Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0204 ATGGACAGAGAATGGGGTTCAAAACCAGGAAGCGGCGGAGCAGCCACAGCTCAAAACGAAGCAATAGACCGCCGTGAACGACTCCGACGACTCGCTCTCGAAACAATAGATCTAGCAAAAGATCCCTATTTCATGCGAAATCATCTCGGTAGTTATGAATGTAAACTCTGTCTTACTCTTCACAACAACGAAGGTAACTACCTCGCTCATACTCAAGGGAAACGCCATCAAACCAATCTCGCTAAACGTGCTGCTCGTGAAGCTAAAGATGCTCCTACTCAACCTCAGCCTCATAAGAGGAAGGTTAACATGAAGAAATCTGTTAAGATTGGGAGGCCTGGGTATCGTGTGACTAAGCAATTTGATCCTGATACCAAGCAAAGATCTCTCCTTTTTCAGATTGAATATCCTGAGATCGAAGACCTCGCAAAGCCGAGGCATCGATTTATGTCCTCCTATGAGCAGAGGATTCAGCCATTTGATAAAAGATACCAGTATCTATTGTTTGCAGCTGAACCTTATGAAACAATTTCTTTCAAGGTACCAAGCACAGAAATTGACAAGTCCACTCCAAAGTTTTTCTCGCATTGGGACCCAGATTCAAAGATGTTCACACTGCAGTTGTATTTTAAAACCAAGCCACCAGAGGCAACCAAACCACAGCCGCCTGCCTCTGCACCCAATGGCACCACAGCACCTGGTGTTCCGCCAAGGCCTATGCCCCCACCACCACAAGCTCCACTACCACCACCACCACCTCCTCCACAAGGGCTACCTCCCGGTGCACCTATGGGTAATCCTCCACGGGCCCCTCCACCTCCAATGTCAGGATCAATGCCTCCACCACCTCCTATGGCTGCAAACGGTCCTAGACCTGGTGCGATGCCGCCTCTTCCACCGCCAGCCCCCATTGGGACCAGACCTCCATCAATGCCACCTCCACAAGGTTTTCCAGGCCAACAAATGCAGAGCTAA 975 0.4944 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKVNMKKSVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRIQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEATKPQPPASAPNGTTAPGVPPRPMPPPPQAPLPPPPPPPQGLPPGAPMGNPPRAPPPPMSGSMPPPPPMAANGPRPGAMPPLPPPAPIGTRPPSMPPPQGFPGQQMQS* 325
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0204 324 SMART CactinC_cactus_3 89 217 - -
Mtr8g0204 324 MobiDBLite consensus disorder prediction 213 324 - -
Mtr8g0204 324 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
Mtr8g0204 324 Pfam Zinc-finger of C2H2 type 52 76 - -
Mtr8g0204 324 MobiDBLite consensus disorder prediction 216 316 - -
Mtr8g0204 324 Gene3D - 93 218 - -
Mtr8g0204 324 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Mtr8g0204 324 MobiDBLite consensus disorder prediction 1 21 - -
Mtr8g0204 324 Gene3D Classic Zinc Finger 46 89 - -
Mtr8g0204 324 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Mtr8g0204 324 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 317 - -
Mtr8g0204 324 SUPERFAMILY beta-beta-alpha zinc fingers 48 82 IPR036236 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0204 1 254 C2H2 Transcription Factor Family AT2G32600 79.134 1.77e-132 376
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0204 K12826 - egr:104425946 444.121