LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g0013	ATGCTTAATATTGTTTTATTATTGTCTGTGTCTTTAGTTTTGACATCAATAATTTCTTCAGCATATGGTGCCATTGAAAGTGGTGATGAAAGCAATAAACTTCACATTGTGTATATGGGTTCACTTCGTAAGGGAGCATCATATTCTCCAACCTCTCACCATCTAAACTTGCTGCAACAAGTTATTGATGGTAGTGATATAGAAAATCATTTAGTTCGAAGTTACAAGAGAAGTTTCAATGGTTTTGCCGCAGTACTCAATGATCAACAAAGAGAAAAGCTTTCTAACATGCGAGGTGTGGTATCAGTTTTTCCAAGCCGAGAGTATCATCTTCAAACCACAAGGTCATGGGACTTCCTTGGATTACCTCAATCAATCAAAAGATCTCAAACCGCTGAGAGTGATTTGGTGATTGGAGTCATAGATAGCGGAATTTGGCCAGAGTCTGAAAGTTTCAATGATAAAGGTCTTGGTTCTATTTCAAAAAAGTGGAGGGGGGTTTGTGCAGGCGGTGTTAACTTCACTTGCAATAATAAGGTCATTGGAGCACGCTTTTACGGCATCGGAGATGATAGTGCAAGAGACGCAAATGGTCATGGAACCCACACATCATCGACAGCCGGCGGAAGTGAGGTGAAGGGTGTAAGCTTTTATGGTCTTGCAAAAGGCACTGCAAGAGGTGGAGCACCATCTTCAAGAATTGCTGCATACAAAACCTGCAACAATCTAGGTATGTGCTCTGATGATGCTATTTTATCTGCATTCGATGATGCCATTGCTGATGGAGTTGATGTCATCACTGTCTCTATGGGTAAACCACAAGCTTATGAGTTTGTGGATGATGCTTTTGCCATTGGTTCTTTTCATGCCATGGAGAATGGAATACTGACAGTGCAGGCTGCAGGAAATGATGGTCCAAATCCAAGTACTGTGAAAAGTATAGCACCTTGGGTATTTAGTGTTGCTGCCACTACCATAGATCGTCAATTCATTGATAAGCTAATTCTTGGAAATGGAAAGACTGTTATTGGTAGTTCAATTAACATTGTCCCATCAAATGGTACCAAATTTCCAATAGCTGTGCATAATGCTCAAGCTTGTCCAGCTGGAGCAAATGCATCCCCTGAAAAGTGTGATTGCATAGACAAAAATATGGTGAAGGGTAAGTTTGTTTTGTGTGGAGTATCAGGGCGTGAAGGATTGGCTTATGCAAATGGAGCAATTGGTTCAATCAATAATGTTACAGAAACTGAATTTGATATTCCTTCAATCACTCAAAGGCCTTCACTTAACTTGGAACCAAAAGACTTTGTTCATGTCCAGTCCTACACAAATTCCACTAAATACCCTGTAGCTGAACTTTTAAAGACTGAGATTTTCCATGACACCAATGCTCCTAAAATTATTTATTTCTCTTCTCGTGGCCCAAATCCTATGGTTCCTGAAATTATGAAACCAGATATAAGTGCTCCAGGAGTTAATATCTTGGCTGCATATCCACCTATGGGGACACCAAAATACAACCTATTATCTGGAACCTCGATGTCATGTCCCCACGTTGCTGGAGTTGTTGCATATGTGAGATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATCATGACCACTGCGGAACCAGTGAAAGGTACTTATGATGATTTGGTGGGTGAGTTTGCTTATGGATCTGGGAATGTCAACCCACAACAAGCTGTTCATCCTGGACTTGTTTATGACATCAGCAAAGAAGATTATGTACAAATGCTTTGCAATTATGGTTATGATGCCAAAAAAATCAAACAGATTAGTGGAGATAATTTAAGTTGCCACGTAACATCCAAAAGGTCCTTGGTGAAAGATATTAACTATCCATCAATGGTGATTCCTGTTAGGTCTTATCACAAGCGTTTCAATGTCAATATTCATAGAACAGTTACGAATGTTGGCTTTTTCAACTCAACCTACAAGGCAACTCTTATCCATCATGATCCAAAAATCAAAATTAGTGTGAAACCAAAACTTCTTACATTCAGATCATTACATGAGAAAAAATCTTTTGCTGTCACTGTCATTGGAGGAGCAAAATTAAATCAAACAATGTTTTCCTCATCGCTTATTTGGTCTGACGGTATCCACAATGTTAAGAGTCCAATTATTGTACAACTACTTCCTCTATATAGTTGA	2190	0.3932	MLNIVLLLSVSLVLTSIISSAYGAIESGDESNKLHIVYMGSLRKGASYSPTSHHLNLLQQVIDGSDIENHLVRSYKRSFNGFAAVLNDQQREKLSNMRGVVSVFPSREYHLQTTRSWDFLGLPQSIKRSQTAESDLVIGVIDSGIWPESESFNDKGLGSISKKWRGVCAGGVNFTCNNKVIGARFYGIGDDSARDANGHGTHTSSTAGGSEVKGVSFYGLAKGTARGGAPSSRIAAYKTCNNLGMCSDDAILSAFDDAIADGVDVITVSMGKPQAYEFVDDAFAIGSFHAMENGILTVQAAGNDGPNPSTVKSIAPWVFSVAATTIDRQFIDKLILGNGKTVIGSSINIVPSNGTKFPIAVHNAQACPAGANASPEKCDCIDKNMVKGKFVLCGVSGREGLAYANGAIGSINNVTETEFDIPSITQRPSLNLEPKDFVHVQSYTNSTKYPVAELLKTEIFHDTNAPKIIYFSSRGPNPMVPEIMKPDISAPGVNILAAYPPMGTPKYNLLSGTSMSCPHVAGVVAYVRSFHPDWSPAAIKSAIMTTAEPVKGTYDDLVGEFAYGSGNVNPQQAVHPGLVYDISKEDYVQMLCNYGYDAKKIKQISGDNLSCHVTSKRSLVKDINYPSMVIPVRSYHKRFNVNIHRTVTNVGFFNSTYKATLIHHDPKIKISVKPKLLTFRSLHEKKSFAVTVIGGAKLNQTMFSSSLIWSDGIHNVKSPIIVQLLPLYS*	730

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g0013	729	Gene3D	-	327	461	-	-
	Mtr8g0013	729	Pfam	Subtilase family	134	564	IPR000209	GO:0006508\|GO:0008236
	Mtr8g0013	729	ProSitePatterns	Serine proteases, subtilase family, serine active site.	512	522	IPR023828	-
	Mtr8g0013	729	Pfam	Fibronectin type-III domain	622	722	IPR041469	-
	Mtr8g0013	729	PANTHER	SUBTILISIN-LIKE PROTEASE SBT4.3	34	724	-	-
	Mtr8g0013	729	ProSiteProfiles	Serine proteases, subtilase domain profile.	108	574	-	-
	Mtr8g0013	729	Pfam	Peptidase inhibitor I9	35	111	IPR010259	-
	Mtr8g0013	729	PRINTS	Subtilisin serine protease family (S8) signature	133	152	IPR015500	-
	Mtr8g0013	729	PRINTS	Subtilisin serine protease family (S8) signature	195	208	IPR015500	-
	Mtr8g0013	729	PRINTS	Subtilisin serine protease family (S8) signature	511	527	IPR015500	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g0013	Mtr-Chr8	217817	220342	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr8g0013	30	722	Subtilisin-like Serine Gene Family	AT5G59120	50.354	0.0	698

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g0013	-		-	mtr:MTR_1g006990	1043.88

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