATTGTTGCAACTTGATAATGTACAAGTCATCGGAGATTACAAGTGTTTTTCAAAGCACCTGAGATGGCTTTCTTGGCAAGGATTTCCATTAAAATACACACCAGAAAACTTTTATCAGAAAAATGTAGTTGCTATGGACTTAAAACACAGTAATCTCACACAAGTTTGGAAGAAGCCTCAGTTGATAGAGGGACTGAAGATCCTAAATCTCAGTCATTCTAAGTACTTGAAAAGAACCCCTGACTTTTCAAAGTTACCAAACCTAGAAAAGCTAATTATGAAGGATTGTCAAAGTCTGTTGGAGGTACACCCGTCCATTGGAGATCTCAAGAATCTTCTTCTGTTAAATTTGAAGGACTGTACGAGTCTTAGCAATCTCCCAAGAGAGATCTATCAATTGAGAACAGTGGAAACTCTCATCCTTTCTGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATAGTGCAAATGGAATCCTTGACAACTCTAATGGCAGCAAATACTGGAGTCAAACAACCACCATTTTCGATAGTGAGATCAAAAAGCATTGGATATATATCTCTATGTGGATATGAAGGATTATCACATCATGTTTTTCCTTCTCTCATTAGGTCTTGGATGTCACCAACAATGAATTCTGTAGCACATATTTCCCCTTTTGGTGGCATGTCAAAGTCTCTTGCTTCCTTGGATATAGAGAGCAATAATCTGGCTTTAGTCTATCAATCACAAATACTTAGCAGCTGTTCAAAACTTAGAAGTGTTTCGGTACAATGTGACTCAGAGATTCAACTGAAACAAGAATTCAGAAGATTTCTTGATGATCTATATGATGCCGGTCTTACTGAATTGGGAATATCACATGCATCACACATTTCGGATCATTCCTTGAGATCTCTTTTGATTGGAATGGGAAATTGCCACATAGTCATCAATATTCTTGGGAAGAGCTTATCACAGGGATTGACAACCAATTCTCGTGATAATTTCCTTCCGGGTGATAATTATCCTTCTTGGTTAGCCTATCGAGGTGAAGGACCTTCTGTATTATTTCAAGTTCCCGACGATACCAATTACTGCATGAAGGGAATGACTTTATGTGTTCTTTATTCAACAACACCTGAAAACTTAGCAACTGAAGGTCTGACTAGTGTCTTGATTATTAATTACACAAAATTAACTATCCAAATTTACAGGCGAGACACAGTAATGTCTTTTAATGATGAAGATTGGCAAGACGTGGTATCAAAATTAGGAGTTGGTGACAATGTGGAGATTTTTGTATCTATTGGGCATGGATGGACTGTTAAGAAGATGACTGTCTATCTAATTTACGATCAGTCAAATGCTATGGAAATCGAGTCATCAAATGCTATGGAAGTTGCCCCATCCAGTGACGCAAAAATGGAGCCATTACATGAAGTGGAATTGAAACCGTCACCCAATGTAAAAATGGATCCATCAGCTGAAGAGGAAGTACAACCATCACTTGATGTGAAAATGGAACCATCAGTTGTTGTCAAGAATGAACCATTACTGAAGACAAGTAGAAAAAACTTTACGAGACTTGCAAAGAGAGTGGGAGAATGTTTATGCTTGAACCATAATTGA 3264 0.3768 MSSSSSRSRPQWIHDVFINFRGKDTRKTFVSHLYAALTDAGINTFLDDENLKKGEELGPELVRAIQGSQIAIVVFSKNYVNSSWCLNELEQIMKCKADNGQVVMPVFNGITPSNIRQHSPVILVDELDQIIFGKKRALRDVSYLTGWDMSNYSNQSKVVKEIVSQVLKNLDKKYLPLPNFQVGLKPRAEKPIRFLRQNTRKVCLVGIWGMGGIGKSTIAKVIYNDLCYEFEDQSFVANIREVWEKDRGRIDLQEQLLSDILKTRKIKVLSVEQGKAMIKQRLRSKRILAVLDDVSELEQFNALCEGNSVGPGSVIIITTRDLRVLNILEVDFIYEAEGLNASESLELFCGHAFRKVIPTEDFLILSRYVVAYCGGIPLALEVLGSYLLKRRKQEWQSVLSKLEKIPNDQIHEKLKISFNGLSDRMEKDIFLDVCCFFIGKDRAYVTKILNGCGLHADIGITVLIERSLIKVEKNKKLGMHDLLRDMGREIVRESSPEEPEKRTRLWCHEDVVNVLEDHTGTKAIEGLVMKLPKTNRVCFDTIAFEKMKRLRLLQLDNVQVIGDYKCFSKHLRWLSWQGFPLKYTPENFYQKNVVAMDLKHSNLTQVWKKPQLIEGLKILNLSHSKYLKRTPDFSKLPNLEKLIMKDCQSLLEVHPSIGDLKNLLLLNLKDCTSLSNLPREIYQLRTVETLILSGCSKIDKLEEDIVQMESLTTLMAANTGVKQPPFSIVRSKSIGYISLCGYEGLSHHVFPSLIRSWMSPTMNSVAHISPFGGMSKSLASLDIESNNLALVYQSQILSSCSKLRSVSVQCDSEIQLKQEFRRFLDDLYDAGLTELGISHASHISDHSLRSLLIGMGNCHIVINILGKSLSQGLTTNSRDNFLPGDNYPSWLAYRGEGPSVLFQVPDDTNYCMKGMTLCVLYSTTPENLATEGLTSVLIINYTKLTIQIYRRDTVMSFNDEDWQDVVSKLGVGDNVEIFVSIGHGWTVKKMTVYLIYDQSNAMEIESSNAMEVAPSSDAKMEPLHEVELKPSPNVKMDPSAEEEVQPSLDVKMEPSVVVKNEPLLKTSRKNFTRLAKRVGECLCLNHN* 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0301 1087 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 122 IPR035897 -
Mtr8g0301 1087 Pfam NB-ARC domain 194 408 IPR002182 GO:0043531
Mtr8g0301 1087 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 996 IPR044974 GO:0006952
Mtr8g0301 1087 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 996 - -
Mtr8g0301 1087 SMART till_3 13 157 IPR000157 GO:0007165
Mtr8g0301 1087 Pfam TIR domain 14 172 IPR000157 GO:0007165
Mtr8g0301 1087 Gene3D Ribonuclease Inhibitor 471 850 IPR032675 -
Mtr8g0301 1087 ProSiteProfiles TIR domain profile. 12 170 IPR000157 GO:0007165
Mtr8g0301 1087 Gene3D - 170 332 IPR027417 -
Mtr8g0301 1087 PRINTS Disease resistance protein signature 204 219 - -
Mtr8g0301 1087 PRINTS Disease resistance protein signature 281 295 - -
Mtr8g0301 1087 PRINTS Disease resistance protein signature 373 387 - -
Mtr8g0301 1087 PRINTS Disease resistance protein signature 658 674 - -
Mtr8g0301 1087 Gene3D - 338 422 IPR042197 -
Mtr8g0301 1087 SUPERFAMILY L domain-like 479 809 - -
Mtr8g0301 1087 Gene3D - 6 169 IPR035897 -
Mtr8g0301 1087 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 432 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0301 Mtr-Chr8 3303184 3309842 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0301 14 728 WRKY Transcription Factor Family AT4G12020 30.189 3.99e-76 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0301 - - mtr:MTR_8g011710 1687.93