Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr8g0247 | ATGCCACTCAGCAATTTCAAGAAGAAAGTTGAATACACTAATCCAATTCGCAAATACAATGAGATGATTGGAAGTACTTCTTCCGGTATTTCTTTTCTTGTGTTGACGGAGCCGGAGGATATTTGTAAGGATGGAGGTTTGGTAAAAAAGATACTCAAGCCCGGGGATGACAAATATCAACATGTTGATGATTATGTTTTAGTTAAGTATGAAGCACGTCTTGATGATGGAACTCTTGTTAAAAAATCTGATGATTATGGAGTGGAGTTCACACTCAACGATGGTCATTTTTGTCCTGCATTGTCAATCGCTATTAAGACCATGAAGATCGGAGAAAAAGTCATTTTAACTGTTAAGCCACAATATGGATTTGGTGACAAGGGCAAGCCAGCTCACCATGATGAAGGTTCAGTTCCACCTAACGCAACATTGCAGATTATTCTCGAGTTTGTTTCTTGGAAGGAATGACCTTTTCGTAAGATGGTCCTCAAGGAAGGAGAAGGAGACGACTGTCCAAATGAGGGAGCTCTTGTGAAATTGAAACTAATTGGTAAGCTGCAAGATGGCACTGTATTTTTTAAGAAGGGATATAGTGATGGTGATGAAGTGGAGCTGTTTGAATTTAAAACAGACGAGGAGCAAGTGATTGATGGGCTTGATAGAGCTGTACTGACCATGAAGAAGGATGAGGTAGCTTTGTTGACTATTGCGCCTGAATATGCTTTTGGTTCATCAGAGTCTCAGCAGGAATTGGCAGTGGTTCCTCCTAATTCAACCGTGTATTATGAGGTTGAGCTAGTATCATTCGTAAAGGCTAAGGAGGTATCGGACATGAACACCGAAGAGAAGATAGAAGCTGCTCTTGAGAAGCGACAAGAAGGTGTAGCATTAGTTTATGCTGCTGAATATGCAAGAGCTTCTAAAAGATTTCAGAAGGTAACCAGGTTACATTAA | 954 | 0.4036 | MPLSNFKKKVEYTNPIRKYNEMIGSTSSGISFLVLTEPEDICKDGGLVKKILKPGDDKYQHVDDYVLVKYEARLDDGTLVKKSDDYGVEFTLNDGHFCPALSIAIKTMKIGEKVILTVKPQYGFGDKGKPAHHDEGSVPPNATLQIILEFVSWKE*PFRKMVLKEGEGDDCPNEGALVKLKLIGKLQDGTVFFKKGYSDGDEVELFEFKTDEEQVIDGLDRAVLTMKKDEVALLTIAPEYAFGSSESQQELAVVPPNSTVYYEVELVSFVKAKEVSDMNTEEKIEAALEKRQEGVALVYAAEYARASKRFQKVTRLH* | 318 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr8g0247 | 316 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 174 | 269 | IPR001179 | GO:0003755 | |
| Mtr8g0247 | 316 | SUPERFAMILY | FKBP-like | 34 | 155 | - | - | |
| Mtr8g0247 | 316 | Gene3D | - | 156 | 271 | IPR046357 | GO:0003755 | |
| Mtr8g0247 | 316 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 269 | 313 | - | - | |
| Mtr8g0247 | 316 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 7 | 154 | - | - | |
| Mtr8g0247 | 316 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 269 | 313 | - | - | |
| Mtr8g0247 | 316 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 157 | 270 | - | - | |
| Mtr8g0247 | 316 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 7 | 154 | - | - | |
| Mtr8g0247 | 316 | SUPERFAMILY | FKBP-like | 157 | 288 | - | - | |
| Mtr8g0247 | 316 | Gene3D | - | 34 | 155 | IPR046357 | GO:0003755 | |
| Mtr8g0247 | 316 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 157 | 270 | - | - | |
| Mtr8g0247 | 316 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 63 | 147 | IPR001179 | GO:0003755 | |
| Mtr8g0247 | 316 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 171 | 266 | IPR001179 | GO:0003755 | |
| Mtr8g0247 | 316 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 63 | 154 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr8g0247 | Mtr-Chr8 | 2750647 | 2752889 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr8g0247 | 30 | 315 | Calmodulin-binding Proteins | AT3G25230 | 63.514 | 6.81e-119 | 352 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr8g0247 | K09571 | - | gmx:100803189 | 385.956 |