Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0147 ATGTTCCGCCGCGCAACATCTTCCCTTTTCTCACGCGCCGTCGCCACTCGCCGCTTCTCCACCGATGTAGCTACCCCCGTCACTGATTCCTCCTTCGTTGAAGCTTGGAATAAAGTTAGCCCCAATCTTGATCCACCTAAGACACCAGTCGCTTTCATCAAATCTCGTCCTCCTATTCCTTCTACTCTTCCAACCAAACTCACAGTCAATTTCGTTCTTCCTTATGCTTCTCAATTGTCCGCTAAAGAGGTTGATCTGGTAATAATCCCAGCCACAACAGGCCAGATGGGTATCCTCCCAGGACATGTTTCAACAATTGCAGAGTTGAAACCTGGGGTCATGATTGTACAAGAAGGGAATGATTCGACCAAGTATTTTGTAAGCAGTGGCTTCGCTTTCGTCCATGCAAACTCTGTTGCTGATATAATCGCTGTTGAGGCCGTTCCACTGGATCAAATTGATGCAAGCCTAGTGCAGAAGGGTCTTCAAGAGTTCACTCAGAAGCTCAGCTCAGCGACAACTGATTTGGAGAAAGCTGAAGCTCAGATTGGAGTTGATGTCCATAGTGCTCTCAACTCAGCTCTTACAGCCTAA 594 0.4747 MFRRATSSLFSRAVATRRFSTDVATPVTDSSFVEAWNKVSPNLDPPKTPVAFIKSRPPIPSTLPTKLTVNFVLPYASQLSAKEVDLVIIPATTGQMGILPGHVSTIAELKPGVMIVQEGNDSTKYFVSSGFAFVHANSVADIIAVEAVPLDQIDASLVQKGLQEFTQKLSSATTDLEKAEAQIGVDVHSALNSALTA* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0147 197 Gene3D - 61 154 IPR036771 -
Mtr8g0147 197 CDD F1-ATPase_delta 67 190 IPR001469 GO:0015986|GO:0045261|GO:0046933
Mtr8g0147 197 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 1 197 - -
Mtr8g0147 197 Coils Coil 162 182 - -
Mtr8g0147 197 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 197 IPR001469 GO:0015986|GO:0045261|GO:0046933
Mtr8g0147 197 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 67 148 IPR036771 -
Mtr8g0147 197 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 72 182 IPR001469 GO:0015986|GO:0045261|GO:0046933
Mtr8g0147 197 Hamap ATP synthase epsilon chain [atpC]. 65 185 IPR001469 GO:0015986|GO:0045261|GO:0046933
Mtr8g0147 197 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 67 139 IPR020546 GO:0015986
Mtr8g0147 197 Gene3D - 155 196 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0147 1 197 Primary Pumps ATPases AT5G47030 70.244 2.12e-101 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0147 K02134 - gmx:100799603 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0147 8 1786959 1791059 Mtr8g0147 8 1786959 1791059 ECH