Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0107 ATGGATGGAGAAAGAGATGTTCCCAATTATGATCTCCAAGTTTCATTCACAAATACCCCTCAAGCTATTCATGAAATGGGTTTTGTTCAATTTGAAGAAAATCAAGTTCTTAGTTTCTTGTCACCCTCTACACAATCCCAACCTTCTCAACTTTCTCAATCTCTAAATTCCGGCCGTGGCACCACCAACGCCACTACCGGTGCAGCCGTCACAACTACCACCGTGGCTGCCGGGTTTAGCCATAATGATCTTGTCACTACTAGAACTCCTTGGAACAATGAACAGGTGAGAACTCTAGATCCCAAAGCTGTGAGTGATGAGAATTGCACTGGAAATACTAGTGATGGCAACAACACATGGTGGAGGAGTGGAGGAGCAGAGAAGAGCAAGGTGAAAGTGAGGAGGAAACTTAGAGAGCCAAGGTTTTGTTTCCAGACAAGAAGTGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAAAAAGTTGTCAAGAATAGTCTTCATCCAAGAAGTTATTATCGTTGCACACATAACAATTGTCGGGTGAAAAAAAGAGTTGAACGACTCTCAGAAGATTGTCGTATGGTAATAACCACTTATGAAGGCAGACACAATCACTCTCCTTGTGACGACTCTAATTCTTCTGAACACGAATGTTTTACGTCTTTTTGA 684 0.4211 MDGERDVPNYDLQVSFTNTPQAIHEMGFVQFEENQVLSFLSPSTQSQPSQLSQSLNSGRGTTNATTGAAVTTTTVAAGFSHNDLVTTRTPWNNEQVRTLDPKAVSDENCTGNTSDGNNTWWRSGGAEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0107 227 MobiDBLite consensus disorder prediction 104 125 - -
Mtr8g0107 227 ProSiteProfiles WRKY domain profile. 148 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g0107 227 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 225 IPR044810 GO:0003700
Mtr8g0107 227 SMART WRKY_cls 153 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g0107 227 MobiDBLite consensus disorder prediction 104 124 - -
Mtr8g0107 227 Gene3D WRKY domain 139 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g0107 227 Pfam WRKY DNA -binding domain 154 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g0107 227 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 12 225 - -
Mtr8g0107 227 SUPERFAMILY WRKY DNA-binding domain 145 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g0107 227 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0107 Mtr-Chr8 1265655 1270349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0107 3 227 WRKY Transcription Factor Family AT2G44745 56.652 9.42e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr8g0107 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0107 - - var:108347245 379.022