Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0036 ATGGAGAAACATATCAACATGGAAAGTGATGCTGATGACACTTCTAGCACACCCTCTTTCTCCTCCTCCACTTCATCAAATTCAGATACAAAGGAGGAGAGTAAGAAAAGGCAGAGAAGTACTGAAGTTGAAAATAATAGCACACATCCAACTTATAGAGGAGTAAGGAAGAGAAATTGGGGGAAATTTGTGTGTGAGATTCGTGAGCCAAAGAAAAAATCAAGAATATGGCTTGGAACATACCCTACAGCTGAAATGGCAGCTAGAGCACATGATGTAGCTGCTTTAGCTATAAAGGGTCATTCAGCATACCTTAATTTCCCTGAATTGGTACAACAACTTCCAAAGCCAATAAGTACTTCTACAAAAGACATTCAAGCTGCTGCTGCAAAAGCTGCAAACACTGTATTTGTAGCTGAACCAATACAAGAAGAACATTTCTCATCTTCAAGTTCAACATTTACCAATAATGATGATGCTACATTGTTTGATTTGCCAGATCTTTTTCCTGATGATGGAAACAATGGACTTTGTTCTTATTCTTCAAAAAATTCTTCTTGGTATTTATGTGCAGTTGATAGTGGATTTAGGCTTGAGGAACCATCTTTTTGGGAGAAATACTAG 624 0.3766 MEKHINMESDADDTSSTPSFSSSTSSNSDTKEESKKRQRSTEVENNSTHPTYRGVRKRNWGKFVCEIREPKKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELVQQLPKPISTSTKDIQAAAAKAANTVFVAEPIQEEHFSSSSSTFTNNDDATLFDLPDLFPDDGNNGLCSYSSKNSSWYLCAVDSGFRLEEPSFWEKY* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0036 207 MobiDBLite consensus disorder prediction 29 43 - -
Mtr8g0036 207 SUPERFAMILY DNA-binding domain 51 109 IPR016177 GO:0003677
Mtr8g0036 207 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Mtr8g0036 207 CDD AP2 52 110 IPR001471 GO:0003700|GO:0006355
Mtr8g0036 207 MobiDBLite consensus disorder prediction 1 53 - -
Mtr8g0036 207 PANTHER ETHYLENE RESPONSE FACTOR 37 207 - -
Mtr8g0036 207 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Mtr8g0036 207 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Mtr8g0036 207 Pfam AP2 domain 50 101 IPR001471 GO:0003700|GO:0006355
Mtr8g0036 207 Gene3D AP2/ERF domain 51 110 IPR036955 GO:0003700|GO:0006355
Mtr8g0036 207 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 37 207 - -
Mtr8g0036 207 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
Mtr8g0036 207 MobiDBLite consensus disorder prediction 11 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0036 Mtr-Chr8 464868 465673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0036 49 203 AP2-EREBP Transcription Factor Family AT2G44940 51.256 3.82e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr8g0036 AP2 3.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0036 - - mtr:MTR_8g006410 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0036 8 464868 465673 Mtr8g0036 8 464868 465673 ECH