Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0016 ATGAATGAGCATCATATCATATCATATCATAACAATATGGCTTCTTTGCTCCATCCAACTCCAACTGTTACCACTATACTTAAGCATCGAACATCAACAATCTGTTTCTTCTGTCCCTTAAAACCTACAAATGTTTCTTTCTTAACTAACACAAACCGTGTCAATACCAACACTACAAAGTGTAATGCATTTTTTGATAATAATGTCACCAGTGGTTTGTTGGAGGTTGGTGGGGACCACATTCCTTCTTTCCTTCGATCAGGACTACTTCAGTTTCAAGAATTATCAGACATGCAGAGATGGGAGTTTCTTCTTTTTGGTGGACTCATATGGATATACTTAACTGCAAGACCAGGTGTTCTTATTGGTGCCATTGATGCTTACCTTTTTGCTCCTCTTCAACTTGGTTTTGACAATCTATCTGGAAGGAGAAACTTGAAGACTGGTGATTTTCTTGTTGGAGATAAAATCGGTGAAGGGTCATTTGGTGTTGTTTATTCTGGTGTTTTGATCTCAAAGAATGTGGTGGATGTTGAGGAGGACAAGAGAGGAAGATCCAAGGCAACAAGGTTGGAACCCAAATCTAAGGATAAAGTTATTCTAAAAAAGGTTAAGATTGGAATTCAAGGGGCTGAAGAATTTGGTGAATTTGAGGAATGGTTCAATTACCGGCTATCTAGAGCAGCACCTGAAACATGTGCTGACTTCCTTGGAAGTTTTGTGGCTGATAAAACAAACTCACAGTTCACAAAAGGTGGAAAATGGCTTGTTTGGAAATTTGAGGGAGATCGTACTCTTGCAGATTATATGAAAGAGCGCAACTTCCCTTCAAACTTAGAATCTGTCATGTTTGGACGTGTGTTGCAAGGCGTAGATTCTTCTAGACGAAATGCATTGATCATCAAGCAAATCATGCGCCAGATAATTACTTCTCTTAAGAAAATTCATGATACAGGCATTGTTCATAGAGATATAAAGCCAGCCAACTTAGTGGTCACCAAACAGGGGCAGATTAAACTCATTGATTTTGGTGCTGCAACAGACCTTCGGATCGGAAAGAATTATGTTCCCGACCGCACCCTTTTGGATCCTGACTATTGCCCCCCAGAACTCTATGTACTCCCAGAAGAAACACCAAGTCCCCCACCGGCGCCAATTGCTGCGTTCTTTTCACCAATCCTATGGCAGTTAAACAGCCCTGATCTGTTTGATACTTATTCGGCTGGGATTGTACTCCTTCAAATGGCAATACCAACCTTAAGGTCTCCTGCTGCTTTGAAGAATTTTAATTTGGAAATAAAAACCTGTGGATATGATTTGAAAAAATGGAGGGAATATACTCGCCTCAGGCCCAACCTCCAAATTCTTGATAGTGAATCTGGTAGAGGTTGGGACTTGGCAACAAAGCTTATATCTGAAAGAGGTCCCGTAAGAAGAGGACGTTTATCTGCTGCTTCAGCTTTGAGACATCCTTATTTTCTTCTAGGAGGTGATCAGGCAGCTGCAGTTCTTTCAAAATTAAGCTTAAGTAGAAAGTAA 1539 0.4042 MNEHHIISYHNNMASLLHPTPTVTTILKHRTSTICFFCPLKPTNVSFLTNTNRVNTNTTKCNAFFDNNVTSGLLEVGGDHIPSFLRSGLLQFQELSDMQRWEFLLFGGLIWIYLTARPGVLIGAIDAYLFAPLQLGFDNLSGRRNLKTGDFLVGDKIGEGSFGVVYSGVLISKNVVDVEEDKRGRSKATRLEPKSKDKVILKKVKIGIQGAEEFGEFEEWFNYRLSRAAPETCADFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKERNFPSNLESVMFGRVLQGVDSSRRNALIIKQIMRQIITSLKKIHDTGIVHRDIKPANLVVTKQGQIKLIDFGAATDLRIGKNYVPDRTLLDPDYCPPELYVLPEETPSPPPAPIAAFFSPILWQLNSPDLFDTYSAGIVLLQMAIPTLRSPAALKNFNLEIKTCGYDLKKWREYTRLRPNLQILDSESGRGWDLATKLISERGPVRRGRLSAASALRHPYFLLGGDQAAAVLSKLSLSRK* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0016 512 SMART serkin_6 151 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0016 512 SUPERFAMILY Protein kinase-like (PK-like) 146 494 IPR011009 -
Mtr8g0016 512 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 8 510 IPR044803 GO:0004674|GO:0009579
Mtr8g0016 512 Gene3D Transferase(Phosphotransferase) domain 1 291 495 - -
Mtr8g0016 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Mtr8g0016 512 ProSiteProfiles Protein kinase domain profile. 151 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0016 512 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 8 510 - -
Mtr8g0016 512 Pfam Protein kinase domain 300 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0016 512 Gene3D Phosphorylase Kinase; domain 1 139 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0016 Mtr-Chr8 243596 246387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0016 151 349 MAP Kinase Kinase Kinase AT3G13530 25.743 5.85e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Mtr8g0016 Pkinase 4.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0016 - - mtr:MTR_8g005720 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0016 8 243596 246387 Mtr7g1815 7 34174610 34178320 PCT