Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr8g0013 | ATGCTTAATATTGTTTTATTATTGTCTGTGTCTTTAGTTTTGACATCAATAATTTCTTCAGCATATGGTGCCATTGAAAGTGGTGATGAAAGCAATAAACTTCACATTGTGTATATGGGTTCACTTCGTAAGGGAGCATCATATTCTCCAACCTCTCACCATCTAAACTTGCTGCAACAAGTTATTGATGGTAGTGATATAGAAAATCATTTAGTTCGAAGTTACAAGAGAAGTTTCAATGGTTTTGCCGCAGTACTCAATGATCAACAAAGAGAAAAGCTTTCTAACATGCGAGGTGTGGTATCAGTTTTTCCAAGCCGAGAGTATCATCTTCAAACCACAAGGTCATGGGACTTCCTTGGATTACCTCAATCAATCAAAAGATCTCAAACCGCTGAGAGTGATTTGGTGATTGGAGTCATAGATAGCGGAATTTGGCCAGAGTCTGAAAGTTTCAATGATAAAGGTCTTGGTTCTATTTCAAAAAAGTGGAGGGGGGTTTGTGCAGGCGGTGTTAACTTCACTTGCAATAATAAGGTCATTGGAGCACGCTTTTACGGCATCGGAGATGATAGTGCAAGAGACGCAAATGGTCATGGAACCCACACATCATCGACAGCCGGCGGAAGTGAGGTGAAGGGTGTAAGCTTTTATGGTCTTGCAAAAGGCACTGCAAGAGGTGGAGCACCATCTTCAAGAATTGCTGCATACAAAACCTGCAACAATCTAGGTATGTGCTCTGATGATGCTATTTTATCTGCATTCGATGATGCCATTGCTGATGGAGTTGATGTCATCACTGTCTCTATGGGTAAACCACAAGCTTATGAGTTTGTGGATGATGCTTTTGCCATTGGTTCTTTTCATGCCATGGAGAATGGAATACTGACAGTGCAGGCTGCAGGAAATGATGGTCCAAATCCAAGTACTGTGAAAAGTATAGCACCTTGGGTATTTAGTGTTGCTGCCACTACCATAGATCGTCAATTCATTGATAAGCTAATTCTTGGAAATGGAAAGACTGTTATTGGTAGTTCAATTAACATTGTCCCATCAAATGGTACCAAATTTCCAATAGCTGTGCATAATGCTCAAGCTTGTCCAGCTGGAGCAAATGCATCCCCTGAAAAGTGTGATTGCATAGACAAAAATATGGTGAAGGGTAAGTTTGTTTTGTGTGGAGTATCAGGGCGTGAAGGATTGGCTTATGCAAATGGAGCAATTGGTTCAATCAATAATGTTACAGAAACTGAATTTGATATTCCTTCAATCACTCAAAGGCCTTCACTTAACTTGGAACCAAAAGACTTTGTTCATGTCCAGTCCTACACAAATTCCACTAAATACCCTGTAGCTGAACTTTTAAAGACTGAGATTTTCCATGACACCAATGCTCCTAAAATTATTTATTTCTCTTCTCGTGGCCCAAATCCTATGGTTCCTGAAATTATGAAACCAGATATAAGTGCTCCAGGAGTTAATATCTTGGCTGCATATCCACCTATGGGGACACCAAAATACAACCTATTATCTGGAACCTCGATGTCATGTCCCCACGTTGCTGGAGTTGTTGCATATGTGAGATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATCATGACCACTGCGGAACCAGTGAAAGGTACTTATGATGATTTGGTGGGTGAGTTTGCTTATGGATCTGGGAATGTCAACCCACAACAAGCTGTTCATCCTGGACTTGTTTATGACATCAGCAAAGAAGATTATGTACAAATGCTTTGCAATTATGGTTATGATGCCAAAAAAATCAAACAGATTAGTGGAGATAATTTAAGTTGCCACGTAACATCCAAAAGGTCCTTGGTGAAAGATATTAACTATCCATCAATGGTGATTCCTGTTAGGTCTTATCACAAGCGTTTCAATGTCAATATTCATAGAACAGTTACGAATGTTGGCTTTTTCAACTCAACCTACAAGGCAACTCTTATCCATCATGATCCAAAAATCAAAATTAGTGTGAAACCAAAACTTCTTACATTCAGATCATTACATGAGAAAAAATCTTTTGCTGTCACTGTCATTGGAGGAGCAAAATTAAATCAAACAATGTTTTCCTCATCGCTTATTTGGTCTGACGGTATCCACAATGTTAAGAGTCCAATTATTGTACAACTACTTCCTCTATATAGTTGA | 2190 | 0.3932 | MLNIVLLLSVSLVLTSIISSAYGAIESGDESNKLHIVYMGSLRKGASYSPTSHHLNLLQQVIDGSDIENHLVRSYKRSFNGFAAVLNDQQREKLSNMRGVVSVFPSREYHLQTTRSWDFLGLPQSIKRSQTAESDLVIGVIDSGIWPESESFNDKGLGSISKKWRGVCAGGVNFTCNNKVIGARFYGIGDDSARDANGHGTHTSSTAGGSEVKGVSFYGLAKGTARGGAPSSRIAAYKTCNNLGMCSDDAILSAFDDAIADGVDVITVSMGKPQAYEFVDDAFAIGSFHAMENGILTVQAAGNDGPNPSTVKSIAPWVFSVAATTIDRQFIDKLILGNGKTVIGSSINIVPSNGTKFPIAVHNAQACPAGANASPEKCDCIDKNMVKGKFVLCGVSGREGLAYANGAIGSINNVTETEFDIPSITQRPSLNLEPKDFVHVQSYTNSTKYPVAELLKTEIFHDTNAPKIIYFSSRGPNPMVPEIMKPDISAPGVNILAAYPPMGTPKYNLLSGTSMSCPHVAGVVAYVRSFHPDWSPAAIKSAIMTTAEPVKGTYDDLVGEFAYGSGNVNPQQAVHPGLVYDISKEDYVQMLCNYGYDAKKIKQISGDNLSCHVTSKRSLVKDINYPSMVIPVRSYHKRFNVNIHRTVTNVGFFNSTYKATLIHHDPKIKISVKPKLLTFRSLHEKKSFAVTVIGGAKLNQTMFSSSLIWSDGIHNVKSPIIVQLLPLYS* | 730 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr8g0013 | 729 | Gene3D | - | 327 | 461 | - | - | |
| Mtr8g0013 | 729 | Pfam | Subtilase family | 134 | 564 | IPR000209 | GO:0006508|GO:0008236 | |
| Mtr8g0013 | 729 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 512 | 522 | IPR023828 | - | |
| Mtr8g0013 | 729 | Pfam | Fibronectin type-III domain | 622 | 722 | IPR041469 | - | |
| Mtr8g0013 | 729 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT4.3 | 34 | 724 | - | - | |
| Mtr8g0013 | 729 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 108 | 574 | - | - | |
| Mtr8g0013 | 729 | Pfam | Peptidase inhibitor I9 | 35 | 111 | IPR010259 | - | |
| Mtr8g0013 | 729 | PRINTS | Subtilisin serine protease family (S8) signature | 133 | 152 | IPR015500 | - | |
| Mtr8g0013 | 729 | PRINTS | Subtilisin serine protease family (S8) signature | 195 | 208 | IPR015500 | - | |
| Mtr8g0013 | 729 | PRINTS | Subtilisin serine protease family (S8) signature | 511 | 527 | IPR015500 | - | |
| Mtr8g0013 | 729 | CDD | Peptidases_S8_3 | 109 | 547 | IPR034197 | - | |
| Mtr8g0013 | 729 | Gene3D | Peptidase S8/S53 domain | 135 | 587 | IPR036852 | GO:0004252|GO:0006508 | |
| Mtr8g0013 | 729 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 19 | 112 | IPR037045 | - | |
| Mtr8g0013 | 729 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 34 | 724 | IPR045051 | - | |
| Mtr8g0013 | 729 | Gene3D | - | 591 | 725 | - | - | |
| Mtr8g0013 | 729 | CDD | PA_subtilisin_like | 334 | 452 | - | - | |
| Mtr8g0013 | 729 | SUPERFAMILY | Subtilisin-like | 111 | 578 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr8g0013 | Mtr-Chr8 | 217817 | 220342 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr8g0013 | 30 | 722 | Subtilisin-like Serine Gene Family | AT5G59120 | 50.354 | 0.0 | 698 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr8g0013 | - | - | mtr:MTR_1g006990 | 1043.88 |