LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g0297	ATGGATATGCGAAATCCTCGATCGAAACCCCAAAGCAAATGGACATACGATGTGTTCATCAATTTCAGGGGGGCAGACACTCGTAAGACGTTCATTTCTCATCTCTATACTGCTCTCACAAATGCTGGAATCAATACTTTTCTTGATAATGAAAATCTTCAAAAGGGAAAGGAGCTGGGACCAGAATTAATTCGAGCAATACAAGGTTCTCAGATAGCCATCGTTGTTTTCTCCAAAAACTACGTTCATTCTAGATGGTGTCTCAGTGAACTCAAACAAATCATGGAATGCAAAGCAAATGATGGTCAGGTTGTTATGCCAGTATTTTATTGTATTACCCCTTCGAATATACGTCAATATGCTGTCACAAGATTTTCTGAGACAACACTGTTCTTTGATGAGTTAGTTCCATTTATGAATACACTCCAGGATGCTTCGTATTTGTCTGGTTGGGATTTGAGTAATTACAGTAATGAAAGCAAAGTTGTGAAGGAAATTGTTTCCCAAGTTTTGAAAAATCTAGACAATAAATACTTACCTCTGCCAGATTTTCAAGTTGGATTAGAACCCCGTGCGGAAAAGTCGATTCGATTTTTAAGACAAAATACAAGAGGAGTTTGTTTAGTAGGGATTTGGGGGATGGGGGGGATTGGCAAAAGCACTATTGCCAAAGTCATCTACAATGATCTTTGTTATGAATTTGAAAATCAAAGCTTCCTTGCTAATATTAGAGAAGTTTGGGAGAAAGATAGGGGCAGAATCGATTTACAAGAACAATTTCTTTCAGATATCCTCAAAACAAGAAAGATAAAGGTGCTTAGTGTTGAGCAAGGAAAAACTATGATCAAGCAACAACTTCGCGCAAAACGCATACTTGCTGTACTTGATGATGTTAGTGAGCTTGAACAATTTGATGCACTCTGCCAACGAAATAGTGTTGGTCCAGGAAGTATAATAATCATCACAACCAGAGATCTGCGTGTACTTAATATCCTTGAAGTTGATTTTATCTATGAAGCAGAGGAATTGAATGCTAGTGAGTCCCTTGAGCTTTTCTGTAAACATGCTTTTCGGAAGGCGATTCCAACACAAGACTTCCTTATTCTCTCAAGAGATGTAGTTGCCTATTGTGGTGGAATACCACTAGCTCTTGAAGTCCTTGGATCTTACTTGTTCAAGAGGAAAAAACAAGAGTGGCGGAGTGTATTATCAAAGCTAGAAAAGATACCCAATGATCAAATACACGAGATACTAAAAATAAGCTTTGATGGTTTAAAGGATCGTATGGAAAAGAATATATTTCTTGATGTCTGCTGTTTCTTTATCGGTAAGGATAGAGCTTATGTTACAAAGATACTAAATGGTTGTGGACTTAATGCTGATATTGGAATAACAGTGTTGATAGAGAGAAGCCTCATAAAAGTTGAAAAGAATAAAAAGCTTGGAATGCATGCTTTGCTACGAGACATGGGAAGGGAAATTGTTCGTGAAAGTTCACCGGAGGAGCCTGAAAAGCATACCCGATTGTGGTGCCATGAGGACGTAGTTAATGTACTGGCAGACTATACCGGAACAAAAGCCATCGAGGGATTGGTTATGAAGTTGCCAAAGACCAATAGAGTTTGCTTTGATACAATTGCTTTTGAGAAAATGATTAGATTGAGATTGTTGCAACTTGATAATGTACAAGTCATCGGAGATTACAAGTGTTTTCCAAAGCATCTGAGATGGCTTTCTTGGCAAGGATTTCCATTAAAATACACCCCAGAAAACTTTTATCAGAAAAATCTAGTAGCTATGGAGTTAAAACACAGTAATCTCGCACAAGTCTGGAAGAAGCCTCAGTTGATAGAGGGGCTGAAGATCCTAAATCTCAGTCATTCTAAGAACTTGAAAAGAACCCCTGACTTTTCAAAATTACCAAACCTAGAAAAGCTAATTATGAAGGATTGTCAAAGTTTGCTGGAGGTACACCCGTCCATTGGAGATCTCAAGAATCTTCTTATGTTAAATTTGAAGGACTGTACGAGTCTTGGCAATCTCCCAAGAGAGATCTATCAATTGAGAAGAGTGGAAACTCTCATCCTTTCTGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATAGTGCAAATGGAATCCTTGACAACTCTAATGGCAGCAAATACTGGAGTCAAACAACCACCATTTTCGATAGTGAGATCAAAAAGCATTGGATATATATCTCTATGTGGATATGAAGGATTATCACATCATGTTTTTCCTTCTCTCATTAGGTCTTGGATATCACCAACAATGAATTCCTTACCACGCATTCCCCCTTTTGGTGGCATGTCAAAGTCTCTTTTTTCCTTGGATATAGATAGCAATAATCTGGCTTTGGTCTCTCAATCACAAATACTTAACAGTTGTTCAAGACTTAGAAGTGTTTCGGTACAATGTGATTCAGAGATTCAACTGAAGCAAGAATTCGGAAGATTTCTTGATGATCTATATGATGCAGGTCTTACTGAAATGAGAACATCACATGCATTACAAATTTCGAATCTTACCATGAGATCCCTTTTGTTTGGTATCGGAAGTTGCCACATTGTCATCAACACTCTTCGCAAGAGCTTATCACAGGGATTGGCAACCAATTTTGGTGATTCTTTCCTTCCGGGTGACAATTATCCTTCTTGGCTAGCCTATAAAGGTGAAGGACCTTCAGTACTTTTCCAAGTGCCCGAGGATCGTGATTCTTGCATGAAGGGAATAGCTTTATGCGTTCTTTATTCATCAACACCTGAAAATTTGGCAACTGAAAGTCTCGCTAGCGTCTTGATCATTAATTACACAAAATTCACTATGCAGATTTACAAACGAGACACAATAATGTCGTTTAATGATGAAGATTGGCAAGGCATAGTGTCAAATTTAGGAGTTGGTAACAATTTGGAGATTTTTGTAGCTATTGGGCATGGATTTACTGTTAAGGAAACTGCTGTTTATCTAATATATGATCAATCTATTGCTACGGAAGTTGAGCCTTCAAGTACTATTGAAGTTGACCCATCAACTAGCACAAATATTGAGCCATTGTATGAAGTGGAAGTGCAATCATCACTTAGTGTGAAATTGGAGGCATCGATCGAAGAGCAACTACAACCATCACTTGATGTGAAAACAGAGCCATCAGCTGAAGAGGATGTGCAACCATCTCCTAATGTGAAAACAGAACCATCAGCTGAAGAGGAAGTACAACCATCACCCAATGTGAAAATGGAACCATCACTTGTTGTCAAGAATGAACCATTACCAAACACAAATAGAAAAATCTTTACAAGACTTGCAAAGAGAGTGGGAGAATGTTTATGCATGAACCAGAATGTTTATGCTTAA	3381	0.3807	MDMRNPRSKPQSKWTYDVFINFRGADTRKTFISHLYTALTNAGINTFLDNENLQKGKELGPELIRAIQGSQIAIVVFSKNYVHSRWCLSELKQIMECKANDGQVVMPVFYCITPSNIRQYAVTRFSETTLFFDELVPFMNTLQDASYLSGWDLSNYSNESKVVKEIVSQVLKNLDNKYLPLPDFQVGLEPRAEKSIRFLRQNTRGVCLVGIWGMGGIGKSTIAKVIYNDLCYEFENQSFLANIREVWEKDRGRIDLQEQFLSDILKTRKIKVLSVEQGKTMIKQQLRAKRILAVLDDVSELEQFDALCQRNSVGPGSIIIITTRDLRVLNILEVDFIYEAEELNASESLELFCKHAFRKAIPTQDFLILSRDVVAYCGGIPLALEVLGSYLFKRKKQEWRSVLSKLEKIPNDQIHEILKISFDGLKDRMEKNIFLDVCCFFIGKDRAYVTKILNGCGLNADIGITVLIERSLIKVEKNKKLGMHALLRDMGREIVRESSPEEPEKHTRLWCHEDVVNVLADYTGTKAIEGLVMKLPKTNRVCFDTIAFEKMIRLRLLQLDNVQVIGDYKCFPKHLRWLSWQGFPLKYTPENFYQKNLVAMELKHSNLAQVWKKPQLIEGLKILNLSHSKNLKRTPDFSKLPNLEKLIMKDCQSLLEVHPSIGDLKNLLMLNLKDCTSLGNLPREIYQLRRVETLILSGCSKIDKLEEDIVQMESLTTLMAANTGVKQPPFSIVRSKSIGYISLCGYEGLSHHVFPSLIRSWISPTMNSLPRIPPFGGMSKSLFSLDIDSNNLALVSQSQILNSCSRLRSVSVQCDSEIQLKQEFGRFLDDLYDAGLTEMRTSHALQISNLTMRSLLFGIGSCHIVINTLRKSLSQGLATNFGDSFLPGDNYPSWLAYKGEGPSVLFQVPEDRDSCMKGIALCVLYSSTPENLATESLASVLIINYTKFTMQIYKRDTIMSFNDEDWQGIVSNLGVGNNLEIFVAIGHGFTVKETAVYLIYDQSIATEVEPSSTIEVDPSTSTNIEPLYEVEVQSSLSVKLEASIEEQLQPSLDVKTEPSAEEDVQPSPNVKTEPSAEEEVQPSPNVKMEPSLVVKNEPLPNTNRKIFTRLAKRVGECLCMNQNVYA*	1127

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g0297	1126	Pfam	NB-ARC domain	196	412	IPR002182	GO:0043531
	Mtr8g0297	1126	Pfam	TIR domain	16	176	IPR000157	GO:0007165
	Mtr8g0297	1126	Gene3D	-	9	174	IPR035897	-
	Mtr8g0297	1126	Gene3D	Ribonuclease Inhibitor	497	830	IPR032675	-
	Mtr8g0297	1126	PRINTS	Disease resistance protein signature	208	223	-	-
	Mtr8g0297	1126	PRINTS	Disease resistance protein signature	285	299	-	-
	Mtr8g0297	1126	PRINTS	Disease resistance protein signature	377	391	-	-
	Mtr8g0297	1126	PRINTS	Disease resistance protein signature	662	678	-	-
	Mtr8g0297	1126	SUPERFAMILY	L domain-like	483	812	-	-
	Mtr8g0297	1126	ProSiteProfiles	TIR domain profile.	14	174	IPR000157	GO:0007165
	Mtr8g0297	1126	MobiDBLite	consensus disorder prediction	1050	1098	-	-
	Mtr8g0297	1126	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	19	1001	-	-
	Mtr8g0297	1126	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	176	436	IPR027417	-
	Mtr8g0297	1126	MobiDBLite	consensus disorder prediction	1062	1079	-	-
	Mtr8g0297	1126	Gene3D	-	342	426	IPR042197	-
	Mtr8g0297	1126	Gene3D	-	175	336	IPR027417	-
	Mtr8g0297	1126	SMART	till_3	15	148	IPR000157	GO:0007165
	Mtr8g0297	1126	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	19	1001	IPR044974	GO:0006952
	Mtr8g0297	1126	SUPERFAMILY	Toll/Interleukin receptor TIR domain	8	139	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g0297	Mtr-Chr8	3275439	3281163	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr8g0297	5	707	WRKY Transcription Factor Family	AT4G12020	31.129	9.41e-83	295

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g0297	-		-	mtr:MTR_8g011710	1666.36