Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0169 ATGGCTTCCACATTCCTCACCATACCAACAACTCCCTTCCTTCACAAAACTCCCACCGCTTCTTTCTCAACCCAGAGACTCCCAATTTTGAAGAGGAACTCTTTGAAGGTTAATGCAATTGCCAAGAAATGGGAACCCTCTAAGGTTGTGCCTCAGGCTGATAGGGTTCTTATTCGTCTCGAGGAGTTATCAGAAAAAACCGCCGGTGGAATTTTGTTGCCCAAGTCAGCTGTTAAATTTGAGCGATATCTTGTGGGAGAAGTCCTAAATGTTGGTGCCGAGGCTGAAAATGTAAAAGCTGGCTCGAAGGTACTATTCACCGACATAAATGCTTATGAGGTGGATTTGGGGACTGATGCAAAGCACTGCTTCATTAAATCAAGTGACTTGTTGGCCGTCGTTGAGTAG 408 0.451 MASTFLTIPTTPFLHKTPTASFSTQRLPILKRNSLKVNAIAKKWEPSKVVPQADRVLIRLEELSEKTAGGILLPKSAVKFERYLVGEVLNVGAEAENVKAGSKVLFTDINAYEVDLGTDAKHCFIKSSDLLAVVE* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0169 135 SUPERFAMILY GroES-like 48 135 IPR011032 -
Mtr8g0169 135 Pfam Chaperonin 10 Kd subunit 48 134 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mtr8g0169 135 SMART Cpn10_2 48 134 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mtr8g0169 135 PANTHER 10 KDA CHAPERONIN 1, CHLOROPLASTIC-RELATED 18 134 - -
Mtr8g0169 135 Gene3D GroES chaperonin 44 135 IPR037124 GO:0006457
Mtr8g0169 135 PANTHER 10 KDA HEAT SHOCK PROTEIN 18 134 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mtr8g0169 135 CDD cpn10 48 134 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0169 38 135 Calmodulin-binding Proteins AT5G20720 31.731 7.94e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0169 K04078 - gmx:100500567 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0169 8 1961179 1965088 Mtr8g0169 8 1961179 1965088 ECH