Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0266 AGACAAACATTGGTTTTGGTTGGTTCTGTGCTTTTTGGTAGCTCTGCTATTCTCAATGTTGTATTGATTGTAACAATCTGTGTCAGCACCTCCATTTTTCAGCACAAGAAAAAGCTTAGAAGAGTTATCAAAGGTGACACGTGTGTTGAAATTAAATCCAATTTGTGTTGCTTCACTTATGAAGAGCTTGAAGAAGCTACCAATGGATTTGACAAAGAGCTAGGAAGGGGAGCTTTTGGTATTGTTTACGAAGGAGTCATCAACAACGACACAGATTCCAAAACTCGGGTGGCAGTGCAAAAGTTAAACAGTTTTTTGTTGGATCAAGCCCATAGGGAATTCAGGAATGAGTTGAATTCCATTGGTCTCACTCATCACAAGAACTTGGTTCGTTTACTTGGATTTTGTGAGTGTAGAAGTGAAAGATTGCTTGTTTATGAGTACATGAGCAATGGCACTTTGGCAAGTTTTCTTTTCAATGCTGATGATGAGAAACAAAAACCAAGTTGGAAACTAAGGCTAGAACTTGCAATAGGTATAGCTAGAGGACTTGTGTATTTACATGAAGAGTGCATCACTAGGATCATCCATTGTGACATAAAGCCTCAGAACATACTCCTTGATGATTACTTCAATGCAAGAATTTCTGATTTTGGATTAGCAAAGCTGTTGAACATGAATCAAAGCAAAACCAACACTGGCATAAGAGGAACAAAAGGGTATGTTGCACTTGAATGGTTTAAAAACATGCCTATCACAGCTAAGGTTGATGTGTATAGTTATGGTGTAGTGCTACTTGAGATAATTTCATGTAGAAAATGTGTTGAAGAAATGGATGAAGAAGATGAAGACAAAGCTATCTTAACTGATTGGGCTTATGATTGCTACAAATATGGTGCTTTAGGTGCATTGGTTGAGGGTGACAATGAGGCATTGGAGGACAAGGAAAATTTGGAGAAATTGGTAAAGATTGCTATTTGGTGTGTTCAAGAGGATGCATGTCTTAGATCAACCATGAGAAATGTGATACATATGCTTGAAGGTACTGTTGAAGTGCAAGCTCCGTTAAACCCCTCACCGTTTAGTATTCAATATTCTCTAAATTAA 1107 0.3776 RQTLVLVGSVLFGSSAILNVVLIVTICVSTSIFQHKKKLRRVIKGDTCVEIKSNLCCFTYEELEEATNGFDKELGRGAFGIVYEGVINNDTDSKTRVAVQKLNSFLLDQAHREFRNELNSIGLTHHKNLVRLLGFCECRSERLLVYEYMSNGTLASFLFNADDEKQKPSWKLRLELAIGIARGLVYLHEECITRIIHCDIKPQNILLDDYFNARISDFGLAKLLNMNQSKTNTGIRGTKGYVALEWFKNMPITAKVDVYSYGVVLLEIISCRKCVEEMDEEDEDKAILTDWAYDCYKYGALGALVEGDNEALEDKENLEKLVKIAIWCVQEDACLRSTMRNVIHMLEGTVEVQAPLNPSPFSIQYSLN* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0266 368 Gene3D Phosphorylase Kinase; domain 1 29 148 - -
Mtr8g0266 368 Gene3D Transferase(Phosphotransferase) domain 1 149 355 - -
Mtr8g0266 368 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 363 - -
Mtr8g0266 368 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 2 363 - -
Mtr8g0266 368 SMART serkin_6 68 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0266 368 Pfam Protein tyrosine and serine/threonine kinase 70 345 IPR001245 GO:0004672|GO:0006468
Mtr8g0266 368 SUPERFAMILY Protein kinase-like (PK-like) 50 356 IPR011009 -
Mtr8g0266 368 ProSiteProfiles Protein kinase domain profile. 68 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0266 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0266 Mtr-Chr8 2944026 2945668 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0266 58 348 Receptor kinase-like Gene Family AT1G60800 40.678 3.96e-70 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr8g0266 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0266 - - mtr:MTR_8g011440 728.783