LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g0290	ATGTCAATGGATGATGATGATGATGATGATGATTCTTGTTCTTCTTATTCTTATTCTTACTCTTATTCTTCTTGTTCATCCTTAAACTTCGACCATCGATGGTTCTACGATGTTTTCATCAGTTTCAGAGGAGAAGACATTGGCAAGAGTTTCGTTTCACATCTAGTTAATGCCCTTAGAAAAGCCAGAATCACCACTTACATCGACGGTGGTCAGCTTCACACCGGAACCGAGCTGGGACCAGGACTATTGGCAGCAATTGAAACGTCTAGTATATCAATCATTGTTTTCTCCAAAAACTACACTGAATCTAGTTGGTGTCTTGACGTGCTGCAAAATGTCATGGAGTGCCACATAAGTGATGGCCAACTGGTTGTTCCTGTGTTTCATGATGTTGATCCGTCCGTTGTGCGCCACCAGAAGGGTGCTTTTGGACAAGTTCTGAGAGATACTGCAAAAAGAACCTCAAGGAAGGGAGAGATAGAAGATGTGGTGTCTAGTTGGAAGAATGCACTAGCAGAAGCCGTCAGTATTCCTGGTTGGAATGCCATCAGTTTCAGGAATGAAGACGAACTTGTGGAGCTAATTGTTGAGGACGTTTTGAGAAAGCTAAACAAGAGATTATTGTCTATTACCAAATTTCCAGTTGGATTGGAGTCCCGGGTGCAACAAGTGATTCAGTTTATTCAAAATCAATCAAGCAAAGTTTGTTTGACAGGGATCTGGGGAATGGGTGGGTCGGGGAAAACAACAACAGCCAAAGCTATCTTCAATCAAATTAATTTGAAATTTATGCATGCAAGTTTCATTGAAAATATTAGAGAAGTTTGTATAAAAAATGATAGAGGGATTATACATTTACAACAACAACTTCTTTCCGATGTCATGAAAACAAATGAGAAGGTATATAACATTGCAGAGGGGCAAATGATGATCAATGAAAGATTCCGGGGGAAAAATGTATTCGTTGTACTTGATGATGTGACCACATTTGAACAGTTAAAAGCCCTATGTGCAAATCCTGAATTCTTTGGTCCAGGAAGTGTATTAATTATTACAACTAGAGATGTACACCTACTTGATTTATTTAAGGTTGACTATGTGTGTAAAATGAAGGAAATGGATGAAAATGAGTCCCTTGAGCTTTTCAGCTGGCATGTTTTTAGACAACCTAATCCAAGAGAAGACTTCAGTGAATTCTCAAAGAGGGTAGTTTCTTATTGTGGAGGATTACCACTAGCTCTAGAAGTCATTGGTTCTTACTCAAATCAGATGACAGATGAAGATTGGATAAGTGTATTCTCAAATCCAAAGACAATTCCCAATCATCAAATCCAAGAAAAACTGAGAATAAGCTATGATGGGTTAAATCAAGATATGGAAAAGGATATATTTCTTGACATTTGTTGTTTCTTTATTGGTAAGGACAGAACCTATGTCACAGAGATACTAAATGGCTGTGGACTTGATGCTGACACTGGAATAACAGTCCTCGTAGAGCGGAGCCTCCTAAAAGTTGACAATTATAACAAGCTTGAAATGCATGATTTAATAAGAGATATGGGAAGAGAAATTGTTCGTGAAAGTTCAGCAAAAGAACCAGGGAAGCGCAGTCGATTGTGGTTTCATGAGGATGTACATGATATTTTGACCACAAATTCTGGAACAGAAACTGTAGAGGGATTGGTTTTGAAGTCGCAAAGAACTGGCAGAGTTTGCTTCAGTACGAATTCTTTCAAGAAGATGAACCAACTCAGACTTCTGCAACTTGATTGTGTTGACCTCACTGGAGATTATGGAAACCTTTCTAAAGAACTTAGATGGGTCCATTGGCAAGGATTTACCTTCAACTGTATACCTGATGACTTTCATCAAGGAAATCTAGTTGTTTTTGAATTAAAACACAGCAACATTAAACAAGTATGGAATAAAACCAAGTTGCTAGTGAATCTAAAAATTCTCAATCTAAGTCATTCGAGATACTTGACAAGCTCCCCGGATTTTTCAAAATTACCAAATCTTGAAAAGCTCATTATGAAGGATTGTCCAAGTTTGTCTGAGGTACACCCATCCATTGGAGATCTCAATAAACTTCTTATGTTAAATTTGAAGGACTGTATAGGTCTTAGCAATCTCCCAAAGAGTATCTATCAACTGAAATCTTTGAACACTCTCATCCTTTCTGGTTGTTCAAAGATTGACAAGTTGGAAGAAGACATAGTGCAGATGGAATCCTTGACAACACTGATTGCAAATAATACAGCTGTTAAAGAAGTGCCCTTTTCAATTGTAAGATCAAAAAGCATCAGATATATATCCCTATGTGGATATGAAGGATTATCACATGATGTTTTTCAATCTCTCATTAGGTCTTGGATGTCACCAACACTGAATTCTCTACCCTGTATTTTCCCGTTTAGGAACATTACATACTATTGTCTAGCTTCTCACGATGTACATCAAAATAACTTGGTCTTTCTATCACCAATTGATAGCATCCTTTTACAGCTTAGAATTATTGGGGTACAATTCCGCTCAGAGATTCAACTTACTCAAGAACTACGGGGAATTCTTGATGATCAATATGATATTAGTGTTACCAAAGTGGAAACATCACATGCATCACAAATCTCAAATCCTTCTTTGAGATCACTTTTGATTGGAATGGGAAATTTCCACATATTCATTGAGGCTCTTAGCAAGAGCATATCACAGGGATTAACAACCAATGACTCTGGGGAATTTTTCCTTCCGGGGGACAACTATCCTTCTTGGTTAGCCTACACAGGTGAAGGACCTTCTGTACGTTTTCAAGTGCCCAAGGATAGTGATCACTGCATAAAGGGAATAACTTTATGTGTTGTTTATTCATCAACAATATCTGAAAACATGGTAACTGAATGTCTCGCTAGTGTTTTGATAATTAATTATACAAAATTCACTGTTCACATATACAAGCGAGATACAATAATGTCCTTTAATGATGAAGATTGGAAGAACATAACATCAAATCTAGGACCTGGTGACAATGTGGAGATATTTGTAGCTTTTGGGCATGAGTTGATTGTTAAGGAGACAGCTGCCTATCTTATATATAACCACTCAGTTACTAAGGAAATTGAGTCATCAACTAATGCTCATGAGAAATATGATTTGAAGTATGATGTTGATGCTAAGTTCAAAGGTGGTCCTAGAAGGTATCAATGGGAAATGGACAAAGCAAGCAAAAGAGACGTGAAAAGTCTGAATCAATCAAAGATTGCTGATGAGAAAGGGGATTTGGTGAATGGTGTCAACAGAAGGATGGCCGAGCAAATTCCATACGCTGTTGCTGAAAGCCTCTTTAACAGGTTGGCTTCTGCAGCCTTTCGTGAACATGGACGAATTTTTGGTGTTATGGATGAGTTAGAAAGACTTAAGAAGTCTGTTGAATGCATAAGAGTTGTTCTGCTTGATGCCCAAGAGAAACAGGAACAAAATTGGATAGGAAGGCTCAAAGATGTGCTTCATCTTGCAGATGACTTGCTAGATGAATTCATTATTGAAGGTATGAGATATAAAGTGGATGCAGGTGATAAGAAAAAGATTACATGGGTATTTCGTTCATTATCTTCAACGCATTTTTATCTTAGATGA	3636	0.3768	MSMDDDDDDDDSCSSYSYSYSYSSCSSLNFDHRWFYDVFISFRGEDIGKSFVSHLVNALRKARITTYIDGGQLHTGTELGPGLLAAIETSSISIIVFSKNYTESSWCLDVLQNVMECHISDGQLVVPVFHDVDPSVVRHQKGAFGQVLRDTAKRTSRKGEIEDVVSSWKNALAEAVSIPGWNAISFRNEDELVELIVEDVLRKLNKRLLSITKFPVGLESRVQQVIQFIQNQSSKVCLTGIWGMGGSGKTTTAKAIFNQINLKFMHASFIENIREVCIKNDRGIIHLQQQLLSDVMKTNEKVYNIAEGQMMINERFRGKNVFVVLDDVTTFEQLKALCANPEFFGPGSVLIITTRDVHLLDLFKVDYVCKMKEMDENESLELFSWHVFRQPNPREDFSEFSKRVVSYCGGLPLALEVIGSYSNQMTDEDWISVFSNPKTIPNHQIQEKLRISYDGLNQDMEKDIFLDICCFFIGKDRTYVTEILNGCGLDADTGITVLVERSLLKVDNYNKLEMHDLIRDMGREIVRESSAKEPGKRSRLWFHEDVHDILTTNSGTETVEGLVLKSQRTGRVCFSTNSFKKMNQLRLLQLDCVDLTGDYGNLSKELRWVHWQGFTFNCIPDDFHQGNLVVFELKHSNIKQVWNKTKLLVNLKILNLSHSRYLTSSPDFSKLPNLEKLIMKDCPSLSEVHPSIGDLNKLLMLNLKDCIGLSNLPKSIYQLKSLNTLILSGCSKIDKLEEDIVQMESLTTLIANNTAVKEVPFSIVRSKSIRYISLCGYEGLSHDVFQSLIRSWMSPTLNSLPCIFPFRNITYYCLASHDVHQNNLVFLSPIDSILLQLRIIGVQFRSEIQLTQELRGILDDQYDISVTKVETSHASQISNPSLRSLLIGMGNFHIFIEALSKSISQGLTTNDSGEFFLPGDNYPSWLAYTGEGPSVRFQVPKDSDHCIKGITLCVVYSSTISENMVTECLASVLIINYTKFTVHIYKRDTIMSFNDEDWKNITSNLGPGDNVEIFVAFGHELIVKETAAYLIYNHSVTKEIESSTNAHEKYDLKYDVDAKFKGGPRRYQWEMDKASKRDVKSLNQSKIADEKGDLVNGVNRRMAEQIPYAVAESLFNRLASAAFREHGRIFGVMDELERLKKSVECIRVVLLDAQEKQEQNWIGRLKDVLHLADDLLDEFIIEGMRYKVDAGDKKKITWVFRSLSSTHFYLR*	1212

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g0290	1211	ProSiteProfiles	TIR domain profile.	34	204	IPR000157	GO:0007165
	Mtr8g0290	1211	Gene3D	Ribonuclease Inhibitor	558	904	IPR032675	-
	Mtr8g0290	1211	SUPERFAMILY	Toll/Interleukin receptor TIR domain	30	181	IPR035897	-
	Mtr8g0290	1211	Gene3D	-	33	206	IPR035897	-
	Mtr8g0290	1211	Pfam	Rx N-terminal domain	1112	1187	IPR041118	-
	Mtr8g0290	1211	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	38	1034	IPR044974	GO:0006952
	Mtr8g0290	1211	PRINTS	Disease resistance protein signature	238	253	-	-
	Mtr8g0290	1211	PRINTS	Disease resistance protein signature	315	329	-	-
	Mtr8g0290	1211	PRINTS	Disease resistance protein signature	408	422	-	-
	Mtr8g0290	1211	PRINTS	Disease resistance protein signature	717	733	-	-
	Mtr8g0290	1211	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	38	1034	-	-
	Mtr8g0290	1211	SMART	till_3	35	178	IPR000157	GO:0007165
	Mtr8g0290	1211	Pfam	NB-ARC domain	219	436	IPR002182	GO:0043531
	Mtr8g0290	1211	Gene3D	-	373	457	IPR042197	-
	Mtr8g0290	1211	Gene3D	-	1111	1210	-	-
	Mtr8g0290	1211	Pfam	TIR domain	36	212	IPR000157	GO:0007165
	Mtr8g0290	1211	Gene3D	-	207	367	IPR027417	-
	Mtr8g0290	1211	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	206	468	IPR027417	-
	Mtr8g0290	1211	SUPERFAMILY	L domain-like	529	843	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g0290	Mtr-Chr8	3157392	3164297	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr8g0290	36	763	WRKY Transcription Factor Family	AT4G12020	30.841	1.00e-81	293

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g0290	-		-	mtr:MTR_8g011850	2347.01