Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0222 ATGGATATGGATGAGGATCAAGAGATGGAGAATTTCGGAACGGAGAAAGATTTCGAAGGTGGTCAATGGGTTAATGGTGAATTCTACTTTCGAAAGCGCCGAGAGAAAGCTCGAACTCAAACCAAAGACGATGTTCTATATGGAGTTTTTGGTGATTCCGAAGATGACGATGATGATGGGTATTCTAGTAAAAAGCGAAGAAAAGATTTTGGAAGGAAACAGGATCTCACTAAACCAGTGAATTTCATTTCAACTGGAAATTTTATGCCGGATAAGGATAATGTTGATGAGGATTTGAAAGAGCAGGATGATGGTGAAGATAGGCCTGGTTTTGGGTTAGGTTTTGGGTCGGCTAGTGTATCGGGGTCTGGTCTAGGATTTAATTCTGGTCGTGGTGTGAATGGTTCAGATAGGAATGATGATGAATCTGATGAGAATGATAATCGGGATGATAAATTTTTGCCTACTGCGTTTGGGAAGAAGATTAAGGAGGGAGCCATGAAGAGGGAGAAGGAGAGATTGGAGGAGAAGAAGAAGAAGAAGGGGAAGAAGCCGGGGATGGGTTTAGGTCAGGAGGGGTCTGTGGATGTTGGGAAATTCGAGAGTCATACAAAGGGAATTGGAATGAAGCTGCTTGAGAAGATGGGTTATAAAGGGGGTGGTCTTGGGAAGAATGAGCAGGGTATTTTAAATCCTATTGAAGCGAAGTTGAGGGCTAAAAATTCTGGTCTTGGATTTAACGAATCGAAGGGAACCACAATGCCGTTGCCTGCTTTGCAGACGGAGAAGAAGACTGAACCGGGAGTTGTGCAGCCTACAGTTGGAAGAACACGTTCGTGGTTAAAGCGGCCGAAGAAGAAGAATAAAGAAGAGGAAAAGTATGTAACTGCTGAGGAGTTGTTGGCTAGCAAGCAAGAAGAAGAATCAGAGGTTGTTCAGAAGATTTATGATATGAGGGGGCCGCAGGTACGAGTTTTAACAAATTTGTCTGATTTGAATGCCGAGGAGAAAGCAAAGGAAAATGATGTCCCAATGCCTGAGCTTCAGCATAACGTAGGACTAATAGTTCAGATTGCTGAAGCTTACATCCAAGAAATTGATAAAGATTTGAGGAAAGAGAGGGATATAGCACTTAGCTTGAAAAAAGAAAAGGAGAAGTTGGAAGCTGAGGCAGCGTTTCAAAAGATGCAGCTCGATAATTATGAAAAGATAATGAGTGTGCTGGACAGCGTTGGAGAAGAGAACACCTTAGGAACATTAACATTGGATTCCCTTGCTCAATGCTTTATGGACATGCACAAAAGATATGCTGAGGATTATAAGCTGTGTAATTTGTCATGCATTGCTTGCTCATATGCTTTGCCTTTGTTTATCAGAATGTTCCAAGGATGGGATCCTCTTCGAAATCCATCTCATGGTTTGGAGTTGGTATCACGGTGGAAGGCATTGCTTCAAGGAGATGATTGTTTTGATATATGGGACATGTCATCACCTTATACTCAATTGGTTTCAGAGGTTGTATTGCCAGCTGTTAGAATATCTGGTATCAATACCTGGCATGCACGGGATCCTGAACCAATGCTACGGTTTTTGGAGTCGTGGGAAAAATTGCTTCCTTCTTCAGTTCTTGCTACTATATTAGACAACATAGTCATGCCAAAACTATCAAGTGCAGTAGGTACTTGGGAACCACATCTTGAGACCATTCCTATCCACACATGGGTGCATCCATGGCTACCCCTGCTAGGGCACAAGCTGGAGGTTATCTACCAGACAATTCGTTTCAAATTGAGTACTGTTCTTGGTGCATGGCACCCAAGTGATGGTTCTGCATATGCTATATTGTCCCCTTGGAAGACTGTATTTGATTCTGATAGCTGGCAACAACTTATGCACCGTTTTATCGTACCAAAGCTGAAGGCTGTCTTGCAAGATGACTTCCAAGTGAATCCGGCAAGTCAGAATCTTGATCAATTTTATTGGGTTATGAACTGGGCTTCTGCTATTCCAATTCATCTGATGGTTGACACGATGGAGATCTTCTTTGCCAAGTGGCTTACGGTTTTGTATCGTTGGTTGTGCTCAAATCCTAACTTTGATGAAGTTACAAAATGGTATTTGGGCTGGAAAGAACTTATTCCGAAAGAACTTTTGGCAAATGAAAGTATTCGATACAAGCTCAACTGTGGTCTTGATATGATGAACCAGGCCGTTGAAGGTATGGAGGTTGTGCAACCTGGTTTGAAGGAGAAGATAAGCTATATCAGGGTAAGTGAGCAAAGGAAATTTGAGACTCAGCAGAAAGCAGCAGCCTCTGCTCAACAACAAGCTGCTGCAAGCATGGCTGGTGGCGCAGATGGTGTGAATGAAATGAGCGTGAAAGATCTTATTGAGGCTTATGCTCGGGATAATGGTTTACTGTTCAAACCTAAATCTGGTAGAACGCACAACGGTCATCAAATATATGGGTTTGGCAATGTCAGCATAATAATCGACTCTCTAAATCAAAAGGTCTATGCCCAAAATGAGGAGACATGGTCTTTAGAAACTCTTGAACGATTGCTAGAGTTACATAATAAATCCCTTAGTAAAAGACGCTGA 2601 0.4229 MDMDEDQEMENFGTEKDFEGGQWVNGEFYFRKRREKARTQTKDDVLYGVFGDSEDDDDDGYSSKKRRKDFGRKQDLTKPVNFISTGNFMPDKDNVDEDLKEQDDGEDRPGFGLGFGSASVSGSGLGFNSGRGVNGSDRNDDESDENDNRDDKFLPTAFGKKIKEGAMKREKERLEEKKKKKGKKPGMGLGQEGSVDVGKFESHTKGIGMKLLEKMGYKGGGLGKNEQGILNPIEAKLRAKNSGLGFNESKGTTMPLPALQTEKKTEPGVVQPTVGRTRSWLKRPKKKNKEEEKYVTAEELLASKQEEESEVVQKIYDMRGPQVRVLTNLSDLNAEEKAKENDVPMPELQHNVGLIVQIAEAYIQEIDKDLRKERDIALSLKKEKEKLEAEAAFQKMQLDNYEKIMSVLDSVGEENTLGTLTLDSLAQCFMDMHKRYAEDYKLCNLSCIACSYALPLFIRMFQGWDPLRNPSHGLELVSRWKALLQGDDCFDIWDMSSPYTQLVSEVVLPAVRISGINTWHARDPEPMLRFLESWEKLLPSSVLATILDNIVMPKLSSAVGTWEPHLETIPIHTWVHPWLPLLGHKLEVIYQTIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSDSWQQLMHRFIVPKLKAVLQDDFQVNPASQNLDQFYWVMNWASAIPIHLMVDTMEIFFAKWLTVLYRWLCSNPNFDEVTKWYLGWKELIPKELLANESIRYKLNCGLDMMNQAVEGMEVVQPGLKEKISYIRVSEQRKFETQQKAAASAQQQAAASMAGGADGVNEMSVKDLIEAYARDNGLLFKPKSGRTHNGHQIYGFGNVSIIIDSLNQKVYAQNEETWSLETLERLLELHNKSLSKRR* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0222 866 Pfam G-patch domain 204 245 IPR000467 GO:0003676
Mtr8g0222 866 MobiDBLite consensus disorder prediction 148 186 - -
Mtr8g0222 866 MobiDBLite consensus disorder prediction 1 20 - -
Mtr8g0222 866 MobiDBLite consensus disorder prediction 58 75 - -
Mtr8g0222 866 Coils Coil 287 307 - -
Mtr8g0222 866 PIRSF TFIP11 3 861 IPR024933 -
Mtr8g0222 866 PANTHER TUFTELIN-INTERACTING PROTEIN 11 9 854 - -
Mtr8g0222 866 ProSiteProfiles G-patch domain profile. 204 249 IPR000467 GO:0003676
Mtr8g0222 866 SMART G-patch_5 202 247 IPR000467 GO:0003676
Mtr8g0222 866 MobiDBLite consensus disorder prediction 35 197 - -
Mtr8g0222 866 Pfam Tuftelin interacting protein N terminal 6 104 IPR022159 -
Mtr8g0222 866 Pfam GC-rich sequence DNA-binding factor-like protein 422 689 IPR022783 -
Mtr8g0222 866 Coils Coil 160 180 - -
Mtr8g0222 866 Coils Coil 370 404 - -
Mtr8g0222 866 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 9 854 IPR045211 GO:0000390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0222 Mtr-Chr8 2535848 2539071 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0222 191 248 C2H2 Transcription Factor Family AT5G26610 44.828 1.19e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0222 K13103 - gmx:100781621 1291.56