Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0182 ATGGACTACATGGCAACCATTAGTCTGACATGCTTGTTGGAACATGTAACTTTACCTCTAGAATTTGGCTTTCTTGTGATATTGTTAGTCCAACTCCTAAGAAATTGCATGAACAACATCACCAAGCAAAACAAGGTCTCAGAAGTGCATCCAAATTGCATAAAATTTGGTTTTCCTTACAAAATAAGCTTAGCTTGCACCACTTTATTGTTGGCTATTCATGCCTTAATGCTAATATTGATGCTCAATCATGAGCCTCAGTGTACTTCAAAACTTCAAACTTATACATCAGAGATCATTCAAGTGTTATCCTCTGCGACTATTCTAATAGCAATATGCAAGATGTCAAAAACTAATGCTAATTTCCATTGGATTGTAAGGCTTTGGTGGTTTTTCAGTTTCCTTTTGAGCATTATCAGCACAGCCCTTCATGTCAATTTCAGTATAAAAAACAAGGGTGTTATTGGTATAAAAGAATATGCAGATTTCCTTGGTTTGGTTGTTTCAACATGTCTGTTAGTTGTTTCAACAAGAGGGAAAACAGGCATAGTCATCATTGCAACAAATGGTAGCATATCTGAACCACTTTTGGAAGAGAAAAATGAGAAACATTCTTCTGAGTGTCTAAAAGAATCACCATATGGAAAAGCTACAATTTTTCAATTGATAAATTTCTCATGGCTCAATCCGTTGTTTGCGGTAGGGTATAAGAAACCTCTTCAATTGGATGACATTCCTAATCTTGACATCAAGGACTCTGCTGAATATCTAAATTGCGCATTTGATGAGAGTCTTAGACAAGTTAAGGAAAAAGATGGAACTACAAATCCATCTATCTACAAGGCAATCTATTTATTTGCTAGAAAAAAAGCGGCAATCAACGCGCTTTTTGCAATAATAAGCGCTTCAGCATCTTATGTTGGTCCATATTTGATCACTGACTTTGTGAATTTCCTCACCGAGAAGGACAGTCGCGGACTAAAGAGCGGATACCTTTTGTCGCTAGGTTTCTTATGTGCTAAAATGGTTGAGGTTATAGCTCAGAGGCAATGGATTTTCGGTGCTCGGCAATTAGGCCTCCGCCTAAGGGCCGCATTGATATCACATGTATACAAGAAGGGCTTACATCTGTCAAGCCGATCGCGTCAAAGTCATTCTGGTGGTGAGATAATGAACTACATGAGTGTAGATGTGCAGAGGATTACGGATTTCGTTTGGTATGTAAATGTTATTTGGATGCTGCCGATACAAATTTCCTTAGCTGTTATCATTTTGCAGACAAATCTTGGATTAGGTTCATTGGCTGCATTAGCTGCTACACTAGCAGTTATGACTTTGAACATACCTTTAACGAAAATACAGAAAAGATACCAAACCAAGATCATGGATGCAAAAGACAACAGAATGAAGACCACTTCAGAAATTCTCAAAAACATGAGGACTTTGAAATTTCAAGCATGGGATAGTGAGTTTTTCCAAAGGATAGAAGCATTGAGAAGTGTTGAATATGGTTGGTTATCAAAGTCATTAAGACAACAGGCATTTTCGGCTTTTATCTTCTGGGGTTCACCTACATTCATTTCAGTGATAACCTTTTGGACATGCATGTTCATAGGGATTGAGCTGACAGCCGGAAGGGTCTTATCCGCATTTGCGACATTCCGAATGTTACAAGATCCTATGTTTAGTCTACCTGATCTACTCAATGTCATTGCCCAAGGAAAAGTTTCCGGCGATAGGATCGCTTCTTTTCTTAAGAAGGAAGAAATCCAACATGACGTGATTGAATATGTTTCTAAGGACAAAACAGAATTTGATGTAGTTATTGAGAAAGGAAGATTCAGTTGGGATCCTGAGACAACAATTCCAACACTTGATGAAATTGAGTTGAAAGTTAAGAGAGGAATGAAGGTTGCAATTTGTGGTTCTGTCGGTTCCGGGAAATCTAGTATGCTCTCCGGAGTTTTGGGAGAGATATTTAAACAATCAGGGAACGTTAAGATTAGTGGAACAAAGGCTTATGTTCCACAATCAGCATGGATACTTACCGGAAATATTAGGGACAACATAACCTTTGGAAAAGAGTTCGAAGAAGATAAGTATGAAAAAACTGTTGAAGCATGTGCTTTGAAAAAGGACTTTGAGCTATTCTCATGTGGTGATTTGACTGAGATTGGTGAAAGAGGGATTAATATGAGTGGTGGACAGAAACAAAGAATACAGATAGCTAGAGCTGTTTATCAAGATGCTGACATATACCTTTTTGATGATCCTTTTAGTGCTGTCGATGCTCATACCGGCACTCACCTCTTTAAGGAATGTCTTCTGGGGATTCTCAAAGAAAAAACTATACTTTTTGTTACACACCAAGTTGAGTTTCTCCCAGCAGCAGACCTCATTCTGGTGATGCAAAATGGAAGGATTGCACAAGCTGGAACATTTGAAGAACTTCTAAAGCAAAATATAGGATTTGAATCATTAGTTGGTGCTCATAGCAAAGCACTAGAGTCAGTTCTTATGGTTGGAAATTCAAGTAAAGAAAATTTAAATCCAATACCTGAAGGAGAATGCATCACCTACTCAAACTCAAGTTCTGAACTTTTGCACACACAACTTGACACAGTGCAAGAAAATTCTCCTACAGAAAGCAAAGGAAATAATGATGGAAAATTGGTTCAAGATGAAGAAAGAGAAACAGGAAGCATATCAAAAGAAGTTTATTGGTCTTATTTGACAACCGTTAAAGGAGGAATTCTTGTTCCAATCATACTATTGGCACAGTCTTCATTCCAAATACTTCAGATTGGTAGTAACTATTGGATGGCTTGGGTCTGTCCTACAAAATCTGATGCTAAGCCTATATTTGATATGAATTTCATACTACTTATTTATATGGTACTTTCTGTTGCTGGTTCCCTTTGCGTTCTTCTGAGAGCCACGTTGGTGTTAAATGTTGGACTTTGGACAGCACAAACTTTTTTCACAAGAATGTTGCATAATGTGCAACGAGCCCCGATGTCATTTTTTGATTCTACCCCAACTGGAAGAATCTTGAACAGGGCCTCCACAGATCAAAGTGTGCTTGACATGGAAATGTTACACAGAATAGGATCGTGTGCTTCCTCAATAATACAAATTCTTGGCACTATTGCGGTGATGTGTCAAGCGGCTTGGCAAGTATTTATCATCTTCATTCCAGTAACTGCAATCTGCATATGGTATCAACGATATTATAATCCGACAGCAAGAGAACTGGCTCGCTTAGCACAGATACAAATTACTCCAATTCTCCACCATTTTTCAGAATCTTTAGCAGGAGCTGCATCAATACGAGCTTTCGATCAAGAAGGCCGCTTCATGAGCACAAATCTTGTCCTTCTAGATGGCTTCTCAAGGCCATGGTTTCATAACGTGTCTGCAATGGAATGGCTCTCTTACAGATTGAACTTGCTTTCAAATTTTGTTTTTGCCTTTTCACTTGTCTTACTAGTGAGCCTCCCTGAAGGTTTCATAAATCCAAGCATTGCAGGGTTAGCAGTAACATATGGAATCAATTTGAATGTCTTGCAAGCTTCAGTTATCTGGAACATTTGCAATGCAGAAAACAAGATGATATCAGTTGAAAGAATTCTTCAATATACAAATATCGCAAGTGAATCACCTCTTGTGATTGAAGACTGCCGGCCGCCAAGAAACTGGCCAGAAACTGGAACAATATGTTTCCAAAATTTGCAGATACGATACGCTGAACATCTACCATCTGTGTTGAAAAATATCACTTGTACATTTCCTGGAAGGAAGAAAATAGGTGTTGTAGGACGAACTGGCAGTGGTAAATCAACCCTCATACAGGCAATTTTCAGGATTGTTGAACCAAGAGAGGGATGCATTGTGATCGACAATGTAGACATATGTGAGATAGGTCTCCATGACTTAAGGTCAAAGCTCAGCATTATCCCACAGGATCCAGCCTTGTTTGAAGGCACAGTCAGAGGAAACCTGGACCCTCTGGAGCAATACTCTGACAGTGAAGTGTGGGAGGCATTAGATAAATGTCAGCTAGGTCACCTAGTGAGGGCCAAGGAAGAGAAGTTGGACTCCCCAGTGGTTGAAAATGGTGATAACTGGAGTGCTGGACAAAGACAATTATTTTGCCTTGGAAGAGCCTTGTTGAAGAAAAGCAGCATATTAGTACTAGATGAAGCAACAGCCTCGGTGGATTCTGCAACTGACGGAGTGATACAGGATATCATCTGCCAACAGTTTAACAATCGAACAGTTGTCACAATAGCTCATCGAATCCACACAGTTATTGACAGCGACTTGGTTTTGGTCCTCAGTGATGGGAGAATTGCAGAATATGATGAACCATCAAAGTTACTTGAAAGAGAAGATTCATTTTTCTACAAACTTATAAAGGAGTACTCTAGCAGATCCCATAGCTTCAATAACTTGGCAACTCAACATGTCCAAGACAGGGAATAA 4485 0.3906 MDYMATISLTCLLEHVTLPLEFGFLVILLVQLLRNCMNNITKQNKVSEVHPNCIKFGFPYKISLACTTLLLAIHALMLILMLNHEPQCTSKLQTYTSEIIQVLSSATILIAICKMSKTNANFHWIVRLWWFFSFLLSIISTALHVNFSIKNKGVIGIKEYADFLGLVVSTCLLVVSTRGKTGIVIIATNGSISEPLLEEKNEKHSSECLKESPYGKATIFQLINFSWLNPLFAVGYKKPLQLDDIPNLDIKDSAEYLNCAFDESLRQVKEKDGTTNPSIYKAIYLFARKKAAINALFAIISASASYVGPYLITDFVNFLTEKDSRGLKSGYLLSLGFLCAKMVEVIAQRQWIFGARQLGLRLRAALISHVYKKGLHLSSRSRQSHSGGEIMNYMSVDVQRITDFVWYVNVIWMLPIQISLAVIILQTNLGLGSLAALAATLAVMTLNIPLTKIQKRYQTKIMDAKDNRMKTTSEILKNMRTLKFQAWDSEFFQRIEALRSVEYGWLSKSLRQQAFSAFIFWGSPTFISVITFWTCMFIGIELTAGRVLSAFATFRMLQDPMFSLPDLLNVIAQGKVSGDRIASFLKKEEIQHDVIEYVSKDKTEFDVVIEKGRFSWDPETTIPTLDEIELKVKRGMKVAICGSVGSGKSSMLSGVLGEIFKQSGNVKISGTKAYVPQSAWILTGNIRDNITFGKEFEEDKYEKTVEACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLFDDPFSAVDAHTGTHLFKECLLGILKEKTILFVTHQVEFLPAADLILVMQNGRIAQAGTFEELLKQNIGFESLVGAHSKALESVLMVGNSSKENLNPIPEGECITYSNSSSELLHTQLDTVQENSPTESKGNNDGKLVQDEERETGSISKEVYWSYLTTVKGGILVPIILLAQSSFQILQIGSNYWMAWVCPTKSDAKPIFDMNFILLIYMVLSVAGSLCVLLRATLVLNVGLWTAQTFFTRMLHNVQRAPMSFFDSTPTGRILNRASTDQSVLDMEMLHRIGSCASSIIQILGTIAVMCQAAWQVFIIFIPVTAICIWYQRYYNPTARELARLAQIQITPILHHFSESLAGAASIRAFDQEGRFMSTNLVLLDGFSRPWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVSLPEGFINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYTNIASESPLVIEDCRPPRNWPETGTICFQNLQIRYAEHLPSVLKNITCTFPGRKKIGVVGRTGSGKSTLIQAIFRIVEPREGCIVIDNVDICEIGLHDLRSKLSIIPQDPALFEGTVRGNLDPLEQYSDSEVWEALDKCQLGHLVRAKEEKLDSPVVENGDNWSAGQRQLFCLGRALLKKSSILVLDEATASVDSATDGVIQDIICQQFNNRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDEPSKLLEREDSFFYKLIKEYSSRSHSFNNLATQHVQDRE* 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0182 1494 SUPERFAMILY ABC transporter transmembrane region 908 1221 IPR036640 GO:0005524|GO:0016021
Mtr8g0182 1494 ProSitePatterns ABC transporters family signature. 732 746 IPR017871 GO:0005524
Mtr8g0182 1494 Gene3D ABC transporter type 1, transmembrane domain 882 1220 IPR036640 GO:0005524|GO:0016021
Mtr8g0182 1494 CDD ABCC_MRP_domain2 1237 1457 - -
Mtr8g0182 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 602 828 IPR027417 -
Mtr8g0182 1494 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1239 1473 IPR003439 GO:0005524
Mtr8g0182 1494 Pfam ABC transporter 1256 1404 IPR003439 GO:0005524
Mtr8g0182 1494 Pfam ABC transporter 625 759 IPR003439 GO:0005524
Mtr8g0182 1494 SMART AAA_5 634 807 IPR003593 -
Mtr8g0182 1494 SMART AAA_5 1265 1457 IPR003593 -
Mtr8g0182 1494 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 66 1484 - -
Mtr8g0182 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1231 1471 IPR027417 -
Mtr8g0182 1494 MobiDBLite consensus disorder prediction 874 897 - -
Mtr8g0182 1494 CDD ABCC_MRP_domain1 607 807 - -
Mtr8g0182 1494 Gene3D ABC transporter type 1, transmembrane domain 264 593 IPR036640 GO:0005524|GO:0016021
Mtr8g0182 1494 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 922 1202 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0182 1494 Pfam ABC transporter transmembrane region 934 1166 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0182 1494 Pfam ABC transporter transmembrane region 293 558 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0182 1494 SUPERFAMILY ABC transporter transmembrane region 288 589 IPR036640 GO:0005524|GO:0016021
Mtr8g0182 1494 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 603 830 IPR003439 GO:0005524
Mtr8g0182 1494 CDD ABC_6TM_ABCC_D1 293 581 IPR044746 GO:0140359
Mtr8g0182 1494 Gene3D - 1222 1475 IPR027417 -
Mtr8g0182 1494 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 292 573 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0182 1494 PANTHER - 66 1484 - -
Mtr8g0182 1494 CDD ABC_6TM_ABCC_D2 920 1214 IPR044726 GO:0140359
Mtr8g0182 1494 Gene3D - 605 836 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0182 Mtr-Chr8 2185323 2192685 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0182 595 851 Calmodulin-binding Proteins AT2G36910 29.537 1.55e-22 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0182 - - gmx:100817486 2446.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0182 8 2185323 2192685 Mtr8g0182 8 2185323 2192685 ECH