Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0017 ATGGATGATGAGGCAATGAAGGAGCTTGTGCGAGGGCATGAGTTAGCTAAGCAGCTTGGACAACATCTTAGTAATGATGAATTATTTGCACAACATCTTGTCAACAATGTTATCAATTCATTTACCAACACCCTCTTCCTTTTGAACAATAAACATCATCAAAGGGAACAAAACTTTTCCTTAACCATTAAATCTGAAGAGGACTCTCAAGATAGTTGCAAGACTAATTCCACCCCTGGTGCTAGAGGATCTCACAAAAGAAGAAAAACTAGAGAAACGTGTGAGGAAGTGTCAGAAAGACCAACAGATGATGGGCATGAATGGAGAAAGTATGGTCAAAAAACAATCCTTAATTCCAAATACTCAAGGGACTACTACAGGTGTACTCACAAGATAGATCAAAGATGCAAAGCAACCAAACAGGTGCAGAGAATTCAAGAGAAGCCTCCCTTGTATAAGACCACCTATTACGACCACCACACTTGTAACAAAGACAATATCATCATATTTGAACCCACTTCTCCTCATGATCACATATTGCTTAGCTTTAACAACACATTCCCAACTCCAACCCAACAAGATTGTCCCTTTTTATCATCGTCGACATCATCATCATCTTTTAATTCCTCACATTCAGTCTCAGTGGATGAATACCTGCTCTCTCCTCAACCAATATTAGATAACTCTATTTCTACAAGGCATGTTCTTAGTACTATATCATCATCAACTACACTAGAATCTGATGATCACAAGGATATGATGATAATGTATGGTCTCTTGTATGATTCTGTTGAACTTGATACTGATTTCCTTCACCCTTTTCATGGGTTTCAATTATAG 840 0.3798 MDDEAMKELVRGHELAKQLGQHLSNDELFAQHLVNNVINSFTNTLFLLNNKHHQREQNFSLTIKSEEDSQDSCKTNSTPGARGSHKRRKTRETCEEVSERPTDDGHEWRKYGQKTILNSKYSRDYYRCTHKIDQRCKATKQVQRIQEKPPLYKTTYYDHHTCNKDNIIIFEPTSPHDHILLSFNNTFPTPTQQDCPFLSSSTSSSSFNSSHSVSVDEYLLSPQPILDNSISTRHVLSTISSSTTLESDDHKDMMIMYGLLYDSVELDTDFLHPFHGFQL* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0017 279 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 270 IPR044810 GO:0003700
Mtr8g0017 279 MobiDBLite consensus disorder prediction 88 105 - -
Mtr8g0017 279 MobiDBLite consensus disorder prediction 62 105 - -
Mtr8g0017 279 Pfam WRKY DNA -binding domain 103 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g0017 279 ProSiteProfiles WRKY domain profile. 97 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g0017 279 SMART WRKY_cls 102 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g0017 279 Gene3D WRKY domain 88 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g0017 279 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 270 - -
Mtr8g0017 279 SUPERFAMILY WRKY DNA-binding domain 99 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0017 Mtr-Chr8 254321 255698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0017 4 163 WRKY Transcription Factor Family AT3G56400 40.698 2.19e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr8g0017 WRKY 2.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0017 - - lja:Lj3g3v0459900.1 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1809 7 34131192 34133840 Mtr8g0017 8 254321 255698 PCT