Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0144 ATGAAGTGTTTTTCCTATTTCAAATATAAACACAAAGGTAGGGGTCAAAGATCAGCACCTGAGCTAGAAGAGCAAGAGAAACATCAGTTTTCAGGATCTGAAAGAGTTACAAAGTCTTCTTGTTCATCTACCTCTTCACCTAGGGGTATACCAAAACTTTATGAGGAGAAGGGCCATAATTTGAGGGTTTTTTCTTTCTCAGAGCTCAGCCGTGCGACGAGTGACTTCAATAGGCTTCTTAAGATAGGAGAAGGTGGTTTTGGAAGTGTATTTAAAGGTTCAATTAAGCCTGTTGGTGGAAATGGTGATCCTGTCTTAGTTGCCATCAAAAGGCTTAACAAGGATGCATTGCAGGGTCATAAGCAATGGTTAACTGAAGTTCAGTTTCTTGGTGTTGTGGAGCATCCAAACCTTGTCAAGCTTATTGGATATTGTGCTGTGGATGGTGAGAGAGGGATTCAAAGATTACTTGTGTATGAATACATGCCGAATCGAAGCTTAGAAGCTCATCTGTTCAACAAATCTTATGATCCTGTTCCTTGGAAAACAAGACTTGAAATTGCACTTGGAGCAGCTCAAGGCTTATCTTATCTGCATGAAGAATTAGAAGTCCAGATAATATATCGCGATTTTAAATGTTCAAATGTCTTGCTGGATGAAAATTTTAAGCCAAAACTTTCTGATTTCGGACTCGCTAGGGAGGGACCGGAAGCTGGGGATACCCATGTTTCAACTGCTGTAATGGGGACACATGGTTATGCCGCTCCAGATTACATTGAGACAGGCCATCTCACCGCCAAGAGTGATGTGTGGAGTTTTGGTGTTGTGCTATACGAAATGCTTACCGGTAGGCGTTCATTGACAAGAAACCGACCAAAAACGGAACAGAAACTATTGGAGTGGGTGAAGAACTACCCTCCTGATAGCAAAAAGTTTGACATGATAATGGATCCAAGACTTGAAGGACAATATTCCATTAACGCGGCACGAAAACTCGCCAAACTTGCGGATCATTGTCTGCGTAAGAGCTCGAAAGATAGGCCGAGAATGAGTCAGGTAGTAGAGAGATTGAAGGAAATAATCCAAGCTTCTGATAAAGAACAAGAAGAACATCATGACCCTAATGAGATTAACAGTGCTGAGGTATCTGAAAATGATTCATTTGAGCATCAAGAAGAGTCAAATTCATCAGGCTCTACGGAGTTATGGAGAAAGAGAATGGAGCATCTTGCAAAACTTGGTGAACATGTGGAGGGTGCTAATAGAAAAATGTTTATGATTCAACAGAGAGCCAATGTGTCTACATAG 1308 0.4121 MKCFSYFKYKHKGRGQRSAPELEEQEKHQFSGSERVTKSSCSSTSSPRGIPKLYEEKGHNLRVFSFSELSRATSDFNRLLKIGEGGFGSVFKGSIKPVGGNGDPVLVAIKRLNKDALQGHKQWLTEVQFLGVVEHPNLVKLIGYCAVDGERGIQRLLVYEYMPNRSLEAHLFNKSYDPVPWKTRLEIALGAAQGLSYLHEELEVQIIYRDFKCSNVLLDENFKPKLSDFGLAREGPEAGDTHVSTAVMGTHGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLTRNRPKTEQKLLEWVKNYPPDSKKFDMIMDPRLEGQYSINAARKLAKLADHCLRKSSKDRPRMSQVVERLKEIIQASDKEQEEHHDPNEINSAEVSENDSFEHQEESNSSGSTELWRKRMEHLAKLGEHVEGANRKMFMIQQRANVST* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0144 435 MobiDBLite consensus disorder prediction 34 49 - -
Mtr8g0144 435 MobiDBLite consensus disorder prediction 15 50 - -
Mtr8g0144 435 MobiDBLite consensus disorder prediction 362 391 - -
Mtr8g0144 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Mtr8g0144 435 PANTHER OS07G0495150 PROTEIN 27 420 - -
Mtr8g0144 435 Gene3D Phosphorylase Kinase; domain 1 51 161 - -
Mtr8g0144 435 MobiDBLite consensus disorder prediction 15 33 - -
Mtr8g0144 435 ProSitePatterns Protein kinases ATP-binding region signature. 82 110 IPR017441 GO:0005524
Mtr8g0144 435 Gene3D Transferase(Phosphotransferase) domain 1 162 387 - -
Mtr8g0144 435 SUPERFAMILY Protein kinase-like (PK-like) 59 379 IPR011009 -
Mtr8g0144 435 ProSiteProfiles Protein kinase domain profile. 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0144 435 CDD STKc_IRAK 82 360 - -
Mtr8g0144 435 MobiDBLite consensus disorder prediction 362 402 - -
Mtr8g0144 435 Pfam Protein tyrosine and serine/threonine kinase 81 357 IPR001245 GO:0004672|GO:0006468
Mtr8g0144 435 PANTHER OS01G0588500 PROTEIN-RELATED 27 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0144 Mtr-Chr8 1759174 1763564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0144 1 403 Glycoside Hydrolase AT3G07070 40.909 2.15e-95 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr8g0144 PK_Tyr_Ser-Thr 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0144 - - cam:101511022 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0144 8 1759174 1763564 Mtr8g0144 8 1759174 1763564 ECH