Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0071 ATGGTGGAGGGGACCATGTCTCTTGATGCTGTTATAAAGGAAGCTGTTGATCTGGAGAACATTCCTATTGATGAGGTTTTTGATAATCTCAAATGCACAAAAGAAGGTTTAACCTGTGAGGAAGTACAGGAGAGGCTAGAGTTGTTTGGATACAATAAACTTGAAGAAAAGAAGGAAAGTAAAATACTAAAGTTTTTAGGGTTTATGTGGAATCCTTTGTCATGGGTTATGGAAGCTGCTGCTATCATGGCCATTGCTATGGCACATGGAGGCCGTAACATGGATGGAACGAAGAAACAAGGAGATTATCAAGATTTTGTTGGCATAATTATTTTGCTAATTATAAACTCTACCATAAGTTTCATAGAAGAAAATAATGCTGGTAATGCAGCAGCTGCCCTTATGGCAAGATTGGCTCCAAAAGCAAAGGTACTTCGTGACGGAAAATGGAGCGAGGAAGATGCTTCAGTGTTGGTCCCTGGAGACATAGTCAGTATCAAACTAGGTGACATTATTCCTGCAGATGCACGTCTCCTCGAAGGCGACCCTTTGAAGATTGATCAGTCTGCTCTTACTGGAGAGTCACTTCCTGTGACAAAACATCCTGGAGAAGGAATATATTCTGGTTCAACTTGCAAGCAAGGAGAAATTGAGGCCATAGTCATTGCAACTGGAGTTCACACATTTTTCGGGAAAGCAGCTCATCTTGTCGAAAACACAACACATGTTGGACATTTCCAGAAGGTTCTAACATCTATTGGGAATTTCTGCATCTGTTCGATTGCTATTGGAATGGTTATTGAAATCATCGTGATATACGGCGTCCACGGGAAGGGATACAGAAACGGTATTGATAACCTCCTTGTTCTGCTAATTGGTGGAATCCCTATTGCAATGCCAACTGTTCTTTCAGTTACAATGGCCATTGGTTCACATAAGTTGTCTCAGCAGGGTGCTATAACAAAGAGAATGACTGCTATTGAAGAAATGGCTGGAATGGATGTGTTATGTAGTGACAAAACAGGCACATTAACTCTTAACAAGCTTACAGTCGACAAGGATATGATTGAGGTTTTTGCCAAAGGAGTTGACAAGGATTTGGTTGTACTAATGGCTGCAAGAGCATCAAGGTTGGAGAACCAAGATGCAATTGACTGTGCAATTGTTTCAATGTTGGCAGACCCAAAGGAGGCACGAACTGGAATTAAAGAAGTTCATTTCCTTCCATTCAATCCAACTGATAAAAGAACTGCACTTACATACATTGATGCTGCCGGTAATATGCACAGGGTTAGCAAAGGTGCACCAGAGCAGATTCTCAATCTTGCACGTAATAAAGCAGAAATTGCACAAAAGGTTCATTCAATGATTGACAAGTTTGCAGAACGTGGACTTCGTTCTCTTGGGGTTGCTAGACAGGAAGTACCTGAGGGAAGTAAGGATAGTCCAGGAGGACCATGGGAGTTTGTTGCCCTTCTCCCTCTTTTTGACCCTCCTCGCCATGATAGCGCAGAAACAATCAGAAGAGCTCTTGATCTTGGCGTTAGTGTCAAAATGATCACCGGTGATCAACTTGCAATAGGAAAGGAAACGGGAAGGCGTCTAGGAATGGGGACTAACATGTATCCTTCTTCATCACTGCTTGGTGATAATAAAGATCAATTAGGTGCTGTTTCCATTGATGATCTCATTGAGAATGCTGACGGTTTTGCTGGTGTCTTTCCTGAGCACAAGTATGAGATTGTGAAGAGGTTACAGGCTAGAAAGCACATTTGTGGCATGACTGGTGATGGAGTGAATGATGCACCTGCCTTAAAGATAGCTGACATAGGTATTGCAGTAGCAGATTCTACAGACGCTGCAAGAAGCGCTTCTGACATAGTGCTGACAGAACCTGGTTTGAGTGTCATCATAAGTGCAGTTTTAACCAGTCGAGCAATTTTCCAGAGGATGAAAAACTACACAATATATGCTGTATCTATCACTATTCGTATTGTGTTGGGCTTCATGTTACTTAACAGCTTTTGGAGTTTTGACTTTCCACCCTTTATGGTTCTTATCATTGCCATTCTCAATGATGGTACCATTATGACAATATCCAAAGATAGGGTTAAGCCTTCACCACTTCCTGATAGTTGGAAGCTTAGTGAAATTTTTGCTACTGGGGTTATTCTTGGTACCTATCTGGCTATAATGACAGTCATCTTCTTCTGGATAGTTATGGAAACAAACTTCTTTCCTGACAATTTTGGTGTGCACCGCTTCCGCCCTGATCTAAAGGCTCCTGTCACTAGTGAAATGACAGAGAAGTTGGCTTCTGCTGTCTATCTTCAAGTCAGTACAATTAGTCAAGCCTTAATCTTTGTGACACGGTCTAGGGGTTGGTCTTATACAGAAAGACCTGGTCTTTTGCTTGTTTTTGCCTTTGCTATAGCTCAGCTGGTTGCAACTGTTATATCAGCACAAGCCACTTGGAAAATTGCTGGAATCAGAGGCATAGGTTGGGGCTGGGCAGGAGTCATTTGGTTGTTCAATATTGTAACTTATGTTTTTCTTGATCCTTTAAAGTTTGTTGTTGCTTATCAACAAAGCGGAAGGGCGTGGAATCTGGTGGTAAACCAAAGGACTGCATTCACCAACAAAAATGACTTTGGAAAAGAAGCTCGTGAGGCTGCATGGGCTGCTGAACAGAGAACCTTGCATGGTCTTCGCTCTGCTGAGATAAAAGGGTTTGCAGAGAAGCACAACCATAGAGAAATTAATACAATGGCAGACGAGGCTAAGAGACGAGCAGAGTTAGCAAGGTTGAGAGAGCTTCACACTCTGAAAGGAAGAGTGGAATCATTTGCCAAGCTACGGGGTTTGGACATTGATACCATGAATGGACACTACACTGTCTAA 2901 0.4216 MVEGTMSLDAVIKEAVDLENIPIDEVFDNLKCTKEGLTCEEVQERLELFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIAMAHGGRNMDGTKKQGDYQDFVGIIILLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGEGIYSGSTCKQGEIEAIVIATGVHTFFGKAAHLVENTTHVGHFQKVLTSIGNFCICSIAIGMVIEIIVIYGVHGKGYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKDMIEVFAKGVDKDLVVLMAARASRLENQDAIDCAIVSMLADPKEARTGIKEVHFLPFNPTDKRTALTYIDAAGNMHRVSKGAPEQILNLARNKAEIAQKVHSMIDKFAERGLRSLGVARQEVPEGSKDSPGGPWEFVALLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGDNKDQLGAVSIDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLNSFWSFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVILGTYLAIMTVIFFWIVMETNFFPDNFGVHRFRPDLKAPVTSEMTEKLASAVYLQVSTISQALIFVTRSRGWSYTERPGLLLVFAFAIAQLVATVISAQATWKIAGIRGIGWGWAGVIWLFNIVTYVFLDPLKFVVAYQQSGRAWNLVVNQRTAFTNKNDFGKEAREAAWAAEQRTLHGLRSAEIKGFAEKHNHREINTMADEAKRRAELARLRELHTLKGRVESFAKLRGLDIDTMNGHYTV* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0071 966 SUPERFAMILY Calcium ATPase, transduction domain A 140 237 IPR008250 -
Mtr8g0071 966 SFLD p-type atpase 319 646 IPR044492 -
Mtr8g0071 966 ProSitePatterns E1-E2 ATPases phosphorylation site. 339 345 IPR018303 -
Mtr8g0071 966 Gene3D - 334 632 IPR023214 -
Mtr8g0071 966 Gene3D - 140 224 - -
Mtr8g0071 966 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Mtr8g0071 966 Pfam E1-E2 ATPase 138 316 - -
Mtr8g0071 966 PRINTS H+-transporting ATPase (proton pump) signature 453 471 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g0071 966 PRINTS H+-transporting ATPase (proton pump) signature 567 583 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g0071 966 PRINTS H+-transporting ATPase (proton pump) signature 595 611 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g0071 966 PRINTS H+-transporting ATPase (proton pump) signature 626 651 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g0071 966 PRINTS H+-transporting ATPase (proton pump) signature 776 797 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g0071 966 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 109 353 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g0071 966 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 570 672 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g0071 966 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 860 IPR023298 -
Mtr8g0071 966 Gene3D - 102 831 - -
Mtr8g0071 966 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Mtr8g0071 966 Pfam haloacid dehalogenase-like hydrolase 333 609 - -
Mtr8g0071 966 SFLD Haloacid Dehalogenase 319 646 - -
Mtr8g0071 966 PANTHER PLASMA MEMBRANE ATPASE 5 946 - -
Mtr8g0071 966 Gene3D - 349 496 IPR023299 GO:0000166
Mtr8g0071 966 SUPERFAMILY HAD-like 333 642 IPR036412 -
Mtr8g0071 966 Gene3D - 915 966 - -
Mtr8g0071 966 PANTHER CALCIUM-TRANSPORTING ATPASE 5 946 - -
Mtr8g0071 966 CDD P-type_ATPase_H 36 857 IPR006534 GO:0008553|GO:0016021|GO:0120029
Mtr8g0071 966 PRINTS P-type cation-transporting ATPase superfamily signature 187 201 - -
Mtr8g0071 966 PRINTS P-type cation-transporting ATPase superfamily signature 337 351 - -
Mtr8g0071 966 PRINTS P-type cation-transporting ATPase superfamily signature 491 502 - -
Mtr8g0071 966 PRINTS P-type cation-transporting ATPase superfamily signature 513 523 - -
Mtr8g0071 966 PRINTS P-type cation-transporting ATPase superfamily signature 595 614 - -
Mtr8g0071 966 PRINTS P-type cation-transporting ATPase superfamily signature 618 630 - -
Mtr8g0071 966 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 36 821 IPR006534 GO:0008553|GO:0016021|GO:0120029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0071 Mtr-Chr8 829036 836110 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0071 8 966 Primary Pumps ATPases AT5G62670 78.750 0.0 1514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0071 K01535 - gmx:100794938 1623.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0071 8 829036 836110 Mtr8g0071 8 829036 836110 ECH