Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr8g0241 | TGTCCTGCATTGTCAATCGCTGTTAGGATCATGAAGATCGGAGAAAAAGTCATTTTAACTGTTAAGCCACAATATGGATTTGGTGACAAGGGCAGGCCAGCTCACCATGATGAAGCTTCAGTTCCACCTAACGCAACATTGCAGATCACTCTCGGGTTAGTTTCTTGGAACAAAGCAACTTTTCATAAGCAGCTCCTCAAGGAAGGAGAAGGAGCTGACCGTCCAAATGAGGGAGCTCTTGTGAAATTAAAACTAATTGGTAAGCTGCAAGATGGCACTGTACTTTTGAACAAGGGCTATAGTGATGGTGATGATGATGAACTGGATCTGTTTGAATTTAAAACAGACGAGGAGCAAGTGATTGATGTGCTTAATATAGCTGTAATGACCATGAAGAAGGGTGAGGTAGCTTTGTTGACTATTGCGCCACAATATGTTTTTGGTTCATCAGAGTCTCGGCTGGAATTGGCAGTGGTTCCTCCGAATTCAACCTTGTATTATCAGGTTGAGCTAGTATCATTTGTAAAGGCTAAGGAGGTATCGGACATGAACACTGAAGAGAAGATAGAAGCTGCTCTTGAGAAGCGACAAGAAGGCCTAGCATTAGTTTATGCTGCTGAATATGCAAGAGCTTCTAAGAGATTTCAGAAGGCTCTGAACTTTATAAAGTATGATACTTCCTTTCCCGATGAGGATAGGGAAATTGTTGGCTTGAGGCATTCTTGTAATCTGGGCAATGCATGCTGCTTGATGAAATTGAAAGATTATGAACGGGCAAATAAATATTTTAAGGCATGGCTGCTGTCTCCCATCTTATAG | 819 | 0.4176 | CPALSIAVRIMKIGEKVILTVKPQYGFGDKGRPAHHDEASVPPNATLQITLGLVSWNKATFHKQLLKEGEGADRPNEGALVKLKLIGKLQDGTVLLNKGYSDGDDDELDLFEFKTDEEQVIDVLNIAVMTMKKGEVALLTIAPQYVFGSSESRLELAVVPPNSTLYYQVELVSFVKAKEVSDMNTEEKIEAALEKRQEGLALVYAAEYARASKRFQKALNFIKYDTSFPDEDREIVGLRHSCNLGNACCLMKLKDYERANKYFKAWLLSPIL* | 273 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr8g0241 | 272 | Gene3D | - | 60 | 176 | IPR046357 | GO:0003755 | |
| Mtr8g0241 | 272 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 57 | IPR001179 | GO:0003755 | |
| Mtr8g0241 | 272 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 60 | 181 | - | - | |
| Mtr8g0241 | 272 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 58 | - | - | |
| Mtr8g0241 | 272 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 175 | 261 | - | - | |
| Mtr8g0241 | 272 | Gene3D | - | 1 | 59 | IPR046357 | GO:0003755 | |
| Mtr8g0241 | 272 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 58 | - | - | |
| Mtr8g0241 | 272 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 60 | 181 | - | - | |
| Mtr8g0241 | 272 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 175 | 261 | - | - | |
| Mtr8g0241 | 272 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 2 | 49 | IPR001179 | GO:0003755 | |
| Mtr8g0241 | 272 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 74 | 172 | IPR001179 | GO:0003755 | |
| Mtr8g0241 | 272 | SUPERFAMILY | FKBP-like | 1 | 59 | - | - | |
| Mtr8g0241 | 272 | Gene3D | Tetratricopeptide repeat domain | 177 | 269 | IPR011990 | GO:0005515 | |
| Mtr8g0241 | 272 | SUPERFAMILY | TPR-like | 180 | 267 | IPR011990 | GO:0005515 | |
| Mtr8g0241 | 272 | SUPERFAMILY | FKBP-like | 61 | 194 | - | - | |
| Mtr8g0241 | 272 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 78 | 175 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr8g0241 | Mtr-Chr8 | 2718463 | 2722267 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr8g0241 | 1 | 261 | Calmodulin-binding Proteins | AT3G25230 | 58.736 | 1.15e-104 | 313 |