Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0256 ATGTCTGTGTTGAATCTTAACTCCAATGTTGTGGTGGTTGAGAAAGCTAACAATGTAAGGAGGGAAACTTGTTCTTATGTGTTAGAATCAAATATCATTGGAAGAGAAGATGATAAAAACAAGATTATAAGCTTGTTGAGGCAATCACATGAAAATCAACAAGTTTCTGTGGTTGCTATTGTTGGTATTGGTGGTTTGGGAAAGACGGCTCTTGCTCAATTGGTATACAACGATGAAGAAGTGCAGAATTTGTTTGAAAAGAGAATGTGGGTATGTGTCTCTGATAACTTTGATGTCAAAACTATTCTGAAGAACATAATGGAGTCATTAACCAATAGGAAATTTGATGATACGTTATCATTGCAAAACTTGCAAAACATGCTTCGTGACAATTTAACTGGTAAAAAATACTTGTTAGTCCTAGATGACATTTGGAACAAGAGTAATGAAAAGTGGGATCAATTGACGACTTATTTGATGCGTGATGCTCAAGGCAGCAAGATTGTAGTGACAACTCGTAGTGAATCAGTGGCACAAACAATGGGTGTAAGTAGCCCCTATGTTTTGAATGGCTTGACTCCCCAAGAATCGTGGCGATTGTTAAAGACTGTCATTACATATGGGAATGAGAAACAAGGAGTGAGCCGAACTCTTGAGTCAATTGGTGAGAAGATAGCAGAAAAGTGCAAAGGAGTTCCATTAGCAATAAGATCATTGGGAGGCATATTACAAAGCAAAAGGGAAGAAAGGGAGTGGATTGAAGTCTTACAAGGTGACTTTTGGAAATTGTGCGAGGATAAAGATAGCATCTTGCCAGTCCTAAGATTGAGTTACTATAACTTGTCACCTCAACAAAGGCAATGTTTTGCTTATTGCTCTTTATTTCCCCAGGATTGGAAATTTATGAAGGATGAATTAATTCAAATGTGGATGGCACAAGGTTATCTTGACGGTTCAGTTGAAAAGCAATGCATGAAAGATGTTGGTAATCAATTTGTAAATATTTTCTTGAAGAATTCATTCTTCCAAGATGCAACAATGAATTACCATGGTGATATAGATGGTTTTAAAATGCACGATTTAATGCACGATCTTGCAACACAAGTAGCTGGCAATGATTGTTGTTACTTGGATAGTAAGGCAAAAAGATGTCTAGGAAGACCTGTGCATGTATCATTGAAATGGGATGCCTTTTGTATGTTGGAATCATTGGATTCAAGTAGGCTGCGTACTTTGATTATGTTGGATTCCAATTCGGAAAAAGTGGATGAAGAGGAATTATCAGTTATTTCAAATTTCAAATACTTACGTGTCTTGAGGCTTGTGACTTCTCGTCATCATAGCAAGCTAGTTGGTTCCATTCAAAAATTGAAGCATTTAAGGCATCTTAACTTGTCAAAGCGTGATGGACTAAAAAGTCATCCCAAATTTATCAGCAATCTTGTTTGTTTACAGACAATAAATTTGTTAATGAATGATGATGATGTACTTTATACAGAAATTCTTTCAAAATTAATCAATTTGAGACACCTTGAGATATATCATTTGACCTTCAAAGACGAGACACTCTCTGGATCTAGAAAATCGAGCATACAACAACACAAGGGTTTGACTTTGTCCAATTGGCTTTCTCCACTCACAAATATAATTGAAATATCTCTTAATTATTGCCAAGGTTTCCAACATCTCCCACCATTGGAACGCCTTCCGTTCCTTAAGTCACTCGAGTTACGTCACCTTTATGAATTGGAGTACATATATTATGAAGAGCCTATTCTTCATGAATCATTCTTCCCATCTTTGGAGAGGCTTGAACTTTTAGTTTGTGGGAAGCTGATGGGATGGAGGAGGATAGAAGATGATTTGAGTGATATCAACTCTTCACATCATCGCTTGTTGCCTCAGTTTCAGTTTCCTTGTCTCTCTAAATTGGATATTAATGGGTGTGACATGTTGGCTTTCATGCCTACTTTTCCAACCATTAAGAAGAGATTAAAATTGAGGAGTTGCAGTGCAGAGATATTGGAAGCAACACTAAATATAGCAGAGTCACCATATTCGAGTGGCTTCCCTCCTCTTTCGATGCTCAAATTCTTGATAATTACTGATACCATTATGGGTATGGAAAAAGCCCCAAAGGATTGGTTTAAAAATCTTATTTCTCTTGAGAATCTTGAATTTTACTTTCTTTCAAGTCAAAAATTTCAAGTAATTGAAATGTGGTGGTTTAAAGATGACCTCAACTGTCTTCCTTCCCTCAAAAAAATCACTTTTTTTCATTGTGACCTAAATGCATTGCCATATTGGATATGCAACATCTCATCACTTCAACACATTGAGGTGTGCGGTTGTAGAGATTTGGAAGATCTGCCTGAGGCAATGCCACGTCTTACAAACTTACATACCTTAGAAATCATTGAATGTCCATTCTTAGCTCAACAATGTGAGACAGAAACAAGTGCAACTTGGTCTAAAATTGCTCACATCCCAAACATAATCTTAAAAGAAAGTCTTTGGGATTAG 2523 0.3666 MSVLNLNSNVVVVEKANNVRRETCSYVLESNIIGREDDKNKIISLLRQSHENQQVSVVAIVGIGGLGKTALAQLVYNDEEVQNLFEKRMWVCVSDNFDVKTILKNIMESLTNRKFDDTLSLQNLQNMLRDNLTGKKYLLVLDDIWNKSNEKWDQLTTYLMRDAQGSKIVVTTRSESVAQTMGVSSPYVLNGLTPQESWRLLKTVITYGNEKQGVSRTLESIGEKIAEKCKGVPLAIRSLGGILQSKREEREWIEVLQGDFWKLCEDKDSILPVLRLSYYNLSPQQRQCFAYCSLFPQDWKFMKDELIQMWMAQGYLDGSVEKQCMKDVGNQFVNIFLKNSFFQDATMNYHGDIDGFKMHDLMHDLATQVAGNDCCYLDSKAKRCLGRPVHVSLKWDAFCMLESLDSSRLRTLIMLDSNSEKVDEEELSVISNFKYLRVLRLVTSRHHSKLVGSIQKLKHLRHLNLSKRDGLKSHPKFISNLVCLQTINLLMNDDDVLYTEILSKLINLRHLEIYHLTFKDETLSGSRKSSIQQHKGLTLSNWLSPLTNIIEISLNYCQGFQHLPPLERLPFLKSLELRHLYELEYIYYEEPILHESFFPSLERLELLVCGKLMGWRRIEDDLSDINSSHHRLLPQFQFPCLSKLDINGCDMLAFMPTFPTIKKRLKLRSCSAEILEATLNIAESPYSSGFPPLSMLKFLIITDTIMGMEKAPKDWFKNLISLENLEFYFLSSQKFQVIEMWWFKDDLNCLPSLKKITFFHCDLNALPYWICNISSLQHIEVCGCRDLEDLPEAMPRLTNLHTLEIIECPFLAQQCETETSATWSKIAHIPNIILKESLWD* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0256 840 Gene3D - 278 369 IPR036388 -
Mtr8g0256 840 Pfam NB-ARC domain 35 257 IPR002182 GO:0043531
Mtr8g0256 840 PANTHER DISEASE RESISTANCE PROTEIN RP 547 660 IPR044974 GO:0006952
Mtr8g0256 840 PANTHER DISEASE RESISTANCE PROTEIN RP 21 538 IPR044974 GO:0006952
Mtr8g0256 840 Gene3D - 17 185 IPR027417 -
Mtr8g0256 840 Gene3D - 191 277 IPR042197 -
Mtr8g0256 840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 292 IPR027417 -
Mtr8g0256 840 SUPERFAMILY L domain-like 343 827 - -
Mtr8g0256 840 Gene3D Ribonuclease Inhibitor 396 666 IPR032675 -
Mtr8g0256 840 Gene3D Ribonuclease Inhibitor 667 826 IPR032675 -
Mtr8g0256 840 PANTHER OS05G0414200 PROTEIN 547 660 - -
Mtr8g0256 840 PANTHER OS05G0414200 PROTEIN 21 538 - -
Mtr8g0256 840 PRINTS Disease resistance protein signature 57 72 - -
Mtr8g0256 840 PRINTS Disease resistance protein signature 131 145 - -
Mtr8g0256 840 PRINTS Disease resistance protein signature 229 243 - -
Mtr8g0256 840 PRINTS Disease resistance protein signature 455 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0256 Mtr-Chr8 2853439 2859383 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0256 55 334 WRKY Transcription Factor Family AT5G45050 22.830 8.87e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0256 - - mtr:MTR_8g011280 1674.45