Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0288 ATGTCTTCTTCATCCTCCTCCACTCCTCAATGGGTATACGACGTGTTCCTCAACTTCAGGGGGGAAGACACTCGTTCCAGTTTCGTTTCTCATCTCCATGCAGCACTCTCAAATGCTGGAATCAACACTTTTCTTGACGACAAAAAGCTTGAAAAGGGAGAGGAGCTGGGACCAGAACTGTTGCGAGCAATAGAAGTTTCTCGTATTTCTATCATTGTTTTCTCCAAAAGCTATATCACATCTAGTTGGTGTCTTAAAGAGCTTGAACAAATTATGAAATGCCGCAAAAATTATGGACAGGTGGTTATGCCCATATTTTACCACGTTGACCCATCGGCTTTGCGTCATCAGAAAGATGGTTATGGAAAAGCTTTGCAAGCAACTGCAAAAAGAAGACCCTCTGGAGGCGAAAGGAGGAAATATGCTTTGTCCAATTGGAAGATTGCACTAACCGAAGCTGCAAATATATCTGGTTGGGATATCAACAAATCCAGCAACGAAGGTGAACTAATGCCTCTGATTATTGAGGACGTCAGGAGAAAATTAAACAGCAGATTAATGTCTATTACTGAATTTCCAGTTGGATTGCACACACGTGTGCAACAAGTGATTCAGTTTATTGAAAAACAATCAAGCAAAGTTTGCATGATAGGGATCTGGGGTATGGGTGGATCAGGTAAAACAACAACAGCCAGAGATATCTACAACAAAATTCATCGCAAATTTGTAGATCACAGTTTCATTGAAAATATTAGAGAAGTTTATGAAAAGGAAAATAGAGGGATTACTCATTTACAAGAACAACTTCTTTCTAATGTCTTGAAAACAATTGAGAAGAGATTTATGAGGAAAAAGACACTCATTGTACTCGATGACGTGAGCACATTAGAGCAAGTAGAAGCCCTATGTATAAATTGTAAATGTTTTGGTGCGGGAAGTGTATTGATTGTTACATCTAGGGATGTACGCATACTTAAGTTACTTAAAGTTGACCGTATCTATAACATAAAGGAAATGGATGAAAACAAGTCCCTTGAGCTTTTCTGTTGGCATGCTTTTAGAGAACCAAGTCCGAAAGGAGACTTCAGTGAACTCTCAAGAAGAATAGTTGTTTACTGTAGAGGATTACCACTGGCTCTTGAAGTCATTGGATCTTACTTGCGTGACAGGACAATACAAGAATGGATAAGTGTATTATCAAAGTTAGAGAGAATACCCGATGATAAAGTGCATGAGAAACTAAGAATAAGCTATGATGGTTTAAAGAATGATACAGAAAAGGATATATTTCTTGACATATGTTGTTTCTTTATTGGTAAGGACAGAGCATATGTTTCAGAGATTATAGATGGTTGTGACTTTTATGCTGGTATTGGAATAACTGTCCTCATAGAGAGAAGCCTCCTAAAAATTGAAAAGAGTAACAAACTTGGAATGCATAGTTTGCTAAGAGACATGGGAAGAGAGATTGTTCGTAAAAGATCAATAAAAGAGCCTGGGAAGCGTAGTCGATTGTGGTTTCACAAGGATGCACATAAAGTATTGACAGAAAAGACGTTCCCCTTCCAATCTCTATTTTTTCTTCACATACATGGAACAGAAACTGTGGAAGGATTGGTTTTGATGTCGCAAAACACCAACGATGTTTGCATCGAGACTAATACCTTCAAGGAGATGAAGAATTTGAGACTTTTAAAACTTCATCATGTTGATCTTACTGGAGCTTTTGGGTTTCTTTCTAAAGAATTGAGATGGCTCCATTGGCAGGGATTTACTCATGAATATATACCTGATGACTTTTTTTTGGGAAATCTAGTTGTTTTTGAGTTGAAACACAGCAATATTAAACAAGTTTGGAATGAAACCAAGTTGATGAAGAACCTGAAAATTCTCAATCTCAGTCATTCCAAGTACTTGACAAGCACTCCTGACTTTTCAAAATTACCGAATCTAGAAAAGCTCATTATGAAGGACTGTCCAAGCTTGTCTGAGGTACACCAGTCAATTGGGGGTCTGAGGAATCTTCTTCTGATAAATTTGAAAGATTGTACAAGTCTTAGCAATCTCCCAAAGAAGATAAATCAATTGAAGTCTTTGACAACTCTCATCATTTCTGGTTGTTCAAAGATTGACAAGTTAGAAGAAGGCATAGTGCAGATGGAATCCTTAACAACACTGGTCATAAAAGATACAGGTGTGAAAGAGGTGCCGTATTCAGTGGTAAGATTGAAAAGCATCGGATATATATCTCTATGTGGATATGAAGGATTATCAGAAGATGTTTTTCATTCTATTATTCAGTCTTGGATGTCACCAACAATGAATAATTTGCCCCATAATAACCTGGACTTTCTAAAACCAATAGTTAAGAGCCTTGCACAACTCAGAACTGTTTGGATACAATGCCACTCAAAGAATCAACTAACTCAAGAATTAAAAATAATTTTTGATGATCAATATTATATTAATTGTACTGAATCCGAAGCATTGCAAATCCCAAATACTTCCTCGAGATCGCAGTTAATTGGAATGGGAAGTTGTCGCACAGTCGTGTATACTCTTGGCAACAGCATGTCACAGGGATTAACAATCAACGATTCGGGCAATTTTTTCCTTCCGAGCGGCAATTATCCTTCTTGCTTAGTCTATACAAGTGAAGGACCTTCAACACCATTTCAAGTTCCTAAGGATATTGATTGTTACATGGAGGGAATAGTCTTATGCGTTGTTTATTCATCAACATCTGAAAACATGGCAGGTGAATGTCTCACTAGTGTCTTGATTATTAATTACACAAAGTGCACCATCCAAATTTACAAGCGAGACACTGTAGTGTCCTTTAATGATGAAGATTGGAAGAATGTAACATCAAATCTAGGACCTGGTGATGATGTGAAGATTTATGTAGCTTTTGAGCATGGATTGATTGTTAAGAAAACAACAGTTTATCTAATATCTGGCCAGTCGATTATTATGGAAGTGGATGAAGCTAACATGGAAATGGAGCCATCGGAGGAAGTGAATGTGCAGCCGTCCCATGAAGCGAATGTGCAGTCATCACCTATCATGAAAATGAAGCAATTATCAAAGCCCAATAAAAGTATATTTGCGAGTATTCCGAACAAAATGGGTGCATTTTTCTGCTTGAACAACGTTGACTTCAATTCCTGGCTTTCCTGTGGAATCAAATTAATGGATTCTTCTTCATCGTCCTCCAATCCTCGATGGATACACGACGTGTTCATTAGTTTTAGAGGAGAAGATACTCGTAAGACGTTCGTTTCTCATCTATATGCTGCCCTCACAAATGCTGGAATCAACACTTACACAGACAGCCAACTTCACAAGGGAGTGGAGCTAGGACCAGAATTGTCCCAAGGAATAGAATGGTCTCATATATCCATTGTTGTTTTCTCCAAAAGATATACCGAATCTTGTTGGTGTCTTAACGAATTGAAAAAGATCATGGAATGCTACAGAACTCATGGCCATGTGGTTGTCCCAGTATTTTACGATGTTGATCCATCTGTTGTGCGCTACCAGAAGGGCGATTTCGGGAAAGCTTTGCTATCAACAGCAAAAAAAATATACTTTCACTCGGGAGAGGAAAGGCTGGAATATGTTCTGTCTAGGTGGACGAGTGCACTCACCGAAGCTGCTAATTTGGCTGGTTGGGACGTCAACAATTGCAGGAATGAAGGTGAACTAATGCAGCAAATTGTGGCGGACGTTTTGGAAAAACTAGATAGTGCATTCTTGCCCATTACCGGATTGGAAAAACTAAATTGTGGCGGACGTTTTGGAAAAACTAATGCAGCAAATTATGCTCACTTTGAGTACTATCTTGTGATTGAGTTTATTGTAACTCAGCCGAGCAAAGTTTGTATGATGGGAATATGGGGAATGGGTGGGTTGGGTAAAACAACCACAGCCAAAGCCGTCTACAACCAAATCCATCGCAAATTTGAGGATAAAAGTTTCATCGAAAATATTAGAGAAGTTTATGAAAAATATAGTACTGGGATTATTCATTTACAACAGCAACTTCTTTCAGATATCTTGAATTCAAAGGAGATTATACATAGCATTGCATCGGGGACCTCTACGATAGAGAGAAGACTTCAAGGGAAAAGGGCGCTTGTTGTGCTTGATGATGAAATGAACGAAAGGGAGTCCCTTGAGCTTTTCAGTTGGCATGCTTTCAGACGACCTATTCCAATAAAAGACTTCAGTGAACTCTCAAGAAACGTAGTTGCTTATTGCAGAGGATTACCACTGGCTCTGGAAGTCCTAGACAGAGCTTACGTAACAGAGATACTTAATGGCTGTGGACTTCATGCTGTTATTGGAATAGCGATCCTCATAGAACGGAGCCTTGTAAAAATGGAAAAGAATAACAAAATTGGAATGCATGATTTAATAAGAGACATGGGAAGAGAAATTGTTTGTGAAAGTTCAACAAAAGAGCCTGGAAAGCTTAGTCGACTATGGTTTCACCAGGATGCACATGATATTTTGACCAAAAATTCTGGAACAGAAACTGTAGAGGGATTGATTTTGAGGTTTGAAAGAACCAGCAGAGTTTGCTTCAGTGCTGATTCTTTCAAGGAAATGAAGAATCTGAGACTTCTACAACTTGATAATGTGGACCTGACTGGAGATTATGGGTATCTTTCTAAAGAACTGAGATGGGTCCATTGGCAGAAAAGTAGAATTTTAACATTTATCTTCTTGCAGTTGCTATGGAATCTGAAAATTCTAAATCTGAGTTATTCCAAGTATTTAAAAACCACTCCAGACTTTTCAAAATCACCGAATCTAGAAAAGCTCATCATGAAGAATTGTCCATGCTTGTCTAAGGTACACCAGTCCATTGGAGATCTCAATCGTCTTCATATGATAAATTTGAAGGACTGTAGAAGTCTTCAAAATCTCCCAAAGAATATATACCAATTGAAATCTTTGAAAACTCTCATACTTTCTGGTTGCTCAAAGATTGACAAATTGGAAGAAGACATAGTGCAGATGGAATCCTTGACAACACTGATTGCAAAGGATACAGGTGTGAAAGAGGTGCCCTATTCAATAGTAAGATCAAAAAGCATTGGATATATATCCCTATGTGGATATGAGGATTTTCACGTGATGTTTTTCCCTCTATCATTTGGTCTTGGATGTCACCAACCATGA 5190 0.3825 MSSSSSSTPQWVYDVFLNFRGEDTRSSFVSHLHAALSNAGINTFLDDKKLEKGEELGPELLRAIEVSRISIIVFSKSYITSSWCLKELEQIMKCRKNYGQVVMPIFYHVDPSALRHQKDGYGKALQATAKRRPSGGERRKYALSNWKIALTEAANISGWDINKSSNEGELMPLIIEDVRRKLNSRLMSITEFPVGLHTRVQQVIQFIEKQSSKVCMIGIWGMGGSGKTTTARDIYNKIHRKFVDHSFIENIREVYEKENRGITHLQEQLLSNVLKTIEKRFMRKKTLIVLDDVSTLEQVEALCINCKCFGAGSVLIVTSRDVRILKLLKVDRIYNIKEMDENKSLELFCWHAFREPSPKGDFSELSRRIVVYCRGLPLALEVIGSYLRDRTIQEWISVLSKLERIPDDKVHEKLRISYDGLKNDTEKDIFLDICCFFIGKDRAYVSEIIDGCDFYAGIGITVLIERSLLKIEKSNKLGMHSLLRDMGREIVRKRSIKEPGKRSRLWFHKDAHKVLTEKTFPFQSLFFLHIHGTETVEGLVLMSQNTNDVCIETNTFKEMKNLRLLKLHHVDLTGAFGFLSKELRWLHWQGFTHEYIPDDFFLGNLVVFELKHSNIKQVWNETKLMKNLKILNLSHSKYLTSTPDFSKLPNLEKLIMKDCPSLSEVHQSIGGLRNLLLINLKDCTSLSNLPKKINQLKSLTTLIISGCSKIDKLEEGIVQMESLTTLVIKDTGVKEVPYSVVRLKSIGYISLCGYEGLSEDVFHSIIQSWMSPTMNNLPHNNLDFLKPIVKSLAQLRTVWIQCHSKNQLTQELKIIFDDQYYINCTESEALQIPNTSSRSQLIGMGSCRTVVYTLGNSMSQGLTINDSGNFFLPSGNYPSCLVYTSEGPSTPFQVPKDIDCYMEGIVLCVVYSSTSENMAGECLTSVLIINYTKCTIQIYKRDTVVSFNDEDWKNVTSNLGPGDDVKIYVAFEHGLIVKKTTVYLISGQSIIMEVDEANMEMEPSEEVNVQPSHEANVQSSPIMKMKQLSKPNKSIFASIPNKMGAFFCLNNVDFNSWLSCGIKLMDSSSSSSNPRWIHDVFISFRGEDTRKTFVSHLYAALTNAGINTYTDSQLHKGVELGPELSQGIEWSHISIVVFSKRYTESCWCLNELKKIMECYRTHGHVVVPVFYDVDPSVVRYQKGDFGKALLSTAKKIYFHSGEERLEYVLSRWTSALTEAANLAGWDVNNCRNEGELMQQIVADVLEKLDSAFLPITGLEKLNCGGRFGKTNAANYAHFEYYLVIEFIVTQPSKVCMMGIWGMGGLGKTTTAKAVYNQIHRKFEDKSFIENIREVYEKYSTGIIHLQQQLLSDILNSKEIIHSIASGTSTIERRLQGKRALVVLDDEMNERESLELFSWHAFRRPIPIKDFSELSRNVVAYCRGLPLALEVLDRAYVTEILNGCGLHAVIGIAILIERSLVKMEKNNKIGMHDLIRDMGREIVCESSTKEPGKLSRLWFHQDAHDILTKNSGTETVEGLILRFERTSRVCFSADSFKEMKNLRLLQLDNVDLTGDYGYLSKELRWVHWQKSRILTFIFLQLLWNLKILNLSYSKYLKTTPDFSKSPNLEKLIMKNCPCLSKVHQSIGDLNRLHMINLKDCRSLQNLPKNIYQLKSLKTLILSGCSKIDKLEEDIVQMESLTTLIAKDTGVKEVPYSIVRSKSIGYISLCGYEDFHVMFFPLSFGLGCHQP* 1730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0288 1729 Gene3D Ribonuclease Inhibitor 1492 1713 IPR032675 -
Mtr8g0288 1729 Gene3D - 1072 1254 IPR035897 -
Mtr8g0288 1729 Pfam TIR domain 1078 1250 IPR000157 GO:0007165
Mtr8g0288 1729 Pfam TIR domain 13 189 IPR000157 GO:0007165
Mtr8g0288 1729 ProSiteProfiles TIR domain profile. 1076 1248 IPR000157 GO:0007165
Mtr8g0288 1729 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 159 IPR035897 -
Mtr8g0288 1729 ProSiteProfiles TIR domain profile. 11 182 IPR000157 GO:0007165
Mtr8g0288 1729 SUPERFAMILY "Winged helix" DNA-binding domain 408 515 IPR036390 -
Mtr8g0288 1729 PRINTS Disease resistance protein signature 216 231 - -
Mtr8g0288 1729 PRINTS Disease resistance protein signature 280 294 - -
Mtr8g0288 1729 PRINTS Disease resistance protein signature 373 387 - -
Mtr8g0288 1729 PRINTS Disease resistance protein signature 623 639 - -
Mtr8g0288 1729 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1283 1432 IPR027417 -
Mtr8g0288 1729 Coils Coil 248 268 - -
Mtr8g0288 1729 SUPERFAMILY L domain-like 1470 1710 - -
Mtr8g0288 1729 Gene3D - 184 333 IPR027417 -
Mtr8g0288 1729 Gene3D - 1282 1408 IPR027417 -
Mtr8g0288 1729 SUPERFAMILY L domain-like 545 810 - -
Mtr8g0288 1729 SMART till_3 12 156 IPR000157 GO:0007165
Mtr8g0288 1729 SMART till_3 1077 1222 IPR000157 GO:0007165
Mtr8g0288 1729 Gene3D - 338 422 IPR042197 -
Mtr8g0288 1729 Gene3D - 10 183 IPR035897 -
Mtr8g0288 1729 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 433 IPR027417 -
Mtr8g0288 1729 Pfam NB-ARC domain 1292 1386 IPR002182 GO:0043531
Mtr8g0288 1729 Pfam NB-ARC domain 198 405 IPR002182 GO:0043531
Mtr8g0288 1729 Gene3D Ribonuclease Inhibitor 509 820 IPR032675 -
Mtr8g0288 1729 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1388 1431 - -
Mtr8g0288 1729 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1080 1385 - -
Mtr8g0288 1729 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 986 - -
Mtr8g0288 1729 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1432 1710 - -
Mtr8g0288 1729 SUPERFAMILY Toll/Interleukin receptor TIR domain 1067 1225 IPR035897 -
Mtr8g0288 1729 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1388 1431 IPR044974 GO:0006952
Mtr8g0288 1729 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 986 IPR044974 GO:0006952
Mtr8g0288 1729 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1080 1385 IPR044974 GO:0006952
Mtr8g0288 1729 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1432 1710 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0288 Mtr-Chr8 3136868 3145400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0288 625 746 WRKY Transcription Factor Family AT4G12020 32.787 6.72e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0288 - - gmx:100779338 1428.31