Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0227 ATGGCTGAACAAATTCCATACGGTGTTGCTACAAGTCTCTTTAACAGGTTGGCTTCTGCGGCCTTTCGTGAACTTGGACGGATTTATGGTGTTATGGATGAATTGGAAATACTCAAGAACACAGTTGAATCCATCAAAGCTGTCCTCCTTGATGCTGAAGACAAACAAGAGCAAAGTCATGCTGTACAAAACTGGGTTAGAAGGCTCAAAGATGTGCTTCTTCCTGCTGATGATTTGATAGATGAGTTTCTTATTGAAGATATGATACATAAAAGGGATAAAGCTCATAACAACAAAGTGACTCAGGTATTTCATTCCTTATCCATAAGCAGAGCTGCTTTTCGCCGTAAAATGGCTCATGAGATTGAAAAAATACAAAAAAGTGTTAATGATGTTGTGAAAGATATGTCTGTGTTGAATCTTAACTCCAATGTTGTGGTGGTTAAGAAAACTAATGATGTAAGGAGGGAAAGTAGTTCTTTTGTGTTAGAATCAGAGATTATTGGAAGAGAAGATGATAAAAAGAAGATTATAAGCTTGTTGAGGCAATCACATGAAAATCAGAATGTCTCCTTGGTTGCTATTGTTGGTATTGGTGGTTTGGGAAAGACAGCTCTTGCTCAATTGGTATACAATGATGATCAAGTGCAAAATTTGTTTGAAAAGAGTATGTGGGTATGTGTCTCGGATAACTTTGATGTCAAAACTATTCTGAAGAACATGGTTGCGTTGTTAACCAAAGACAATATTGCAGATAAGAATTTAGAAGAGTTGCAGAATATGCTTCGAGCCAATTTGACTGGTACGAGATACTTGTTAGTCTTGGATGACATTTGGAACGAGAGTTATGAAAAGTGGGATGAATTGAGGACTTATTTGATGTGTGGTGCTCAAGGCAGTAAGGTTGTAGTGACAACTCGTAGTAAAATTGTGGCACAAACAATGGGTGTAAGTGACCCCTATGTTTTGAGTGGTTTAACTCCAGAAGAATCTTGGGGTTTGTTAAAGAATATTACCTTTCCGGATGATGCCATTGGAGTGAACCAAACTCTTGAACCAATTGGAAAGAAGATAGCAGAAAAGTGCAAAGGAGTTCCATTAGCAATTAGATCACTGGGAGGCATATTACGAAGTAAAAGGGAAGAAAGGGAGTGGATCGATGTCTTACAAGGTGACTTTTGGAAATTGTGCGAGGATAAAGATAGCATCATGCCGGTCCTAAAATTGAGTTACAATAACTTGTCGCCTCAACAAAGACAATGTTTTGCTTATTGCTCTATATTTCCTCAAGATTGGAAATTGAAGAAGGATGAGTTAATTCAAATGTGGATAGCACAAGGATATCTTGGATGTTCAGTTGAAGAGCAATGCATGGAAGATGTTGGTAATCAATTTGTAAATATTTTCTTGATGAATTCATTCTTCCAAGATGCAGAATTGAATGACGATGGTGATGTATCTGGTTTTAAAATGCATGATTTAATGCACGATCTTGCAACACAAGTAGCTGGCAATGATTGTTGTTACTTGGATAGTAGGGCAAAAAGATGTCTAGGAAGACCTGTGCATATATTAGTGGAATCTGATGCCTTTTGTATGTTGGAATCGTTGGATTCAAGTAGGCTGCGAACTTTGATTGTGTTGGAATCCAATCGGAATGAATTGGATGAAGAGGAATTTTCAGTCATTTCCAATTTCAAATACTTACGCGTCTTGAAGCTGAGGTTGCTGGGTAGTCATAAAATGCTAGTTGGTTCCATTGAAAAATTGAAGCATTTAAGGCATCTTGACTTGACACATTGTGATGGACTAAAAATTCATCCCAAATCTACGAGCAATCTTGTTTGTTTACAAACAATAAAATTGTTAATGTGTGTTGGACTTTCTCGAAAAGTTCTTTCAAAATTAATCAATTTGAGACACCTTGTGATAAAAGGATCTATGACCTTCAAAGATGAGACACCGTCTAGATTTAAAAAATTGAGCATACAACAATATAAGGGTCTGACTTTGTCCAATTGGACTTCTCCACTCACAAATATAAATGAAATATATCTTGATGGTTGCTTAAATTTACGATATCTCTCACCCTTGGAACACCTTCCATTCCTTAAGTCACTAGAGTTACGTTATCTTCTTCAATTGGAGTACATATATTACGAAGATCCTATTCTTCATGAATCATTCTTCCCATCTTTGGAGATCCTACAACTTATTGCTTGTTCCAAGCTAAAGGGATGGAGGAGGATGAGAGATGATTTGAATGATATTAACTCTTCACATCATCTCTTGTTGCCTCACTTTCCTTCTCTTTCTAAATTGACAATTTGGTCTTGCGAGAGGTTGACTTTCATGCCTACTTTTCCAAACATTAAGAAGAGATTAGAATTGGGACTTGTCAATGCGGAGATAATGGAAGCAACACTAAATATAGCAGAGTCACAATATTCGATTGGCTTCCCTCCTCTTTCCATGCTCAAATCCTTGAAAATTAATGCTACCATTATGGGTATCGAAAAAGCTCCGAAGGATTGGTTTAAAAATCTTACTTCTCTTGAGAATCTTCACTTTTACTTTCTTATGAGTAAAAACTTACAAGTAATTGAAATGTGGTTTAAAGATAACCTCAATTGTCTTCCTTCTCTCCGAACAATCAACTTTGAGGGTATTGTTGGTGACGTTGTAAAGGCATTACCAGATTGGATATGCAACATCTCATCACTTCAGCATCTTAAGGTGAAGGAATGCAGAGATTTGGTAGATCTGCCTGACGGAATGCCACGCCTTACAAAATTACATACCTTAGAAATCATTGGATGTCCACTCTTAATTGACGAATGTCAGAGAGAAGCAAGTGTAACTTGCTCTAAAATTGCTCACATCCCAAACATCATCACAAGGGGTGATTAG 2910 0.3704 MAEQIPYGVATSLFNRLASAAFRELGRIYGVMDELEILKNTVESIKAVLLDAEDKQEQSHAVQNWVRRLKDVLLPADDLIDEFLIEDMIHKRDKAHNNKVTQVFHSLSISRAAFRRKMAHEIEKIQKSVNDVVKDMSVLNLNSNVVVVKKTNDVRRESSSFVLESEIIGREDDKKKIISLLRQSHENQNVSLVAIVGIGGLGKTALAQLVYNDDQVQNLFEKSMWVCVSDNFDVKTILKNMVALLTKDNIADKNLEELQNMLRANLTGTRYLLVLDDIWNESYEKWDELRTYLMCGAQGSKVVVTTRSKIVAQTMGVSDPYVLSGLTPEESWGLLKNITFPDDAIGVNQTLEPIGKKIAEKCKGVPLAIRSLGGILRSKREEREWIDVLQGDFWKLCEDKDSIMPVLKLSYNNLSPQQRQCFAYCSIFPQDWKLKKDELIQMWIAQGYLGCSVEEQCMEDVGNQFVNIFLMNSFFQDAELNDDGDVSGFKMHDLMHDLATQVAGNDCCYLDSRAKRCLGRPVHILVESDAFCMLESLDSSRLRTLIVLESNRNELDEEEFSVISNFKYLRVLKLRLLGSHKMLVGSIEKLKHLRHLDLTHCDGLKIHPKSTSNLVCLQTIKLLMCVGLSRKVLSKLINLRHLVIKGSMTFKDETPSRFKKLSIQQYKGLTLSNWTSPLTNINEIYLDGCLNLRYLSPLEHLPFLKSLELRYLLQLEYIYYEDPILHESFFPSLEILQLIACSKLKGWRRMRDDLNDINSSHHLLLPHFPSLSKLTIWSCERLTFMPTFPNIKKRLELGLVNAEIMEATLNIAESQYSIGFPPLSMLKSLKINATIMGIEKAPKDWFKNLTSLENLHFYFLMSKNLQVIEMWFKDNLNCLPSLRTINFEGIVGDVVKALPDWICNISSLQHLKVKECRDLVDLPDGMPRLTKLHTLEIIGCPLLIDECQREASVTCSKIAHIPNIITRGD* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0227 969 Gene3D Ribonuclease Inhibitor 809 964 IPR032675 -
Mtr8g0227 969 Gene3D - 411 502 IPR036388 -
Mtr8g0227 969 Gene3D Ribonuclease Inhibitor 528 629 IPR032675 -
Mtr8g0227 969 Gene3D Ribonuclease Inhibitor 630 808 IPR032675 -
Mtr8g0227 969 CDD RX-CC_like 7 132 IPR038005 -
Mtr8g0227 969 Gene3D - 148 319 IPR027417 -
Mtr8g0227 969 PANTHER OS05G0414200 PROTEIN 36 857 - -
Mtr8g0227 969 PANTHER DISEASE RESISTANCE PROTEIN RP 36 857 IPR044974 GO:0006952
Mtr8g0227 969 PRINTS Disease resistance protein signature 192 207 - -
Mtr8g0227 969 PRINTS Disease resistance protein signature 265 279 - -
Mtr8g0227 969 PRINTS Disease resistance protein signature 362 376 - -
Mtr8g0227 969 PRINTS Disease resistance protein signature 588 604 - -
Mtr8g0227 969 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 425 IPR027417 -
Mtr8g0227 969 Pfam NB-ARC domain 170 413 IPR002182 GO:0043531
Mtr8g0227 969 Pfam Rx N-terminal domain 11 94 IPR041118 -
Mtr8g0227 969 Coils Coil 35 55 - -
Mtr8g0227 969 Gene3D - 10 132 - -
Mtr8g0227 969 Gene3D - 325 410 IPR042197 -
Mtr8g0227 969 SUPERFAMILY L domain-like 475 790 - -
Mtr8g0227 969 SUPERFAMILY L domain-like 741 944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0227 Mtr-Chr8 2584368 2587713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0227 189 515 WRKY Transcription Factor Family AT5G45050 23.810 2.44e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0227 - - mtr:MTR_8g027540 1295.03