Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0074 ATGGATGCTTCAATATTAATGTCTTGTGATTTTAATCCTTCATTTGAATCTGTTGATCAAATTCAACACCACTTGTTTGATCTTGATAAACACCAAAACGATTTCCATTCTCTCATCATGAATACTAATTCCACCCACCATGCCTCAGATCCATCCTCGCACGATTCATTTACTAGTCCAACATTGGTTGTTAACAACACTGACAATGTTAATGATGCCGCATGTAAAAATGGATCATCATCGATGATCCATAAACCTCACATTCCAATACCAGAATGGAAGAGGTATAGAGGTGTGAGGCGAAGGCCATGGGGGAAATTTGCTGCAGAGATAAGGGATCCAAAGAAGAATGGAGCTAGAGTTTGGCTTGGAACGTACGAAACTGAAGAAGAAGCTGGTTTGGCTTATGATAGAGCCACTTTCAAGATCCGTGGTAGAAAAGCCAAGCTCAATTTTCCCCACCTTATCGGCTCTAAAGAGCCGACAAATGTGGTGGTAGCTTCGAAGAACAGCTTATCGGAGGCTAATTATGAGCCTTCGGGAGGGATAATAAAGAAGAAGAAGAAGAACTTAGTTGATGTATTGAATAGATTAGCCAATAATAGATGGAAAATTAAGTGCAGGGTTTGA 630 0.4016 MDASILMSCDFNPSFESVDQIQHHLFDLDKHQNDFHSLIMNTNSTHHASDPSSHDSFTSPTLVVNNTDNVNDAACKNGSSSMIHKPHIPIPEWKRYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETEEEAGLAYDRATFKIRGRKAKLNFPHLIGSKEPTNVVVASKNSLSEANYEPSGGIIKKKKKNLVDVLNRLANNRWKIKCRV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0074 209 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 43 203 - -
Mtr8g0074 209 Pfam AP2 domain 95 145 IPR001471 GO:0003700|GO:0006355
Mtr8g0074 209 ProSiteProfiles AP2/ERF domain profile. 95 153 IPR001471 GO:0003700|GO:0006355
Mtr8g0074 209 PANTHER DNA-BINDING DOMAIN 43 203 IPR044808 GO:0003700|GO:0009873
Mtr8g0074 209 Gene3D AP2/ERF domain 94 154 IPR036955 GO:0003700|GO:0006355
Mtr8g0074 209 SUPERFAMILY DNA-binding domain 95 154 IPR016177 GO:0003677
Mtr8g0074 209 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Mtr8g0074 209 PRINTS Ethylene responsive element binding protein signature 135 155 IPR001471 GO:0003700|GO:0006355
Mtr8g0074 209 SMART rav1_2 95 159 IPR001471 GO:0003700|GO:0006355
Mtr8g0074 209 CDD AP2 94 155 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0074 Mtr-Chr8 865044 865884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0074 87 158 AP2-EREBP Transcription Factor Family AT2G44840 79.167 2.08e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr8g0074 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0074 K09286 - gmx:100527194 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0074 8 865044 865884 Mtr8g0074 8 865044 865884 ECH
Mtr8g0074 8 865044 865884 Mtr7g2186 7 38171197 38172051 PCT