Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0180 ATGGCTTTGGAGAACTTCTACAGCATCTTATTTGGTGAAACAAAGCTAAGAAATTTTTCATGGACTACATGGCAGCCATTAGTCTCACCATGCTTGTTGGAACATGTAACTTTACCTCTAGAGTTTGGCTTTCTTGTGATATTGTTAGTCCAATTCATAAGAAATTGCATGAACAACATCACCAAGCAAAACAAGGTCTCAGAAGTGCATCCAAATTGCATAAAATTTGGTTTTCCTTACAAAATAAGCATAGCTTGCACCACTTCATTGTTGGCTATTCATGCCTTAATGCTAATATTGATGCTCAATCATGAGCCTCAGTGTACTTCAAAACTTCAAACTTATACATCAGAGATCATTCAAGTGTTATCATCTGCGACTATTCTAATAGCAATATGCAAGATGTCAAAAACAAATGCTAATTTCCATTGGATTGTAAGGCTTTGGTGGTTTTTCAGTTTCCTTTTGAGCATTATCAGCACAGCCCTTCATGTCCATTTCAGTATAAAAAACAAGGGTGTTATTGGTATAAAAGAATATGCAGATTTCCTTGGTTTGGTTGTTTCAACATGTCTGTTAGTTGTTTCAACAAGAGGGAAAACAGGCATAGTCATCATTGCAACAAATGGTAGCATATCTGAACCACTTTTGGAAGAGAAAAATGAGAAACATTCTTCTGAGTGTCTAAAAGAATCACCATATGGAAAAGCTACAATTTTTCAATTGATAAATTTCTCATGGCTCAATCCGTTGTTTGCGGTAGGGTATAAGAAACCTCTTCAATTGGATGACATTCCTAATCTTGACATCAAGGACTCTGCTGAATATCTAAATTGCGCATTTGATGAGAGTCTTAGAAAAGTTAAGGAAAAAGATGGAACTACAAATCCATCTATCTACAAGGCAATCTATTTATTTGCTAGAAAAAAAGCGGCAATCAACGCGCTTTTTGCAATAATAAGCGCTTCAGCATCTTATGTTGGTCCATATTTGATCACTGACTTTGTGAATTTCCTCACCGAGAAGGACAGTCGCGGACTAAAGAGCGGATACCTTTTGTCGCTAGGTTTCTTATGTGCTAAAATGGTTGAGGTTATAGCTCAGAGGCAATGGATTTTCGGTGCTCGGCAATTAGGCCTCCGCCTAAGGGCCGCATTGATATCACATGTATACAAGAAGGGCTTACATCTGTCAAGCCGATCGCGTCAAAGTCATTCTGGTGGTGAGATAATGAACTACATGAGTGTAGATGTGCAGAGGATTACGGATTTCGTTTGGTATGTAAACGTTATTTGGATGCTGCCGATACAAATTTCCTTAGCTGTTATCATTTTGCAGACAAATCTTGGATTAGGTTCATTGGCTGCATTAGCTGCTACACTAGCAGTTATGACTTTGAACATACCTTTAACGAAAATACAGAAAAGATACCAAACCAAGATCATGGATGCAAAAGACAACAGAATGAAGACCACTTCAGAAATTCTCAAAAACATGAGGACATTGAAACTTCAAGCATGGGATGGTGAGTTTTTCCAAAGGATAGAATCATTGAGAAGTGTTGAATATGGTTGGTTATCAAAGTCATTAAGACAACAGGCGTTTTCGGCTTTTATCTTCTGGGGTTCACCTACATTCATTTCAGTGATAACCTTCTGGACATGCATGTTCTTAGGAATTGAACTGACAGCCGGAAGGGTCTTATCTGCATTCGCGACATTCCGAATGTTACAAGATCCAATCTTCAGTCTACCTGATTTACTCAATGTCATTGCTCAAGGAAAAGTTTCCGTCGATAGGATTGCTTCTTTTCTTAAGAAGGAAGAAATCCAACATGATGTAATTGAATATGTTTCTAAGGACAAAACAGAATTTGATGTAGTTATTGAGAAAGGAAGATTCAGTTGGGATCCTGAGACAGCAATTCCAACACTTGATGAAATTGAGTTGAGAGTAAAGAGAGGAATGAAGGTTGCAATTTGTGGTTCTGTTGGTTCCGGGAAATCTAGTATGCTCTCAGGAGTTTTGGGAGAGATATTTAAACAATCAGGGAATGTTAAGATTAGTGGAACAAAGGCTTATGTTCCACAATCAGCATGGATACTTACTGGAAATATTAGGGACAATATAACCTTTGGAAAAGAGTTTGATGAAGATAAGTATGAAAAAACTGTTGAAGCATGTGCATTGAAAAAGGACTTTGAACTATTCTCATGTGGTGATTTGACTGAGATTGGTGAAAGAGGGATTAATATGAGTGGTGGACAGAAACAAAGAATACAGATAGCTAGAGCTGTTTATCAAGATGCTGACATATACCTTTTTGATGATCCTTTTAGTGCTGTCGATGCTCATACTGGCACTCACCTCTTTAAGGAATGTCTTTTGGGGATTCTCAAAGAAAAAACTATACTTTTTGTTACACACCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATTCTGGTGATGCAAAATGGAAGGATTGCACAAGCTGGAACATTTGAAGAACTTCTAAAGCAAAATATAGGATTTGAATTATTAGTTGGTGCTCATAGCAAAGCACTAGAGTCAGTTCTTACGGTTGGAAATTCAAGTCAAGCAAATTTAAATCCAATACCTGAAGGAGAATGCATCACCTACTCGAACTCAAGTTCTGAACTTTTACACACACAACTTGACACAGTGCAAGATAATCCTCCTACAGAAAGCAAAGGAAATAATGATGGAAAATTGGTTCAAGATGAAGAAAGAGAAACAGGAAGCATATCAAAAGAAGTTTACTGGTCTTATTTGACAACTGTTAAAGGAGGAATTCTTATTCCAATCATACTATTGGCACAGTCTTCTTTCCAAATACTTCAGATTGCTAGTAACTATTGGATGGCTTGGGTTTGTCCTACAAAATCTGATGCTAAGCCTATATTTGATATGAATTTCATACTACTTATTTATATGGTACTTTCTGTTGCTGGTTCCCTTTGTGTTCTCCTGAGAGCCACGTTGGTGTTAAATGTTGGACTTTGGACAGCACAAACTTTTTTCACAAGAATGTTGCATAATGTGCAACGAGCCCCCATGTCATTTTTTGATTCTACCCCAACTGGAAGAATCTTGAACAGGGCCTCCACAGATCAAGGTGTGCTAGACTTAGAAATGGCAAATAAAATAGGATGGTGTGCTTTCTCAATAATACAAATTCTTGGCACTATTGCGGTGATGTGTCAGGCAGCATGGCAAGTATTTATCATCTTCATTCCAGTAACTGCAATCTGCATATGGTATCAACGATATTATAATCCGACAGCAAGAGAACTGGCTCGCTTAGCACAGATACAAATTACTCCAATTCTCCACCATTTTTCAGAATCTTTAGCAGGAGCTGCATCAATACGAGCTTTCGATCAAGAAGGCCGTTTCATGAGCACAAATCTTGTTCTTCTGGATGGCTTCTCAAGGCCATGGTTTCATAACGTGTCTGCAATGGAATGGCTTTCTTACAGATTGAACCTGCTTTCAAATTTTGTTTTTGCCTTTTCACTTGTCTTGCTAGTGAGCCTCCCTGAAGGTTTCATAAATCCAAGTATTGCAGGGTTAGCAGTAACATATGGAATCAATTTGAATGTCTTGCAAGCTTCGGTTATATGGAACATTTGCAATGCAGAAAACAAGATGATATCAGTTGAAAGAATTCTTCAATATACAAATATCGCAAGTGAATCACCTCTTGTGATTGAAGACTCCCGGCCGCCAAGAAACTGGCCAGAAACTGGAACAATATGTTTCCAAAATTTGCAGATACGATACGCTGAACATCTACCATCTGTGTTGAAAAATATCACTTGCACTTTTCCTGGAAGGAAGAAAATAGGTGTTGTAGGACGAACTGGCAGTGGAAAATCAACCCTCATACAGGCAATTTTCAGGATTGTTGAACCAAGAGAGGGATGCATTATGATTGACAATGTGGACATATGTGAGATAGGTCTCCATGACTTAAGGTCAAGGCTCAGCATTATCCCACAGGATCCAGCCTTGTTTGAAGGCACAGTCAGAGGAAACCTGGACCCTCTGGAGCAATACTCTGACAGTGAAGTGTGGGAGGCACTAGATAAATGTCAGCTAGGTCACCTAGTGAGGGCCAAGGAAGAGAAGTTGGACTCCCCAGTGGTTGAAAATGGTGATAATTGGAGTGCTGGACAAAGGCAATTATTTTGCCTTGGAAGAGCTTTGCTGAAGAAAAGCAGCATTTTAGTACTAGATGAAGCAACAGCCTCAGTGGACTCTGCAACTGATGGGGTGATACAGGATATCATTTGTCAAGAGTTCAACAATCGAACAGTTGTCACAATAGCTCATCGAATCCACACAGTCATCGATAGTGACTTGGTTTTAGTTCTCAGCGATGGGAGAATTGCAGAATATGATGAACCATCAAAGTTACTTGAAAGAGAAGATTCCTTCTTCTACAAACTTATAAAAGAGTACTCTAGCAGATCCCATAGCTTCAACAACTTGGCAACTCAACATGTCCAAGACAGGGAATAA 4545 0.3877 MALENFYSILFGETKLRNFSWTTWQPLVSPCLLEHVTLPLEFGFLVILLVQFIRNCMNNITKQNKVSEVHPNCIKFGFPYKISIACTTSLLAIHALMLILMLNHEPQCTSKLQTYTSEIIQVLSSATILIAICKMSKTNANFHWIVRLWWFFSFLLSIISTALHVHFSIKNKGVIGIKEYADFLGLVVSTCLLVVSTRGKTGIVIIATNGSISEPLLEEKNEKHSSECLKESPYGKATIFQLINFSWLNPLFAVGYKKPLQLDDIPNLDIKDSAEYLNCAFDESLRKVKEKDGTTNPSIYKAIYLFARKKAAINALFAIISASASYVGPYLITDFVNFLTEKDSRGLKSGYLLSLGFLCAKMVEVIAQRQWIFGARQLGLRLRAALISHVYKKGLHLSSRSRQSHSGGEIMNYMSVDVQRITDFVWYVNVIWMLPIQISLAVIILQTNLGLGSLAALAATLAVMTLNIPLTKIQKRYQTKIMDAKDNRMKTTSEILKNMRTLKLQAWDGEFFQRIESLRSVEYGWLSKSLRQQAFSAFIFWGSPTFISVITFWTCMFLGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLKKEEIQHDVIEYVSKDKTEFDVVIEKGRFSWDPETAIPTLDEIELRVKRGMKVAICGSVGSGKSSMLSGVLGEIFKQSGNVKISGTKAYVPQSAWILTGNIRDNITFGKEFDEDKYEKTVEACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLFDDPFSAVDAHTGTHLFKECLLGILKEKTILFVTHQVEFLPAADLILVMQNGRIAQAGTFEELLKQNIGFELLVGAHSKALESVLTVGNSSQANLNPIPEGECITYSNSSSELLHTQLDTVQDNPPTESKGNNDGKLVQDEERETGSISKEVYWSYLTTVKGGILIPIILLAQSSFQILQIASNYWMAWVCPTKSDAKPIFDMNFILLIYMVLSVAGSLCVLLRATLVLNVGLWTAQTFFTRMLHNVQRAPMSFFDSTPTGRILNRASTDQGVLDLEMANKIGWCAFSIIQILGTIAVMCQAAWQVFIIFIPVTAICIWYQRYYNPTARELARLAQIQITPILHHFSESLAGAASIRAFDQEGRFMSTNLVLLDGFSRPWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVSLPEGFINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYTNIASESPLVIEDSRPPRNWPETGTICFQNLQIRYAEHLPSVLKNITCTFPGRKKIGVVGRTGSGKSTLIQAIFRIVEPREGCIMIDNVDICEIGLHDLRSRLSIIPQDPALFEGTVRGNLDPLEQYSDSEVWEALDKCQLGHLVRAKEEKLDSPVVENGDNWSAGQRQLFCLGRALLKKSSILVLDEATASVDSATDGVIQDIICQEFNNRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDEPSKLLEREDSFFYKLIKEYSSRSHSFNNLATQHVQDRE* 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0180 1514 Pfam ABC transporter transmembrane region 952 1186 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0180 1514 Pfam ABC transporter transmembrane region 313 577 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0180 1514 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 84 1504 - -
Mtr8g0180 1514 SUPERFAMILY ABC transporter transmembrane region 927 1241 IPR036640 GO:0005524|GO:0016021
Mtr8g0180 1514 Gene3D - 625 855 IPR027417 -
Mtr8g0180 1514 PANTHER - 84 1504 - -
Mtr8g0180 1514 CDD ABCC_MRP_domain2 1257 1477 - -
Mtr8g0180 1514 Gene3D ABC transporter type 1, transmembrane domain 902 1240 IPR036640 GO:0005524|GO:0016021
Mtr8g0180 1514 CDD ABCC_MRP_domain1 627 827 - -
Mtr8g0180 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1259 1493 IPR003439 GO:0005524
Mtr8g0180 1514 Gene3D ABC transporter type 1, transmembrane domain 284 613 IPR036640 GO:0005524|GO:0016021
Mtr8g0180 1514 CDD ABC_6TM_ABCC_D1 313 601 IPR044746 GO:0140359
Mtr8g0180 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 842 IPR027417 -
Mtr8g0180 1514 Pfam ABC transporter 1276 1424 IPR003439 GO:0005524
Mtr8g0180 1514 Pfam ABC transporter 645 779 IPR003439 GO:0005524
Mtr8g0180 1514 SMART AAA_5 654 827 IPR003593 -
Mtr8g0180 1514 SMART AAA_5 1285 1477 IPR003593 -
Mtr8g0180 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 942 1222 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0180 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 850 IPR003439 GO:0005524
Mtr8g0180 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 312 593 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0180 1514 MobiDBLite consensus disorder prediction 895 917 - -
Mtr8g0180 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1250 1491 IPR027417 -
Mtr8g0180 1514 CDD ABC_6TM_ABCC_D2 940 1234 IPR044726 GO:0140359
Mtr8g0180 1514 ProSitePatterns ABC transporters family signature. 752 766 IPR017871 GO:0005524
Mtr8g0180 1514 SUPERFAMILY ABC transporter transmembrane region 308 609 IPR036640 GO:0005524|GO:0016021
Mtr8g0180 1514 Gene3D - 1242 1495 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0180 Mtr-Chr8 2157696 2168000 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0180 615 867 Calmodulin-binding Proteins AT2G36910 29.964 8.08e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0180 - - gmx:100817486 2511.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0180 8 2157696 2168000 Mtr8g0180 8 2157696 2168000 ECH