Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0002 ATGGAAGGATTGGATGGGTTAATAGAGAGGCTTTTGGAAGCAAGAAATAATAGGGGCAAGCGGATTCAATTAGTGGAGTCAGAAATTCGCATCCTTTGCACCAAAGCAAAAGAAGTTTTCCTCAACCAACCAATCTTACTTGAACTAGAGGCTCCAATTAACATTTGTGGTGATATACACGGGCAATATCCCGACCTATTGCGTCTATTTGAGTATGGCGGGTTTCCTCCAGATTCAAATTACCTATTTCTAGGCGACTACGTAGACAGAGGAAAGCAAAGTATAGAAACAATATGCCTCTTGCTCTCATATAAGATCAAATACCCGGAGAATTTTTTCCTTCTTAGAGGAAACCATGAATGTGCATCTATTAACAGAATTTATGGTTTTTATGATGAGTGCAAGAGAAGATTCAGTGTTCGCCTATGGAAGGTATTTACAGATTGCTTCAATTGTTTGCCTGTAGCTGCAGTGGTTGATGACAAAATTCTATGCATGCACGGTGGCCTTTCTCCCGAGATGGAGAGTTTGAATCAAATCAAAGCTATAGAAAGGCCGTTGGATGTTCCAGACCAGGGCCTCCTATGTGATCTCCTTTGGTCCGATCCAGACACAGAAGTTAAAGGGTGGGGAGAGAATGATCGTGGCGTTTCCTACACATTTGGACCAGACACGGTAGATGAGTTCTTGAAGAAAAACGATCTCGATCTTATATGTCGGGCTCATCAGGTTGTTGAAGACGGCTACCAATTCTTCGCAGACAGACAACTAGTTACAATATTTTCAGCACCAAATTATTGTGGAGAGTTCAATAATGCAGGTGCACTCATGTGCGTCGATGAAACTTTACTTTGTTCATTCCAGATCCTCAAACCCATGAGAGGAAATAAATGA 894 0.4161 MEGLDGLIERLLEARNNRGKRIQLVESEIRILCTKAKEVFLNQPILLELEAPINICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLSYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKVFTDCFNCLPVAAVVDDKILCMHGGLSPEMESLNQIKAIERPLDVPDQGLLCDLLWSDPDTEVKGWGENDRGVSYTFGPDTVDEFLKKNDLDLICRAHQVVEDGYQFFADRQLVTIFSAPNYCGEFNNAGALMCVDETLLCSFQILKPMRGNK* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0002 297 CDD MPP_PP1_PPKL 4 292 - -
Mtr8g0002 297 Pfam Serine-threonine protein phosphatase N-terminal domain 4 50 IPR031675 -
Mtr8g0002 297 PRINTS Serine/threonine phosphatase family signature 52 79 IPR006186 GO:0016787
Mtr8g0002 297 PRINTS Serine/threonine phosphatase family signature 81 108 IPR006186 GO:0016787
Mtr8g0002 297 PRINTS Serine/threonine phosphatase family signature 114 138 IPR006186 GO:0016787
Mtr8g0002 297 PRINTS Serine/threonine phosphatase family signature 148 174 IPR006186 GO:0016787
Mtr8g0002 297 PRINTS Serine/threonine phosphatase family signature 177 204 IPR006186 GO:0016787
Mtr8g0002 297 PRINTS Serine/threonine phosphatase family signature 234 254 IPR006186 GO:0016787
Mtr8g0002 297 PRINTS Serine/threonine phosphatase family signature 256 272 IPR006186 GO:0016787
Mtr8g0002 297 ProSitePatterns Serine/threonine specific protein phosphatases signature. 115 120 IPR006186 GO:0016787
Mtr8g0002 297 Gene3D - 2 297 IPR029052 -
Mtr8g0002 297 Pfam Calcineurin-like phosphoesterase 53 244 IPR004843 GO:0016787
Mtr8g0002 297 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 296 - -
Mtr8g0002 297 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 296 - -
Mtr8g0002 297 SUPERFAMILY Metallo-dependent phosphatases 20 294 IPR029052 -
Mtr8g0002 297 SMART pp2a_7 24 294 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0002 Mtr-Chr8 74540 76207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0002 53 240 Calmodulin-binding Proteins AT5G63870 33.184 6.76e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0002 K06269 - gmx:100804212 568.155