LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g0029	ATGTTGGACTATGAATGGGGTAACCCATCAAACATCATGCTTACCGGAAATGAAGACAACTCCGGTGCAGCAGCCACCGATCAAGCCCACCGTCAAATCTTCGACCACTATGCTTCTCAAGCTATGTTATCCGACAACTACCTTAACGGACCTGGTGGTGGACCCACCATCGACATAAACAGTGGTGATTTTACTCATCACCACAACCAGTTTAGCCCACACAACCAGCAGCACCATAATATCCATCAGTCCTTCTTCGACCCACGGGCTTTTCATGGAGGGTCATCAACTGCTTCTTCTTACCCTCCACCTCAACCACAACCTCCTCCTTCCATGCTCTCCCTTGACCCTCTTCCTGGTCATGGACATAGCCCTGGATTCCTCCTCGTACCAAAATCCGAGGATGTTAACAGACCCATTGACTTCGTGGGCTCTAGACTTGGACTCAACCTTGGTGGCCGCACTTACTTCTCTTCCGAAGATGACTTCGTGACCCGCCTTTACCGTCGGTCTAGACCACCTGAACCGGGTTCCACAGGTTCTTCGAACTCACCTAGGTGTCAAGCCGAAGGTTGCAATGCTGATCTATCTCAGGCTAAGCATTACCACCGCCGCCACAAAGTTTGTGAGTTTCACTCGAAGGCAGCCACCGTCGTTGCAGCTGGGTTGACTCAGCGGTTCTGCCAGCAATGCAGCAGGTTCCATCTTCTATCTGAGTTTGATAATGGAAAACGTAGCTGCAGGAAGAGATTGGCTGATCATAATCGTCGTAGGAGAAAAACTCAGCACCCTAATACTCAAGATATTCACAAATCTCACAATACTTTGGATAGTTCTGCCACAAGATCCCCTCCGGAGTCTGGAACTCAATCCACATCTTCTGTGACTGTGGCCGTATCTCCACCGGATTATTTTCGACAAAGGTCGTACCAAACCCCAAGCCCTTCAACAACTTCAAGCTCAATGTTTTTCTCCACCGGGTAG	984	0.4949	MLDYEWGNPSNIMLTGNEDNSGAAATDQAHRQIFDHYASQAMLSDNYLNGPGGGPTIDINSGDFTHHHNQFSPHNQQHHNIHQSFFDPRAFHGGSSTASSYPPPQPQPPPSMLSLDPLPGHGHSPGFLLVPKSEDVNRPIDFVGSRLGLNLGGRTYFSSEDDFVTRLYRRSRPPEPGSTGSSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVVAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQHPNTQDIHKSHNTLDSSATRSPPESGTQSTSSVTVAVSPPDYFRQRSYQTPSPSTTSSSMFFSTG*	328

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mtr8g0029	327	MobiDBLite	consensus disorder prediction	101	115	-	-
Mtr8g0029	327	MobiDBLite	consensus disorder prediction	250	327	-	-
Mtr8g0029	327	Pfam	SBP domain	187	260	IPR004333	GO:0003677
Mtr8g0029	327	ProSiteProfiles	Zinc finger SBP-type profile.	184	261	IPR004333	GO:0003677
Mtr8g0029	327	PANTHER	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8	100	311	-	-
Mtr8g0029	327	SUPERFAMILY	SBT domain	185	264	IPR036893	GO:0003677\|GO:0005634
Mtr8g0029	327	MobiDBLite	consensus disorder prediction	86	130	-	-
Mtr8g0029	327	MobiDBLite	consensus disorder prediction	250	264	-	-
Mtr8g0029	327	PANTHER	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	100	311	IPR044817	GO:0003677
Mtr8g0029	327	Gene3D	-	177	248	IPR036893	GO:0003677\|GO:0005634

Showing 1 to 10 of 11 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g0029	Mtr-Chr8	378996	381404	Dispersed/Transposed

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr8g0029	1	234	SBP-box Gene Family	AT1G02065	45.492	2.77e-60	191

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	SBP	Mtr8g0029		SBP	4.5e-31	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g0029	-		-	gmx:100778566	441.039

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr8g0029	8	378996	381404	Mtr8g0029	8	378996	381404	ECH

Showing 1 to 1 of 1 entries