Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0263 ATGGCTTCCTCTCTACTCCTTTCCTTTCTCCTATACTCGCTGATTCTTCAATCCGTCGGTGTTGTAGCTCAAACCAATAGTACTATAGCCATTGGTGATTCTTTTACTGCTGAAACCAGCAACTCTACATGGTTACTTTCACCTTCTGGTGACTTTGCCTTTGGTTTTCTTCCAATACAAGACACTGACCTTTTTTTGCTTTCCATTTGGTATGCAAAAATTCCTGAAAAAACTGTTGTGTGGTATGCTAATAGAGAAATTCCTGCACCAAAAGGTTCAAAAGTGGAACTCAATGCCGATGATGGGTTGGTGCTAACTTCTCCAAATGGTGTCGGGTTATGGAATACTACTGAGGAACTTAGTGCTAAAGTTTCCCATGGTGTGTTCAACGATACTGGTAACTTTGTGCTCGAGGGTGGTGGTTGGGAGACTTTCAAGTATCCTAGTGACACCTTGTTGCCTTCTCAGTTTCTTCAAAAAGGTGGAAGCCTTTCTTCAAGGCTTAAGGAGTCAAATTTCAGTAAAGGAAGGTTTGAGCTTGTTTTACAAAATGATGGTAATCTTGTTATTCATTCTATTAATTTACCATCTGGTAGTGCTAATGAAAACTACTATGAAAGTGGAACTGTGGAATCCAATACTTCAAGTGCTGGAACTCAATTGGTCTTTGACAGATCAGGGTACTTGTATGTCTTGGGAGAGAACAATGAGAAATACAATGTGTCAGAGCAAGAGAGTAAAGTCTCTACCACTGAATTTTATGTTAGGGCAACTCTTAATTTTGATGGAGTGTTCACACTTTACAAGTATCCCAAGAATTCAACTGAGAGTGATGTTTGGACCATAGTGTGGTCTAAACCTGATAATATATGTAATTATATTGCTAATGAAGGGAGTGGTGTTTGTGGATATAATAGCTTCTGCACTTTGGGAGTTGATAAGAGACCAACATGTCAGTGTCCAAAACGATACTCACTGGTTGATCCTGATGATCCACTTGGTAGCTGCAAGCCAGACTTCATACAAGGATGTGCAGAAGATGAACTAAGTAAAAACAGAAATGATCTCTATGAGTTTGAGACTTTGACTGACATTGATTGGCCTATGTCAGATTCTGTGCTTCAAAAGCCTTTTACTGAAGATCAATGTATGAAAGCTTGTATGGAAGATTGCTTTTGTTCTGTGGCTATTTTCAGGTTAGGTGATAGTTGCTGGAAAAAGAAGTTACCACTCTCAAATGGGAAATATGATCCAACTCTTGATGGTGCTAAGGCCTTTTTGAAAGTTAGAATACATAATACCTCCATTGCTATCTTTCCTCCAAATTCAAATTCAACAATTGTGAACAAGATCAATAATAGAGAAACTTGGGTTTTGGTTGGTTCTGTGCTTTTGGGTAGCTCTACTATTCTCAATGTTGTATTCATTGTAGCAATATGTGTTTGTACCTCCTTCATTTTTCAGTACAAGAAGAAGCTTAGAAGAGTTAGCAAAAGTGACACTTCTGTTGAAACCAATTTGCGTTGCTTCACTTATGAAGAGCTTGAAGAAGCTACCAATGGATTTGACAAAGAGCTAGGAAGGGGAGCTTTTGGAATAGTTTACGAAGGAGTCATCAACAACAACACAACTTGCAAAACTCGCGTGGCAGTGAAGAAGTTGAACAGTTTTCTGTTGGATCAAGCTCATCGGGAATTCAGGAATGAGCTGAATGTCATTGGTCTCACTCATCACAAGAACTTGGTTCGTTTACTTGGATTTTGCGGGAGTGGAAGTGAAAGATTGCTTGTTTATGAGTACATGAGCAATAGCACTTTGGCAAGTTTTCTTTTCAATGAAGAAAAACAGAAGCCAAATTGGAAACTAAGGCTAGAACTTGCAATAGGAATAGCTAGAGGACTTGTGTATTTACATGAAGAGTGCATCACTAGGATTATCCATTGTGACATAAAGCCTCAAAACATACTCCTGGATGATTATTTCAATGCAAGAATTTCTGATTTTGGATTAGCCAAGTTGTTGAACATGAATCAAAGCAAAACCAACACTGGCATAAGAGGAACAAAAGGGTATGTTGCACTTGAATGGTTTAAAAACATGCCTATCACAGCTAAGGTGGATGTGTATAGTTATGGTGTAGTGCTACTTGAGATAATTTCATGTAGAAAATGTGTTGAAGAAATGGATGAAGAAGATGAAGACAAAGCAATTTTAACTGATTGGGCTTATGATTGCTACAAAGATGGTGCTTTATGTGCATTGGTTGAGGGTGACAATGAAGCATTGGAGGACAAGGAAAATTTGGAGAAATTGGTAATGATTGCTCTTTGGTGTGTTCAAGAGGATCCATATCTTAGACCAAACATGAGAGATGTGGTACATATGCTTGAAGGTACTGTTGAAGTGCAAGTTCCACCATACCCCTCACAAATTAGTATTCAATATTCTCTAAATTAA 2457 0.383 MASSLLLSFLLYSLILQSVGVVAQTNSTIAIGDSFTAETSNSTWLLSPSGDFAFGFLPIQDTDLFLLSIWYAKIPEKTVVWYANREIPAPKGSKVELNADDGLVLTSPNGVGLWNTTEELSAKVSHGVFNDTGNFVLEGGGWETFKYPSDTLLPSQFLQKGGSLSSRLKESNFSKGRFELVLQNDGNLVIHSINLPSGSANENYYESGTVESNTSSAGTQLVFDRSGYLYVLGENNEKYNVSEQESKVSTTEFYVRATLNFDGVFTLYKYPKNSTESDVWTIVWSKPDNICNYIANEGSGVCGYNSFCTLGVDKRPTCQCPKRYSLVDPDDPLGSCKPDFIQGCAEDELSKNRNDLYEFETLTDIDWPMSDSVLQKPFTEDQCMKACMEDCFCSVAIFRLGDSCWKKKLPLSNGKYDPTLDGAKAFLKVRIHNTSIAIFPPNSNSTIVNKINNRETWVLVGSVLLGSSTILNVVFIVAICVCTSFIFQYKKKLRRVSKSDTSVETNLRCFTYEELEEATNGFDKELGRGAFGIVYEGVINNNTTCKTRVAVKKLNSFLLDQAHREFRNELNVIGLTHHKNLVRLLGFCGSGSERLLVYEYMSNSTLASFLFNEEKQKPNWKLRLELAIGIARGLVYLHEECITRIIHCDIKPQNILLDDYFNARISDFGLAKLLNMNQSKTNTGIRGTKGYVALEWFKNMPITAKVDVYSYGVVLLEIISCRKCVEEMDEEDEDKAILTDWAYDCYKDGALCALVEGDNEALEDKENLEKLVMIALWCVQEDPYLRPNMRDVVHMLEGTVEVQVPPYPSQISIQYSLN* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0263 818 Gene3D - 21 146 IPR036426 -
Mtr8g0263 818 ProSiteProfiles Bulb-type lectin domain profile. 31 150 IPR001480 -
Mtr8g0263 818 SMART blect_4 36 148 IPR001480 -
Mtr8g0263 818 ProSitePatterns Protein kinases ATP-binding region signature. 526 553 IPR017441 GO:0005524
Mtr8g0263 818 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 813 - -
Mtr8g0263 818 SUPERFAMILY Protein kinase-like (PK-like) 501 809 IPR011009 -
Mtr8g0263 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 209 IPR036426 -
Mtr8g0263 818 PIRSF SRK 1 817 IPR024171 GO:0004674
Mtr8g0263 818 Pfam Protein tyrosine and serine/threonine kinase 522 796 IPR001245 GO:0004672|GO:0006468
Mtr8g0263 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Mtr8g0263 818 Pfam D-mannose binding lectin 78 158 IPR001480 -
Mtr8g0263 818 ProSiteProfiles Protein kinase domain profile. 520 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0263 818 Gene3D Transferase(Phosphotransferase) domain 1 601 804 - -
Mtr8g0263 818 Gene3D Phosphorylase Kinase; domain 1 483 600 - -
Mtr8g0263 818 Gene3D - 148 280 IPR036426 -
Mtr8g0263 818 SMART serkin_6 520 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0263 818 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 5 813 - -
Mtr8g0263 818 CDD PAN_AP_plant 351 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0263 Mtr-Chr8 2908671 2932277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0263 506 808 Receptor kinase-like Gene Family AT1G60800 40.625 6.66e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr8g0263 PK_Tyr_Ser-Thr 9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0263 - - mtr:MTR_8g011410 1594.33