Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0141 ATGTCTATTCTTTCTTTAACCACTCTTCTACTCTACCGTAAAAAAAAAAAAACTACTCTTCTACTCTTCGGTAAAAAAAAACCTACTCTTCCGTACAAAAAAACTACTCTTCTTCTCTACCATCTTCATCTTCCTTGCGTGTGGTTACGATTTCATCGCAGCTTCCTTCAAAGATTCATTCAAGTTGAAGGACTGATGAGTAGGGGAAAGTTTCCTATTAACATTCTGTTTATTGGTGGTCATGTCGACTCCGGGAAGTCAACGACGGCTGGTCATTTGATCTACAAGCTTGGAGGTATTGAAAAGGATGTCATCGAGAGATTTGAGAAAGAAGCTGCTGAGATAAACAGGCGTTCATTCAAGTATGCTTGGGTGCTTGACAAGCTCAAGGCCGAGCGTGAAAGAGGTATCACAATTGACATTTCTCTATGGAAGTTTGAGACAACCAACTTCCTCTGCACTCTCATTGATGCCCCCGGACACAGGGATTTCATTAAGAACATGATCACCGGAGCATCCGAAGCTGACTGTGCCGTTCTTATCATTGACTCTACACCTGGTGGTTTTGAAGCTGGTTTTTGTAAGAATGGTCAGACCAATGAACATGTTCAACTTGCCTACGCTCTTGGTGTTTCACAAATGATCTGCTGCTGTAACAAGATGGATGCCACTACACCCAAATACTCCAAGGATAGGTATGAACAAATTGTGAGTCAAATTTCACCCTTTTTGAGCGAGGTTGGCTATAACCCAGGTAAAATTCCTTTTATCCCTATCTCTGGTTACGAGGGAGATAACATCATTGAGCACTCTTCTAACCTTGACTGGTACACGGGTCCCACCCTTCTTGAAGCTCTTGACCAAATCAGAAGGCCTAAGAGGTTAATATTCAGGCCTCTCCGATTACCACTTCAAGATGTCTACAAGATTGGAGGAATTGGAATTGTGCCTGTGGGACGCGTTGAGTCTGGTATCTTGAAACCTGGAATGGTGCTGACTTTTGCCCCAACTGGGCTCCAAACTGAAGTGAAGTCTGTGGAGATGCACCATGAAGCTCTCACCCGGGCTCTTCCTGGTGACATTGTGGGATTTAATGTTACGAATGTGTCTGCTAAGGATCTCAGGCGAGGCTATGTTGCCTCACACTCCCAGCGTGGCCCAGCTATGGAGGCTGCTAGAATCAATCAGTAA 1191 0.4425 MSILSLTTLLLYRKKKKTTLLLFGKKKPTLPYKKTTLLLYHLHLPCVWLRFHRSFLQRFIQVEGLMSRGKFPINILFIGGHVDSGKSTTAGHLIYKLGGIEKDVIERFEKEAAEINRRSFKYAWVLDKLKAERERGITIDISLWKFETTNFLCTLIDAPGHRDFIKNMITGASEADCAVLIIDSTPGGFEAGFCKNGQTNEHVQLAYALGVSQMICCCNKMDATTPKYSKDRYEQIVSQISPFLSEVGYNPGKIPFIPISGYEGDNIIEHSSNLDWYTGPTLLEALDQIRRPKRLIFRPLRLPLQDVYKIGGIGIVPVGRVESGILKPGMVLTFAPTGLQTEVKSVEMHHEALTRALPGDIVGFNVTNVSAKDLRRGYVASHSQRGPAMEAARINQ* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0141 396 Pfam Elongation factor Tu domain 2 316 379 IPR004161 GO:0005525
Mtr8g0141 396 Pfam Elongation factor Tu GTP binding domain 75 288 IPR000795 GO:0003924|GO:0005525
Mtr8g0141 396 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 127 142 IPR031157 -
Mtr8g0141 396 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 71 293 IPR000795 GO:0003924|GO:0005525
Mtr8g0141 396 CDD EF1_alpha 74 293 - -
Mtr8g0141 396 PRINTS GTP-binding elongation factor signature 75 88 IPR000795 GO:0003924|GO:0005525
Mtr8g0141 396 PRINTS GTP-binding elongation factor signature 134 142 IPR000795 GO:0003924|GO:0005525
Mtr8g0141 396 PRINTS GTP-binding elongation factor signature 154 164 IPR000795 GO:0003924|GO:0005525
Mtr8g0141 396 PRINTS GTP-binding elongation factor signature 170 181 IPR000795 GO:0003924|GO:0005525
Mtr8g0141 396 PRINTS GTP-binding elongation factor signature 214 223 IPR000795 GO:0003924|GO:0005525
Mtr8g0141 396 Gene3D Translation factors 296 383 - -
Mtr8g0141 396 CDD EF1_alpha_II 298 383 - -
Mtr8g0141 396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 314 IPR027417 -
Mtr8g0141 396 Gene3D - 57 294 IPR027417 -
Mtr8g0141 396 PANTHER TRANSLATION FACTOR 66 394 - -
Mtr8g0141 396 SUPERFAMILY Translation proteins 299 387 IPR009000 -
Mtr8g0141 396 PANTHER ELONGATION FACTOR 1-ALPHA 66 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0141 Mtr-Chr8 1722612 1724437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0141 66 392 Eukaryotic Initiation Factors Gene Family AT5G60390 77.676 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0141 K03231 - mesc:110601548 516.924