Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3930 ATGATGGTGTTATTAACTACTTGCATTATTCTTGTTCTTGTTTGGAATTGGAATTTGAATGGTGCCACTGCTGCCACAGATCCAACTGATGTTGCCTCTGTAAAGGCTATATTTCAAAGTGCAAATTCAGCACCTCAACTTGGTTGGCCTGCTAATGGTGACACTGATGATGATCCATGTGGTCAGTCTTGGAAAGGCATTACTTGTTCAGACAACCGTGTTACTCAAATTAATTTATCCAATCTTGCTCTTACTGGAACATTGCCTTATGGATTACAGGGCTTCACATCTCTCACCATTCTAGACATGAGTAACAATAATCTTGTTGGTACTATACCATACCAACTTCCTCCAAATCTACACCGCTTAAATTTTGCGAATAATAACTTGACAGGGCCACTCCCTTACTCTATTTCTAACCTCACCTCTCTCACAGACCTGAATCTCAATCACAATCAGCTCCAGCAAGCACTCAATGTCAACTTTCAAAATTTGTCTACTCTCTCCAAATTAGACCTCTCTTTCAATTCTTTGACAGGTGACCTCCCTCAGACTATGAGCTCACTAACAGGCATAACCACCATGTATCTGCAAAACAACCAATTTACAGGCGCTATTGATATTCTTGCTGATCTGCCTCTGAATAGTCTGAATGTAGAAAACAATAATTTCACTGGATGGATACCGGAGCAGTTGAAAAACATAGACCTTCAGACGGGTGGTAATGCATGGAGCTCAGGACCTGCACCACCACCTCCTCCTGGGACACCTCTAGTACCTAAAAGCAACCAACACCACAAAACTGGTGGTGGAAGAAGTACCACTGGACAAGATGCCAACAGTGACACAAGCAATGAAGGCAAAAAATCTGGAATAGGAGGTGGTGGCATAGTTGGAATCGTGATCTCCGTCATTGTTGTTGGGGCAATTGTAGCATTCTTTCTTGTGAAGAGAAAATCCAAGAAGTCATCTTCCGATTTAGAAAAACTGGGGAATCAGTCTACCGTTCCTCTTCCTTCAAATGAAGTGCCTGAAGTTACATCTGTGCAGACTTCTCCCGTATTTGACTTGAAGAAGTTTGACTCTTCTGCCTCAATAAATCTCATACCCCCACCTATCGATCGTCATAAATCATTTGATGACAACGAATTCTCAAAAAAAACCACTATTGTCAAGAAGACTATAACAGCTCCTCCAGATTTGCAATCATATTCTATAGCCGATCTTCAAATTACTACTGGCAGCTTCAGTGTGGATCATCTCGTTGGTGAGGGGTCTTTTGGGCGTGTGTACCATGCACAATTTGATGATGGAAAGGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCCTTCCCAATGATTTTTCAGAAGATTTTATAGAAATAGTGTCAAACATCTCCTGTTTACATCATCCAAATGTAACTGAGCTTGTAGGTTATTGCTCGGAGCATGGACAACACCTCTTAGTTTACGAGTTTCATAAAAATGGATCACTGCATGACTACCTTCATGTGTCAGATGAATACAGTAAACCATTGATATGGAATTCCCGTGTTAAGATAGCTTTGGGGACTGCACGTGCTTTAGAGTACTTGCATGAAGTTTGTTCTCCATCAGTTGTGCATAAGAATATTAAGTCAGCCAATATACTACTTGATGCAGAGCTTAATCCTCATCTTTCAGACTGTGGATTGGCAAGCTATATTCCAAATGCAGAGCAGATACTAAACCATAATGTTGGATCTGGATATGATGCACCTGAAGTTGCGTTGTCTGGTCAGTATACCTTTAAAAGTGATATCTACAGCTTTGGGGTTGTCATGTTGGAGCTTCTGAGTGGACGCAGACCATTTGATAGCTCAAGGGCAAGACAAGAGCAGTCTTTGGTTCGATGGGCAACACCCCAGCTTCATGACATTGATGCATTGGCTAAAATGGTTGATCCTACGCTGAAAGGGTTATATCCTGTTAAATCTCTATCACGTTTTGCTGATGTTATTGCTCTTTGCGTACAGCCGGAGCCTGAATTTCGACCACAAATGTCAGAGGTGGTTCAAGCACTGGTACGATTAGTGCAGCGAGCTAACATGAGCAGGCGGACATTCACATTTGGAAGTGATCATGGAGGATCCCTACGAGGAAGTGATGAGCCAGCTATACGAGACATCTAA 2172 0.4185 MMVLLTTCIILVLVWNWNLNGATAATDPTDVASVKAIFQSANSAPQLGWPANGDTDDDPCGQSWKGITCSDNRVTQINLSNLALTGTLPYGLQGFTSLTILDMSNNNLVGTIPYQLPPNLHRLNFANNNLTGPLPYSISNLTSLTDLNLNHNQLQQALNVNFQNLSTLSKLDLSFNSLTGDLPQTMSSLTGITTMYLQNNQFTGAIDILADLPLNSLNVENNNFTGWIPEQLKNIDLQTGGNAWSSGPAPPPPPGTPLVPKSNQHHKTGGGRSTTGQDANSDTSNEGKKSGIGGGGIVGIVISVIVVGAIVAFFLVKRKSKKSSSDLEKLGNQSTVPLPSNEVPEVTSVQTSPVFDLKKFDSSASINLIPPPIDRHKSFDDNEFSKKTTIVKKTITAPPDLQSYSIADLQITTGSFSVDHLVGEGSFGRVYHAQFDDGKVLAVKKIDSSVLPNDFSEDFIEIVSNISCLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDYLHVSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHLSDCGLASYIPNAEQILNHNVGSGYDAPEVALSGQYTFKSDIYSFGVVMLELLSGRRPFDSSRARQEQSLVRWATPQLHDIDALAKMVDPTLKGLYPVKSLSRFADVIALCVQPEPEFRPQMSEVVQALVRLVQRANMSRRTFTFGSDHGGSLRGSDEPAIRDI* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3930 723 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524
Mtr7g3930 723 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 20 717 - -
Mtr7g3930 723 Pfam Protein kinase domain 417 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3930 723 SUPERFAMILY Protein kinase-like (PK-like) 398 688 IPR011009 -
Mtr7g3930 723 SUPERFAMILY L domain-like 36 234 - -
Mtr7g3930 723 MobiDBLite consensus disorder prediction 238 290 - -
Mtr7g3930 723 MobiDBLite consensus disorder prediction 327 347 - -
Mtr7g3930 723 ProSiteProfiles Protein kinase domain profile. 416 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3930 723 Gene3D Ribonuclease Inhibitor 30 249 IPR032675 -
Mtr7g3930 723 MobiDBLite consensus disorder prediction 324 347 - -
Mtr7g3930 723 Gene3D Phosphorylase Kinase; domain 1 377 493 - -
Mtr7g3930 723 MobiDBLite consensus disorder prediction 703 723 - -
Mtr7g3930 723 MobiDBLite consensus disorder prediction 261 288 - -
Mtr7g3930 723 PANTHER OS01G0253100 PROTEIN 20 717 IPR045271 GO:0004714|GO:0006468
Mtr7g3930 723 Gene3D Transferase(Phosphotransferase) domain 1 495 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3930 Mtr-Chr7 56088914 56095760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3930 1 701 Strubbelig Receptor Gene Family AT1G53730 62.853 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mtr7g3930 Pkinase 6.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3930 - - gmx:100807707 1075.08