Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0278 ATGGCTCATGAGATTGAAAAATTACAAACCAAATTTAATGACGTGGTGAAAGATATGCCTGGGTTGAATCTAAACTCAAATGTTGTGGTGGTTGAGCAAAGTGACATTGTAAGGAGGGAAACAAGTTCTTTTGTGTTAGAATCAGAGATCATTGGAAGAGAAGATGATAAAAAGAAGATCATAAGCTTGTTGAGGCAATCACATGAAAATCAGAATGTCTCCTTGGTTGCTATTGTTGGTATTGGTGGTTTGGGAAAGACAGCTCTTGCTCAATTGGTATACAATGATGCTCAAGTAACAAAGTCTTTTGAAAAGAGGATGTGGGTATGTGTCTCTGATAACTTTGATGTCAAAACTATTCTGAAGAAAATGTTGGAGTCATTAACCAATAAGAAAATTGATGATAAGTTATCATTGGAAAACTTACAAAGCATGCTACGTGACACCTTAACTGCTATGAGATACCTGTTAGTTCTAGATGATATTTGGAACGACAGTTTTGAAAAATGGGCTCAATTGAAGACTTATTTGATGTGTGGTGCTCAAGGTAGTAAGGTTGTAGTGACAACTCGTAGTAAAGTTGTAGCACAAACAATGGGTGTAAGTGTCCCCTATACTTTGAATGGTTTGACTCCAGAGAAATCTTGGAGTTTGTTGAAGAACATCGTTACATACGGGGATGAGACAAAAGGAGTTTTGAACCAAACTCTTGAAACTATTGGTAAGAAGATAGCTGTAAAGTGCAGTGGTGTTCCACTAGCAATCAGAACACTAGGAGGCCTTTTACAAGGTAAAAGTGATGAAACTGAATGGGTTGGTGTTTTACAAGATGACTTTTGGAAGTTATGTGAAGAAGAAGAAAGCATCATGCCAGTGTTGAAACTGAGTTACCATAACTTGTCACCCCAACTTAGACAATGTTTTGCATACTGTGCTATATATCCTAAGGATTGGAAAATACATAAGCATGAGTTAATTCATTTGTGGATGGCACAAGGTTATCTTGAATGTTCGGCTAAAAAAAAGCTGATGGAAGATATTGGTAACCAATTCGTAAATATTTTCTTGATGAAGTCATTTTTGCAAGATGTCGAAACTGATAGTTGTGGTGATATACACAGTTTCAAAATGCATGATTTAATACATGATCTTGCAATGGAAGTAGCCGGTAATGATTGTTGTTACCTGGATAGTGAGACAAAAAATCTTGTAGAAAGTCCCATGCATATAATGATGAAAATGGATGATATTGGTTTGTTAGAGTCGGTGGATGCAAGCAGGCTGCGTACTTTGATTTTGATGCCCAACCTTAAGACGTTTAGGAATGAGGAAGACATGTCTATTATTTCAAAATTCAAATATTTACGCGTCTTGAAGCTATCACATTGTTCTTTATGTAAGTTGTGTGATTCAATTGTAAAATTGAAGCATTTAAGATATCTTGACTTATGGTACTGCAGAGGAGTGGGAAGTGTTTTTAAATCCATAACTAATATGGTTTGCTTACAAACACTAAAACTGGTGGGGCAGAAGAATGTTCCAATTTCTATAAAAGATGTCTACAATTTAATCAATTTGAGACAACTTGATCTTGATATCGTAATGTCCTATGAGAAGAAGAACACAGTATGTAGATTTGGAAAATTGTGTGGGGTGGGGGGGCTTTACAAGAGGCTAGTTTTTTCTGATTGGCATTCTTCACTCACAAATCTTGTAGAGATTTCTATCAAAAAGTTTTATACTTTGAAGTATCTTCCACCAATGGAACGTCTCCCGTTTCTTAAACGACTTAATTTATTTTGTCTTGATGATTTGGAGTACATATATTTTGAAGAGCCTATTTTGCCTGAGTCATTCTTCCCATCTTTGAAGAAGCTCATTATCACGGACTGTTTCAAGCTGAGGGGATGGTGGAGGTTGAGGGATGATGTCAATAATGTTGAAAACTCTTCACAATTTCATCATCTTTCCTTCCCTCCCTTTTCTTCTCATCTTTCTCTATTAAGCATCTTCAGTTGTCCAATGTTGACTTGCATTCCTACTTTTCCAAACCTTGATAAGACACTGCATTTAGTAAGCACTAGTGTGGAGACATTAGAAGCAACATTAAACATGGTAGGTTCAGAACTTGCGATCGAATTCCCTCCTCTTTCCAAGCTAAAATACTTGCGCCTTGGCGGAGAAGACTTGGATCTGAAAATCCTTCCTTTTTTTAAGGAAGACCACAACTTTCTGTCTTCCATTCAAAATTTTGAATTTTGCAATTGTTCAGATCTAAAGGTATTGCCAGATTGGATTTGCAATCTCTCCTCACTTCAGCATATCAGCATTCAGAGATGTCGTAATTTGGCTTCGCTGCCCGAAGGAATGCCCCGTCTTTCCAAATTACATACCCTGGAAATCTTTGGATGTCCCCTCTTAGTTGAAGAATGTGTGACACAAACAAGTGCAACATGGTCCAAAATTTCTCACATCCCAAACATAATCTTAGACTAA 2496 0.369 MAHEIEKLQTKFNDVVKDMPGLNLNSNVVVVEQSDIVRRETSSFVLESEIIGREDDKKKIISLLRQSHENQNVSLVAIVGIGGLGKTALAQLVYNDAQVTKSFEKRMWVCVSDNFDVKTILKKMLESLTNKKIDDKLSLENLQSMLRDTLTAMRYLLVLDDIWNDSFEKWAQLKTYLMCGAQGSKVVVTTRSKVVAQTMGVSVPYTLNGLTPEKSWSLLKNIVTYGDETKGVLNQTLETIGKKIAVKCSGVPLAIRTLGGLLQGKSDETEWVGVLQDDFWKLCEEEESIMPVLKLSYHNLSPQLRQCFAYCAIYPKDWKIHKHELIHLWMAQGYLECSAKKKLMEDIGNQFVNIFLMKSFLQDVETDSCGDIHSFKMHDLIHDLAMEVAGNDCCYLDSETKNLVESPMHIMMKMDDIGLLESVDASRLRTLILMPNLKTFRNEEDMSIISKFKYLRVLKLSHCSLCKLCDSIVKLKHLRYLDLWYCRGVGSVFKSITNMVCLQTLKLVGQKNVPISIKDVYNLINLRQLDLDIVMSYEKKNTVCRFGKLCGVGGLYKRLVFSDWHSSLTNLVEISIKKFYTLKYLPPMERLPFLKRLNLFCLDDLEYIYFEEPILPESFFPSLKKLIITDCFKLRGWWRLRDDVNNVENSSQFHHLSFPPFSSHLSLLSIFSCPMLTCIPTFPNLDKTLHLVSTSVETLEATLNMVGSELAIEFPPLSKLKYLRLGGEDLDLKILPFFKEDHNFLSSIQNFEFCNCSDLKVLPDWICNLSSLQHISIQRCRNLASLPEGMPRLSKLHTLEIFGCPLLVEECVTQTSATWSKISHIPNIILD* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0278 831 Gene3D Ribonuclease Inhibitor 654 823 IPR032675 -
Mtr8g0278 831 Gene3D - 209 296 IPR042197 -
Mtr8g0278 831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 311 IPR027417 -
Mtr8g0278 831 Gene3D - 37 203 IPR027417 -
Mtr8g0278 831 PANTHER OS05G0414200 PROTEIN 4 539 - -
Mtr8g0278 831 SUPERFAMILY L domain-like 376 828 - -
Mtr8g0278 831 Gene3D Ribonuclease Inhibitor 402 653 IPR032675 -
Mtr8g0278 831 Gene3D - 297 388 IPR036388 -
Mtr8g0278 831 Pfam NB-ARC domain 53 299 IPR002182 GO:0043531
Mtr8g0278 831 PRINTS Disease resistance protein signature 75 90 - -
Mtr8g0278 831 PRINTS Disease resistance protein signature 149 163 - -
Mtr8g0278 831 PRINTS Disease resistance protein signature 248 262 - -
Mtr8g0278 831 PRINTS Disease resistance protein signature 473 489 - -
Mtr8g0278 831 PANTHER DISEASE RESISTANCE PROTEIN RP 4 539 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0278 Mtr-Chr8 3042865 3045360 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0278 72 353 WRKY Transcription Factor Family AT5G45050 24.430 5.08e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0278 - - mtr:MTR_8g027540 923.309