Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0089 ATGGAAAGAAATAGCCGTTCCGGGAAGAGGGGTAAAGAGTTGTATTATTTGATGATCCACAAGGCTGAGAAGAAGGAAGAGGCAAAACAGAGGCAACTGAGAGCTATCTTGAACAAACTAACTCCTCAGAATTTCGATAGACTTCTTGAACAAGTAAAAGCAGTTAATATTGACAACACGATCACTCTCAGTGGTGTCGTCTCACAAATCTTTGAGAAGGCTCTGATGGAACCTATCTACTGTGAAATGTATGCCAACTTCTGCTCACATTTAGCTTCCGAGTTGCCTGATTTGAGCATGGACAACGAAAAGATAAATTTTAAAAAGTTATTATTAAACAAATGCCAGGAGGAATTTGAGAGGGGTGAACGACAACAAAAAGAGGCAAATAAGGTTGATGAGGCCGAGGCCAAGGTTGAGGTCAATCTGTCAAATGAAGAAAGGGAGCAGAGAAGAACCAAGGAAAGAATGCGCATGTTAGGAAACATCAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATAAAGAAGTTAATAGGTCAGGGTCAGTATCCTGATGAGGAAGATGTTGAGTATCCTGATGACGAAGATGTTGAGGCTCTGTGCAAGCTGATGAGTATTATTGGGGAGATGATTGACCATCCCAAAACTAAGGAACATATGGGTGTATATTTCGAAAAGTTGAAAATATTATCAAACAACATGAATCTATCTTCTATGGTGAGGTTTATGTTGAAGGACGTAATTGATTTGAGAAGGAATAGATGGCAAGTAAGGAGGAAAGTTGATGGTCCAAAGAAAATTGAGGAGGTACACAGAGATGCTGTGGAAGAGAGGCAGGCTCAAGCACAAGCTGGTAGCATGGGTCGTGGTATGGGAAACAATCAATCTCCAAGAAGCAACCCCATGTTAAGGAACGATGATCGGAATCTCAACAGGCCTGTTGCAATTTCACCTCACACTCAGTCACAAGGGCCAATTGTCTCTCAAAATGCTTATTCAGATGAACGACTTCGGGACATGTGCTTATCAGCAATCAGAGAATACTACAGCTTCCAGCACAAGGTTGAGAAGAAGTACAAAATAGGTAAAGTGTCAAATGCAGAAGAGGCAAAGCAGAGGCAACTGAGAGCTATCTTGAACAAACTAACTCCTCAAAATTTCAATAGGCTTCTTGAACAGGTAAAAGCAGTTAATATTGACAACGCAATCAATCTCAGTGGTGTCGTCTCACAAATCTTCGAGAAGGCTCTGATGGAACCTATCTTCTGTGAAATGTATGCCAACTTTTGCTCACATCTGGCTTATCAGTTGCCTGATTTGAGTGTGGACAACGAAAAGATAACTTTTAAAAGGTTATTATTAAACAAATGCCAGAAGGAATTTGAGAGGGGTGAACGAGAAATAGAAGAGGATAATAAGGTTGATGAGGCCGAGGGTGAGGTCGAGCTGTCAAATGAAGAAAGGGAGCAGAGAAGAACCAAGGCAAGAAGGCGCATGTCAGGAAACATCAGATTTATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATTCATGAGTGTATAAAGAAGTTACCAGGTCTGTGTCAGGATCCTGATGAGAAAGATGTTGAGGCTCTGTGCAAGCTGATGAGTTCTATCGGGGAGATGATTGACCACCCCAAAGCTAAGGAACATATGGATGTATATTTCGAAAGTTTGAAAATATTATCAAACAACATGGATTTATCTTCTAGGGTGAGGTTTATGTTGAAAGATGTAATTGATTTGAGAGGGAATAGATGGCAAGTAATGAGGAAAGTTGATGAAAAGGTGACGAAGGGGTTTATCACGGCGATGAAAAGGTGGGGATTGGATCCGACGAAGAAAGTGATGTTTTTTATGATGGAGGTGGAGGAGAAAGTGTTGTTGGCTAGTAGGAATACTGGGACATTGAAGATTTTGACGCCGAGGACATTGAATTTGTATGATGTTTTGAATGCTGATAAGATTGTTTTTACTCCTGGTGCTGTGGATTATTTGAATGGTAGGTATGGGGATATTGAATAA 2085 0.4029 MERNSRSGKRGKELYYLMIHKAEKKEEAKQRQLRAILNKLTPQNFDRLLEQVKAVNIDNTITLSGVVSQIFEKALMEPIYCEMYANFCSHLASELPDLSMDNEKINFKKLLLNKCQEEFERGERQQKEANKVDEAEAKVEVNLSNEEREQRRTKERMRMLGNIRLIGELYKKKMLTERIMHECIKKLIGQGQYPDEEDVEYPDDEDVEALCKLMSIIGEMIDHPKTKEHMGVYFEKLKILSNNMNLSSMVRFMLKDVIDLRRNRWQVRRKVDGPKKIEEVHRDAVEERQAQAQAGSMGRGMGNNQSPRSNPMLRNDDRNLNRPVAISPHTQSQGPIVSQNAYSDERLRDMCLSAIREYYSFQHKVEKKYKIGKVSNAEEAKQRQLRAILNKLTPQNFNRLLEQVKAVNIDNAINLSGVVSQIFEKALMEPIFCEMYANFCSHLAYQLPDLSVDNEKITFKRLLLNKCQKEFERGEREIEEDNKVDEAEGEVELSNEEREQRRTKARRRMSGNIRFIGELYKKKMLTERIIHECIKKLPGLCQDPDEKDVEALCKLMSSIGEMIDHPKAKEHMDVYFESLKILSNNMDLSSRVRFMLKDVIDLRGNRWQVMRKVDEKVTKGFITAMKRWGLDPTKKVMFFMMEVEEKVLLASRNTGTLKILTPRTLNLYDVLNADKIVFTPGAVDYLNGRYGDIE* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0089 694 Coils Coil 464 504 - -
Mtr8g0089 694 MobiDBLite consensus disorder prediction 296 316 - -
Mtr8g0089 694 Pfam MIF4G domain 30 263 IPR003890 GO:0003723|GO:0005515
Mtr8g0089 694 Pfam MIF4G domain 382 605 IPR003890 GO:0003723|GO:0005515
Mtr8g0089 694 Gene3D - 373 605 - -
Mtr8g0089 694 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G 362 614 - -
Mtr8g0089 694 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G 19 293 - -
Mtr8g0089 694 MobiDBLite consensus disorder prediction 324 339 - -
Mtr8g0089 694 Pfam Ribosomal protein L4/L1 family 608 688 IPR002136 GO:0003735|GO:0005840|GO:0006412
Mtr8g0089 694 SMART if4_15 30 264 IPR003890 GO:0003723|GO:0005515
Mtr8g0089 694 SMART if4_15 382 606 IPR003890 GO:0003723|GO:0005515
Mtr8g0089 694 Coils Coil 19 39 - -
Mtr8g0089 694 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 362 614 IPR045208 GO:0003743
Mtr8g0089 694 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 19 293 IPR045208 GO:0003743
Mtr8g0089 694 SUPERFAMILY ARM repeat 24 266 IPR016024 -
Mtr8g0089 694 Coils Coil 112 132 - -
Mtr8g0089 694 Gene3D - 30 277 - -
Mtr8g0089 694 SUPERFAMILY ARM repeat 376 608 IPR016024 -
Mtr8g0089 694 MobiDBLite consensus disorder prediction 287 339 - -
Mtr8g0089 694 SUPERFAMILY Ribosomal protein L4 614 691 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mtr8g0089 694 Gene3D - 606 691 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mtr8g0089 694 MobiDBLite consensus disorder prediction 480 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0089 Mtr-Chr8 1025086 1028794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0089 363 614 Eukaryotic Initiation Factors Gene Family AT3G60240 66.667 2.61e-95 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0089 K03260 - oeu:111376180 673.7