Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0245 ATGATTAAGAAGCAGTTCCGAAAGTTTGCTCTTCAACTTCATCCCGATAAAAAGAAGTTTGCTGGTACAGAAGCTGCATTTAAGCTGATTGGAGAAGCTCAAAGACTGCTTTCAGACAGAGAAAAACGAACTAGGTATGACATGAAGCTTAATGTGAACAAAACTGCTATGCCGCCGCGTTCTAATCAACCGAAGGTTCCTACAAATTTCAATTCTGCAATGAAAAACAATGTCAGGCCCAGTTTTACAAACTCGAATACCCAGCAGCAGCAGAACGGTGTGCACCGTACTTTCTGGACTGCCTGCCCATTTTGTTCCGTGAAGTATGAGTACTACAGAGAAATTTTGAATAAATCTCTTCGCTGTCAACAATGCCATGGGCTCTTCGTTGCATGTATTCTGGATATGCATGGTACATCACCAACAACTAACCCAAGTCAGCAAGCTTCCAAGGTGAATGTTGGATCTCAAGGTAACTCGCACGCTGAGAAGTCCAATACAAAGCCTTTCAAGAAAAAAGTCCCTGTTGGTGTCTCTAGAAAGTCAGATGTGAAGAGAAAGAGGAATCAAGTGGAAGAATTTAGTCAAAGCTCTGATTCTACAAGCAGCAGTGATTCTGAAGATGAAATAGTTGCTGGTAAGAATGGTTTTCTAGGTGTAGGAGACCATTCAACTGAGCAGCCACGTAGATCTGTGCGACAGAAGCATAATGTTTCCTACAGTGTTAACATGAATGGCACTGACAATGACTTATTACAACCTTCAAAAACAGGTCAGGAGAATGGATCACATTATGGTGATTGTCAAAGTCACGGGGAGACTGCTAAAACAAATGATTAG 840 0.4167 MIKKQFRKFALQLHPDKKKFAGTEAAFKLIGEAQRLLSDREKRTRYDMKLNVNKTAMPPRSNQPKVPTNFNSAMKNNVRPSFTNSNTQQQQNGVHRTFWTACPFCSVKYEYYREILNKSLRCQQCHGLFVACILDMHGTSPTTNPSQQASKVNVGSQGNSHAEKSNTKPFKKKVPVGVSRKSDVKRKRNQVEEFSQSSDSTSSSDSEDEIVAGKNGFLGVGDHSTEQPRRSVRQKHNVSYSVNMNGTDNDLLQPSKTGQENGSHYGDCQSHGETAKTND* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0245 279 MobiDBLite consensus disorder prediction 234 279 - -
Mtr8g0245 279 CDD DnaJ 2 39 IPR001623 -
Mtr8g0245 279 SUPERFAMILY Chaperone J-domain 2 53 IPR036869 -
Mtr8g0245 279 ProSiteProfiles dnaJ domain profile. 1 50 IPR001623 -
Mtr8g0245 279 Gene3D DnaJ domain 1 98 IPR036869 -
Mtr8g0245 279 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 279 - -
Mtr8g0245 279 MobiDBLite consensus disorder prediction 141 164 - -
Mtr8g0245 279 MobiDBLite consensus disorder prediction 165 193 - -
Mtr8g0245 279 MobiDBLite consensus disorder prediction 194 209 - -
Mtr8g0245 279 PANTHER - 1 279 - -
Mtr8g0245 279 Pfam DnaJ domain 2 47 IPR001623 -
Mtr8g0245 279 MobiDBLite consensus disorder prediction 141 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0245 Mtr-Chr8 2742428 2743746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0245 1 131 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.588 5.20e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0245 - - mtr:MTR_8g011080 503.442