Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0275 ATGGCTGAACAAATTCCTTATGCTGTTGCTGCAAGCCTCGTTAACAGGTTGGCTTCAGCGGCCTTTCGTGAATTTGGACGGATTTATGGTGTGATGGATGAACTGGAAAGGCTTAAAAACACAGTTGAATCCATCAAAGCTGTGCTCCTTGATGCTGAAGACAAACAAGAGAAAAGTCATGCTGTACAAATCTGGATAAGAAGACTCAAAGATGATGTACTTCATCCTGCTGATGACTTGCTAGATGAATTTGCTATCGAAGACATGAGACAAAAACGGGATGAAGCTCGTAAGAACAAAGTAACACAGGTGCTTCATTCTTTATCTCCGAATAGAATTGCTTTTAGCCGTAAAATGGCTTATGAGGTTGAAAAGATACAAAAGAAGTTTAATGATGTGGTGAAAGATATGTCTGTGTTGAATCTAAACCCGAATGTTGTGGTGGTTCAGCAAACTAATAGTGTTAGGAGAGAAAAAAGTTCTTTTGTGTTAGAGTCAGATATCATTGGAAGAGATGATGATAAAAATGACATTGTAAGCATGTTGAGGCAATCACATGAAAATCAACGTGTCTCTGTGGTTGCTATTGTTGGGATTGGTGGTTTGGGAAAGACAGCTCTTTCTCAATTGGTATACAATGATGGTGAAGTAACAAATTATTTTGAAAAGTGTATGTGGGTTTGTGTCTCTGATAACTTTGATGTCAAAACTATTGTGAAGAACATGTTGGAGTCATTAACAAAGGAACCAATTAATGATACATTATCATTAGAAAACTTGCAAAACATGCTTCGAGAAAATCTAACTGGTAAAAAATACTTGTTAGTCCTAGATGACATTTGGAACGAGAGTTTTGGAAAATGGGCTCAATTGAGGACTTATTTGATGTATGGTGCTAAAGGCAGTAAGGTTGTAGTGACAACTCGTTCTAAAATTGTTGCAGAAAGAATGGGTGTAAGCGTCTCCTATAATTTGAATGGTTTGACTCTAGAAAAATCTTGGAGTTTGTTGACGAACATTATTACATATGGGGATGAGACGAAAGCAGTAAACCAAACTCTTGAAACAATTGGCAAGAAGATTGCAGAAAAGTGCAGTGGTGTTCCACTTGCAATCAGAACACTAGGAGGCCTATTGCAGGGCAAAAATGAAGAAAGAGAATGGATTGATGTTTTACAAGGTGACTTTTGGAAATTATGTGAAGACGAAGAAAGCATCATGCCGGTGTTGAAACTGAGTTACCAAAACTTGTCTCCTCAACTACGGCAATGTTTTGCCTACTGCTCTTTATATACTAAAGATTGGAAAATAGAGAAGGATGAGTTGATTCAACTATGGATGGCACAAGGTTATCTCGAATGTTCTGATGAAAAGCAGCGCATGGAAGACATCGGTAACCAATTTGTGACGATTTTATTGATGAAGTCTTTTTTCCAAGATGCTGAAATTTATCATGGAGATATACGTAGTTTCAAAATGCATGACCTTTCAATGAAAGTAGCCGGTAATGATTGTTGTTACTTGGACAGTGAGACAAAAAGACTGGTAGGAAGTCCCATGCATATAATGTTGAAAAGGGATGCTATTGGTTTCTTGGAGTCATTGAGTTCAAACAAGATGCGAACTTTGATTTTGTTGACTGATTTTTCAGAAAAGTTGAATGAAAAGGAATTATTAGTCATTTCAAAATTCAAATACTTACGCGTCTTGAAGCTTATGCGTTGTTCTCTAAGTAATTTGTGTGATTCAATTGAAAAGTTGAACCATTTGAGATATCTTAACTTACAAGAGTGTGAAGTAGTCGGAAGTCTTTCGACATCCATAAGCAATCTTGTTTGTTTACAAACACTATTATTGCACAGATGTAAAGTTGAATTTTCTACAATAGATATCTCAAAATTAATTAGTTTGAGATATTTTGATATAGAATATTTAAAACATCTGAACAGAAGAAGAGAACATCTAGATTTGGAAAATTGGGTCTGA 1986 0.3605 MAEQIPYAVAASLVNRLASAAFREFGRIYGVMDELERLKNTVESIKAVLLDAEDKQEKSHAVQIWIRRLKDDVLHPADDLLDEFAIEDMRQKRDEARKNKVTQVLHSLSPNRIAFSRKMAYEVEKIQKKFNDVVKDMSVLNLNPNVVVVQQTNSVRREKSSFVLESDIIGRDDDKNDIVSMLRQSHENQRVSVVAIVGIGGLGKTALSQLVYNDGEVTNYFEKCMWVCVSDNFDVKTIVKNMLESLTKEPINDTLSLENLQNMLRENLTGKKYLLVLDDIWNESFGKWAQLRTYLMYGAKGSKVVVTTRSKIVAERMGVSVSYNLNGLTLEKSWSLLTNIITYGDETKAVNQTLETIGKKIAEKCSGVPLAIRTLGGLLQGKNEEREWIDVLQGDFWKLCEDEESIMPVLKLSYQNLSPQLRQCFAYCSLYTKDWKIEKDELIQLWMAQGYLECSDEKQRMEDIGNQFVTILLMKSFFQDAEIYHGDIRSFKMHDLSMKVAGNDCCYLDSETKRLVGSPMHIMLKRDAIGFLESLSSNKMRTLILLTDFSEKLNEKELLVISKFKYLRVLKLMRCSLSNLCDSIEKLNHLRYLNLQECEVVGSLSTSISNLVCLQTLLLHRCKVEFSTIDISKLISLRYFDIEYLKHLNRRREHLDLENWV* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0275 661 Gene3D - 414 504 IPR036388 -
Mtr8g0275 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 428 IPR027417 -
Mtr8g0275 661 CDD RX-CC_like 7 129 IPR038005 -
Mtr8g0275 661 Gene3D - 10 123 - -
Mtr8g0275 661 Gene3D Ribonuclease Inhibitor 526 659 IPR032675 -
Mtr8g0275 661 Gene3D - 328 413 IPR042197 -
Mtr8g0275 661 Coils Coil 35 55 - -
Mtr8g0275 661 SUPERFAMILY L domain-like 537 645 - -
Mtr8g0275 661 PRINTS Disease resistance protein signature 193 208 - -
Mtr8g0275 661 PRINTS Disease resistance protein signature 267 281 - -
Mtr8g0275 661 PRINTS Disease resistance protein signature 365 379 - -
Mtr8g0275 661 PRINTS Disease resistance protein signature 585 601 - -
Mtr8g0275 661 PANTHER OS05G0414200 PROTEIN 34 654 - -
Mtr8g0275 661 PANTHER DISEASE RESISTANCE PROTEIN RP 34 654 IPR044974 GO:0006952
Mtr8g0275 661 Pfam NB-ARC domain 172 416 IPR002182 GO:0043531
Mtr8g0275 661 Gene3D - 150 322 IPR027417 -
Mtr8g0275 661 Pfam Rx N-terminal domain 11 98 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0275 Mtr-Chr8 3015472 3017816 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0275 191 452 WRKY Transcription Factor Family AT5G45050 25.000 5.02e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0275 - - mtr:MTR_8g027540 845.499