Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0059 ATGAAAGTGATGTTGTTGAACAACCTTAAACGACATTTCTGTTCCAACATCACAACAACCTTAAACTCCTCAAAAAAGGAAATTCCTTGTCGCTACAAGAAACTTGTAGTGTCACAAGCTCAAAAAGCACTCACTGAATATCTCCACTCCACAAGATCCATCCCTTATGCTTTTGCGGATCAGATTTCCAAAAACTCATTTCATTCTCTCTCTAATCTCATTTCAAAGTTGGGTTCCTTTTCACCAAAAAAATTGGATTCTTTCACCAAAAAAATTGAAAAGTTCTTAAGGTACAACCCCATCAATGAGTTTGAGTTTTTCTTTGAAAGCATCGGAATTCATCATACACATATTTCTAGTTTGTTGCCGAATGATAAGTTCTTTTTTTGCGATGATGGATCACTTCTTGATTCTGCTTGTGTGCTTTGTGAATTTGGGTTTCCTTGGGATAAGCTTGGTGTGATTTATACGGAGAGTGGTTTTATGTTTAGGAAAAGTGGTTCTGAGATAAAGGGTAGGCTTTGTTTGTTGAAAAGATATGGTTTTTGTAATGTGCAAATTGTTGCGATTTGTTTGACTTTTCCTTTTGTTTTTGGTGTGGAGGAAAGGGAATTTGTCGATGATGAGGTTGATAGGTTGCTTTCTGATTTGAGGTTGGTGTTTTTGGATTTTGATTTGGTAGGGTGTGTTGAAGGGAATGTGGATGTTTGGTATGATGTTTGTAGGAAAATTAAAGTGTTTTATGATTTGAGTGATGGTAAGGGAAAGATAGGTGAACTCATTGGAAGGAATAAACATTTGATTCTTGAGTATGGAGAAGAGGAGCTGATTGAAAAGGTTGAGTTTTTTTGTAGATTCAGTGTCGAGAAGGAGGAAGTAGCTCGGTTGATTCTACAAGGTTTGGAGTTGTTGAGTCTCAATTTGGAAGCGACGATTAACGTGTTGAAGCTGTTGAAACACATTGGAGTGGATTCTACAGGTCTTGGTGATGTGAAGAAGAACTATGCTTATGCGTTGGGAACAATAAAAATGGCGAATCTTCCCAATGTGATGAGGGCTATGGGTTTACGTGAATGGTTTTTCGATAAAATCAAGGATGGGAATCATAAGCTTTTAGTGGATTTTATCACAAGCTATCCCAATGAAGAGCCTGATAAAGGTTATCAAAGTGGTTTTAAGGCAATTCATGATGCAAGGTTACCGTCTCACAATATGAGTAAATTAAATTTCATGCATACTATTGGCTTTGGTGAAAATGCTATGACCATGGATATCTTAACTCACATGCATGGAACAAGTGAAGAGTTACATAAAAGATTTGATTGCCTTCTACATTTAGGGATTGAATTCTCAAAACTGTGTAAGATAATCACAAAGCTACCAAAGATTCTAAGCCAAAACCCTGAAACTCTAGAGAAAAAGATTAATTTCCTATGTCAGGATATGGGACACTCCTTAGAGCTTTTGGACACTTTTCCGGCGTTTATATCTTTTGACTTAGAGAACCGAATTAAGCCAAGGTTCAGATTCCATATGTGGGCTTTAGAAAAGGGATTGTATTCAAAAAACTATTCCATTGCAAGCTTGGTTGCGACTAGTGACAAGGGTTTTGTTGGCCGTGTTTTTAAAATTCACCCAGCTGCTCCAAAACATTGGTTTGAGCAATTCTATCCCAATAAATTTCGAGCTTCATGA 1695 0.3699 MKVMLLNNLKRHFCSNITTTLNSSKKEIPCRYKKLVVSQAQKALTEYLHSTRSIPYAFADQISKNSFHSLSNLISKLGSFSPKKLDSFTKKIEKFLRYNPINEFEFFFESIGIHHTHISSLLPNDKFFFCDDGSLLDSACVLCEFGFPWDKLGVIYTESGFMFRKSGSEIKGRLCLLKRYGFCNVQIVAICLTFPFVFGVEEREFVDDEVDRLLSDLRLVFLDFDLVGCVEGNVDVWYDVCRKIKVFYDLSDGKGKIGELIGRNKHLILEYGEEELIEKVEFFCRFSVEKEEVARLILQGLELLSLNLEATINVLKLLKHIGVDSTGLGDVKKNYAYALGTIKMANLPNVMRAMGLREWFFDKIKDGNHKLLVDFITSYPNEEPDKGYQSGFKAIHDARLPSHNMSKLNFMHTIGFGENAMTMDILTHMHGTSEELHKRFDCLLHLGIEFSKLCKIITKLPKILSQNPETLEKKINFLCQDMGHSLELLDTFPAFISFDLENRIKPRFRFHMWALEKGLYSKNYSIASLVATSDKGFVGRVFKIHPAAPKHWFEQFYPNKFRAS* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0059 564 PANTHER CGI-12 PROTEIN-RELATED 21 557 IPR003690 GO:0003690|GO:0006355
Mtr8g0059 564 Pfam mTERF 433 537 IPR003690 GO:0003690|GO:0006355
Mtr8g0059 564 Gene3D Transcription termination factor 3, mitochondrial 67 223 IPR038538 -
Mtr8g0059 564 Gene3D Transcription termination factor 3, mitochondrial 234 365 IPR038538 -
Mtr8g0059 564 Gene3D Transcription termination factor 3, mitochondrial 368 556 IPR038538 -
Mtr8g0059 564 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 21 557 - -
Mtr8g0059 564 SMART mt_12 486 518 IPR003690 GO:0003690|GO:0006355
Mtr8g0059 564 SMART mt_12 294 324 IPR003690 GO:0003690|GO:0006355
Mtr8g0059 564 SMART mt_12 454 485 IPR003690 GO:0003690|GO:0006355
Mtr8g0059 564 SMART mt_12 259 289 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0059 Mtr-Chr8 729206 733141 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr8g0059 mTERF 1.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0059 - - gmx:100812245 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0059 8 729206 733141 Mtr8g0059 8 729206 733141 ECH