Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0075 ATGAACACTAATGCTTGGAACACCAATGTTAATGCCCTAGATCACTTTGAACCTGCCACAACGACACTCTTTCATGACACATCAGCTCCGGCAGCCCTGGCACCGATTTCACGGAGTCCAAGTTTTCGGAGCATTTTCTTTGGGGAGAATTGGGCGGAGCTGCCGCTGAAGGAGGATGATACCGAAGACATGGTCATCTATGGAGCTTTGCGCGAAGCTGCTGCCACCACGGGCTGGTTCCCGCCTAGTAACAAAGTGGTGAACAATGTTGATATGGCGGTGAAAATAGAAGATCAAGGTCAAAGCAGTGGAACTTCATTGGCGAGTGTTGCTCACGTGCAACAAGTGCCAACGACTAGTAAAAGGTTAGGGTACCGTGGAGTTAGGAGAAGGCCTTGGGGAAAGTATGCGGCTGAGATAAGGGATCCTAAGAGAAATGGCGCGAGGGTGTGGCTTGGGACTTATGAAACGGCTGAGAATGCAGCTTTGGCTTATGATCGAGCTGCGTTTAAAATACGTGGCTCAAAAGCTAAGCTAAATTTTCCTCATTTGATCGACTCAGATTACACTGGGTCGGTTAAGTTCACACGGAAAGAGCGCTAG 603 0.4892 MNTNAWNTNVNALDHFEPATTTLFHDTSAPAALAPISRSPSFRSIFFGENWAELPLKEDDTEDMVIYGALREAAATTGWFPPSNKVVNNVDMAVKIEDQGQSSGTSLASVAHVQQVPTTSKRLGYRGVRRRPWGKYAAEIRDPKRNGARVWLGTYETAENAALAYDRAAFKIRGSKAKLNFPHLIDSDYTGSVKFTRKER* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0075 200 ProSiteProfiles AP2/ERF domain profile. 124 182 IPR001471 GO:0003700|GO:0006355
Mtr8g0075 200 SUPERFAMILY DNA-binding domain 124 183 IPR016177 GO:0003677
Mtr8g0075 200 Gene3D AP2/ERF domain 124 183 IPR036955 GO:0003700|GO:0006355
Mtr8g0075 200 PANTHER BNAC04G53270D PROTEIN 32 196 - -
Mtr8g0075 200 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Mtr8g0075 200 PRINTS Ethylene responsive element binding protein signature 164 184 IPR001471 GO:0003700|GO:0006355
Mtr8g0075 200 Pfam AP2 domain 124 174 IPR001471 GO:0003700|GO:0006355
Mtr8g0075 200 CDD AP2 125 184 IPR001471 GO:0003700|GO:0006355
Mtr8g0075 200 PANTHER DNA-BINDING DOMAIN 32 196 IPR044808 GO:0003700|GO:0009873
Mtr8g0075 200 SMART rav1_2 124 188 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0075 Mtr-Chr8 873649 874505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0075 38 195 AP2-EREBP Transcription Factor Family AT2G44840 53.165 5.40e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mtr8g0075 AP2 2.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0075 K09286 - gmx:100793366 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0075 8 873649 874505 Mtr8g0075 8 873649 874505 ECH