Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0073 ATGGTGAAACTCGAATCTACAACTCTTGAATCCTCCGACCTTGCTTTTCTCGAATCAATTCAACGCTACCTCCTCGAAGACCACCATGACTTCAACCCTCTCACGGCCATCACCACCGCATCTCATGGCATCGCTCCGGTGATCAACCGGACCTCTCCATCCTCCCCAACCAGCAGCCTTAGTAGTGACTCAAACTCAACGTCAAAAAGTAAAACACTTCATTGTGACGCCTCCCACTCCCTTCCGGCGTCGCGTGAAGCACACGCGCCACCTTGTTGGCAGAGATACAAAGGAGTGAGGCGGAGGCCTTGGGGAAAGTTTGCAGCTGAGATTAGAGATCCAAATAAAAACGGCGCGAGGGTGTGGCTTGGGACTTATGAGTCGGCTGAAGATGCTGCTTTGGCTTATGACCGAGCCGCTTTTAAGATGCGCGGCTCGAAGGCTAAGTTGAACTTCCCTCATTTGATTGACTCTGATGTCTCGGAGTCGATGGTAGTCACGGCTAAGCGGCGTGCAGTGGAGCTTTGTTCTTCGTCGAGGGTGGTTTTGGAGCCGAAAAGGAAAATGAGCCGAGTCAGTGGCTATGATTCTTTATTATGA 600 0.5133 MVKLESTTLESSDLAFLESIQRYLLEDHHDFNPLTAITTASHGIAPVINRTSPSSPTSSLSSDSNSTSKSKTLHCDASHSLPASREAHAPPCWQRYKGVRRRPWGKFAAEIRDPNKNGARVWLGTYESAEDAALAYDRAAFKMRGSKAKLNFPHLIDSDVSESMVVTAKRRAVELCSSSRVVLEPKRKMSRVSGYDSLL* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0073 199 SMART rav1_2 95 159 IPR001471 GO:0003700|GO:0006355
Mtr8g0073 199 ProSiteProfiles AP2/ERF domain profile. 95 153 IPR001471 GO:0003700|GO:0006355
Mtr8g0073 199 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Mtr8g0073 199 PRINTS Ethylene responsive element binding protein signature 135 155 IPR001471 GO:0003700|GO:0006355
Mtr8g0073 199 Gene3D AP2/ERF domain 94 154 IPR036955 GO:0003700|GO:0006355
Mtr8g0073 199 SUPERFAMILY DNA-binding domain 95 154 IPR016177 GO:0003677
Mtr8g0073 199 MobiDBLite consensus disorder prediction 47 77 - -
Mtr8g0073 199 MobiDBLite consensus disorder prediction 47 84 - -
Mtr8g0073 199 Pfam AP2 domain 95 145 IPR001471 GO:0003700|GO:0006355
Mtr8g0073 199 PANTHER DNA-BINDING DOMAIN 7 177 IPR044808 GO:0003700|GO:0009873
Mtr8g0073 199 CDD AP2 94 155 IPR001471 GO:0003700|GO:0006355
Mtr8g0073 199 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 7 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0073 Mtr-Chr8 859180 860103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0073 95 199 AP2-EREBP Transcription Factor Family AT2G44840 62.857 1.22e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr8g0073 AP2 1.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0073 K09286 - gmx:100527194 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0073 8 859180 860103 Mtr8g0073 8 859180 860103 ECH
Mtr8g0073 8 859180 860103 Mtr7g2187 7 38174313 38175265 PCT