Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0293 ATGGGAGCTAAATTGTTTGGTCCGGGAAGTGTATTAATAATTACAACCAGAGATGTACGCGTGCTTAATTTAGTTAAGGTTGACTATGTATGTACAATGAAGGAAATGGACGAAAAGGAGTCCCTTGAGCTTTTCAGTTGGCATGCTTTTAGACAACCTAGTCCGATACAAGACTACTGTAAACTCTCCAAAAAAGTAGTTGCTTATTGTGGAGGATTACCAGTTGCTCTTGAAGTCCTTGGTTCATACTTATATGAGAGGACAAAACAAGAATGGATAAGTGTACTCTTGAAATTAGAGAGAATTCCCAATGATCAAGTGCAAGAGAAACTGAGAATTAGCTACGATGGTTTAAAGGATGATATGGAAAAAGATATATTTCTTGACATATGTTGTTTCTTTATAGGCAAGGATAGAGCCGAAGTTACAGAGATACTAAATGGCTGTGGACTTTATGCAAATATTGGAATAAGTGTTCTCATAGAGCGGAGCCTTGTAAAAATTGAAAAGAATAACAAGCTTGGAATGCATTGTTTGATAAGAGACATGGGAAGAGAAATTATTCGTGAAAGTTCTGCAAAAGAGCCTGGGAAGCGTAGTAGATTGTGGTTTCATGAGGATGTGCATGACATTTTGACAAAACATACTGTAAGAACTTTTCCGTATTAA 669 0.3662 MGAKLFGPGSVLIITTRDVRVLNLVKVDYVCTMKEMDEKESLELFSWHAFRQPSPIQDYCKLSKKVVAYCGGLPVALEVLGSYLYERTKQEWISVLLKLERIPNDQVQEKLRISYDGLKDDMEKDIFLDICCFFIGKDRAEVTEILNGCGLYANIGISVLIERSLVKIEKNNKLGMHCLIRDMGREIIRESSAKEPGKRSRLWFHEDVHDILTKHTVRTFPY* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0293 222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 130 IPR027417 -
Mtr8g0293 222 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 215 - -
Mtr8g0293 222 Gene3D - 35 119 IPR042197 -
Mtr8g0293 222 Pfam NB-ARC domain 10 110 IPR002182 GO:0043531
Mtr8g0293 222 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 215 IPR044974 GO:0006952
Mtr8g0293 222 SUPERFAMILY "Winged helix" DNA-binding domain 106 212 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0293 Mtr-Chr8 3200826 3201494 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0293 2 203 WRKY Transcription Factor Family AT5G45050 39.409 3.95e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0293 - - cam:101511388 363.614