Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0237 ATGTATGGCGTCGGCGCTAACAATGAATTTGATGCTAGATATATCATTCCACTCAACAGATTCAGTAAGAATGTTGAATACACTAATCCAATTCGCAAATACAATGAGATGATCGGAAGGACTTCTTATGATATTTCTTTTCTTGTGTTGACGGAGCCGGAGGATATTTGTAAGGATGGAGGTTTGGTGAAGAAGACACTCAAGCCCGGGGATGACAAATGTCAACATTTTGATGATTATGATTATGTTTTAGTTAAGTACGAAGCACGTCTTGATGATGGAACTCTTGTTAAAAAATCTGATGATTATGGAGTGGAGTTCACACTCAACGATGGTCAGTTAGTCCTACAACTTTTATTATACATTCCTTTTCCGGTTCGATCTTACTTTCTTTTACGCCATCTCATAGGTCATTTTTGTCCTGCATTATCAATCGCTGTTAAGACTATGAAGATCGGAGAAAAAGTCATTTTAACTGTTAAGCCACAATATGGATTTGGTGACAAGGGCAAGCCAGCTCACCATGATGAAGGTTCAGTTCCACCTAACGCAACATTGCAGATTATTCTCGAGTTTGTTTCTTGGAAGGAAGGACCTAAGGAAGGACCTTTTCGTAAGATGGTCCTCAAGGAAGGAGAAGGGGACGACTGTCCAAATGAGGGAGCTCTTGTGAAATTGAAACTAATTGGTAAGCTGCAAGATGGCACTGTATTTTTTAAGAAGGGCTATAGTGATGGTGATGAAGTGGAGCTGTTTGAATTTAAAACAGATGAGGAGCAAGTGATTGATGGGCTTGATAAAGCTGTACTGACCATGAAGAAGGGTGAGGTAGCTTTGTTGACTATTACACCTGAATATGCTTTTGGTTCATCAGAGTCTCAGCAGGAATTGGCAGTGGTTCCTCCTAATTCAACCGTGTATTATGAGGTTGAGCTAGTATCGTTCGTAAAGGCTAAGGAGGTATCAGACATGAACACTGAAGAGAAGATAGAAGCTGCTCTTAAGAAGCGACAAGAAGCCGAAGCATTCGTTTATGCTGCTGAATATGCAAGAGCTTCTAAAAGATATCAGAAGGCTCTGAAGTTTATAAAGTATGATACTTCCTTTCCCGATGAGGATAGGGAAATTGTTGGCTTGAGGCATTCTTGTAATCTGGGCAATGCATGCTGCTTGATGAAATTGAAAGATTATGAACGGGCAAATAAATATTTTAAGGATCGCTTGCATGATTTCAACTTAAAGCGCATAGACACTGAAACGTTGTCTGCGAACCATAGACTTCGATGCAGGCGGAAAGACGCCAATAATTATTATTTGAATGTGATGTGA 1329 0.3995 MYGVGANNEFDARYIIPLNRFSKNVEYTNPIRKYNEMIGRTSYDISFLVLTEPEDICKDGGLVKKTLKPGDDKCQHFDDYDYVLVKYEARLDDGTLVKKSDDYGVEFTLNDGQLVLQLLLYIPFPVRSYFLLRHLIGHFCPALSIAVKTMKIGEKVILTVKPQYGFGDKGKPAHHDEGSVPPNATLQIILEFVSWKEGPKEGPFRKMVLKEGEGDDCPNEGALVKLKLIGKLQDGTVFFKKGYSDGDEVELFEFKTDEEQVIDGLDKAVLTMKKGEVALLTITPEYAFGSSESQQELAVVPPNSTVYYEVELVSFVKAKEVSDMNTEEKIEAALKKRQEAEAFVYAAEYARASKRYQKALKFIKYDTSFPDEDREIVGLRHSCNLGNACCLMKLKDYERANKYFKDRLHDFNLKRIDTETLSANHRLRCRRKDANNYYLNVM* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0237 442 SUPERFAMILY FKBP-like 54 195 - -
Mtr8g0237 442 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 221 316 IPR001179 GO:0003755
Mtr8g0237 442 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 218 313 IPR001179 GO:0003755
Mtr8g0237 442 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 79 189 IPR001179 GO:0003755
Mtr8g0237 442 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 80 196 IPR001179 GO:0003755
Mtr8g0237 442 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 13 197 - -
Mtr8g0237 442 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 204 319 - -
Mtr8g0237 442 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 316 419 - -
Mtr8g0237 442 PANTHER PEPTIDYLPROLYL ISOMERASE 316 419 - -
Mtr8g0237 442 PANTHER PEPTIDYLPROLYL ISOMERASE 13 197 - -
Mtr8g0237 442 PANTHER PEPTIDYLPROLYL ISOMERASE 204 319 - -
Mtr8g0237 442 SUPERFAMILY FKBP-like 204 335 - -
Mtr8g0237 442 SUPERFAMILY TPR-like 324 406 IPR011990 GO:0005515
Mtr8g0237 442 Gene3D Tetratricopeptide repeat domain 321 413 IPR011990 GO:0005515
Mtr8g0237 442 Gene3D - 50 197 IPR046357 GO:0003755
Mtr8g0237 442 Gene3D - 198 320 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0237 Mtr-Chr8 2669283 2673864 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0237 42 402 Calmodulin-binding Proteins AT3G25230 58.904 8.49e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0237 K09571 - gmx:100803189 414.075