Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3928 ATGGCTGAGGAGGAACTGGATAAACCTTTGCTTGATCCTGACAATTTCAACCGAGAGGGCATTGATTTGGAGCGCATACCACTAGAACAAGTTTTCGAACTGTTGAAAACATCACCAGGAGGACTTTCATCCGACGATGCTGAAGCCCGACTTCACATATTTGGCCCAAACAAACTCGAAGAGAGGAAAGAGAACAAACTATTGAAGTTTCTTAGCTTTATGTGGAATCCTCTTTCATGGGTTATGGAAGCAGCAGCGTTGATGGCAATTGTCCTTGCCAATGGCGGAGAGGACGGTCCTGATTGGCAAGACTTTGTAGGGATTATATGCTTACTGGTAATAAACTCAACAATTAGTTTTATAGAAGAAAATAATGCTGGTACTGCTGCAGCAGCACTAATGGCTCGCTTAGCTCCTCGAACAAAGGTTAGAAGAAATGGTCAGTGGAAAGAAGATGATGCGGCTATTTTAGTACCTGGGGATATAATCAGCATAAAGCTAGGAGATATCATTCCAGCTGATGCTCGCTTGCTTGAAGGAGACCCTCTCAAAATTGACCAGTCAGCCCTTACTGGAGAGTCCCTACCTGTCACGAAAAAAACTGGTGACGAGGTCTTTTCAGGTTCAACGTGTAAACACGGAGAGATTGAAGCTGTAGTGATAGCAACAGGGGTTCATTCCTTTTTTGGAAAAGCAGCACACTTGGTTGACAGTACCGAAGTTGTTGGACATTTTCAGAAGGTTCTTACCTCAATTGGCAACTTCTGCATTTGCTCAATAGCTATAGGGATGATTCTTGAAATAATTATAATGTTCCCTGTGGAGCACCGTTCATACAGGGATGGAATCAACAACCTTCTTGTTCTCCTGATTGGAGGAATTCCCATAGCTATGCCAACAGTATTATCTGTAACACTTGCCATTGGATCCCATCGCCTTTCTCAGCAGGGAGCTATCACAAAAAGAATGACAGCAATTGAAGAAATGGCAGGCATGGATGTCCTATGCAGTGACAAAACGGGTACTCTTACGCTTAATCGCCTGTCTGTTGATCGGAATCTTATAGAGGTCTTTAACAGCAATATGGACAAAGATATGATTGTTCTACTGGCAGCTAGGGCAGCAAGATTGGAAAATCAGGATGCCATTGATGCTGCCATCGTTAATATGCTAGCTGATCCAAAGGAGGCACGTACAAACATAACTGAAGTTCATTTTCTACCATTCAATCCCGTAGGCAAACGTACAGCTATAACATACATCGATTCTGATGGCAACTTTTACAGGGCCAGCAAAGGAGCACCGGAACAGATTCTAAATATGTGCCAAGAGAAAGACGTGATTTCCAGAAAAGTGCTTACAATCATAGACAAATTTGCTGAAAGGGGATTGCGATCTCTTGCAGTTGCTTTTCAGGAAGTACCTGAAAAATCAAAGGATAGCCCTGGAGGTCCTTGGACGTTTTGTGGTTTATTGCCTTTGTTTGATCCACCAAGACATGATAGTGCCGAGACCATCCGAAGAGCACTTAACCTTGGTGTTTGTGTTAAGATGATTACAGGGGATCAGTTGGCTATTGCAAAGGAGACGGGCAGAAGACTTGGCATGGGGACAAATATGTACCCTTCTTCATCTTTGTTGGGTCGCGACAAAGATGAGAATGAAGCTCTCCCAGTAGACGAGCTCATTGAAAAGGCAGATGGCTTTGCTGGTGTATTTCCTGAACACAAATATGAAATAGTTAAAATTTTACAAGAAAAACAGCATGTTGTTGGAATGACTGGAGATGGAGTAAATGATGCCCCGGCATTGAAGAAAGCAGACATTGGAATAGCTGTGTCTGATGCTACAGATGCCGCAAGAAGTGCTGCTGATATAGTCTTAACTGAGCCTGGCTTAAGTGTTATTATCAGCGCTGTGTTAACTAGCCGAGCTATATTTCAAAGGATGAAAAATTATACAATATATGCAGTCTCCATCACAATAAGGATAGTGCTTGGCTTTGTTCTCCTAGCATCAATCTGGGAGTATGATTTTCCACCCTTCATGGTCCTGATCATTGCAATCCTAAATGATGGGACTATCATGACCATAGCTAAAGACAGAGTAAGGCCATCCCCAACACCTGACAGTTGGAAGCTGCCTGAGATATTTGCAACAGGAGTAGTGATTGGGACTTACCTTGCTTTGGTTACTGTCCTCTTCTACTGGGTAGTAGTCGAGACCACTTTCTTTGAGACCCACTTCCATGTAACCACCTTATCTAGTGACAGTGAGAAAGTTTCCTCAGCTGTATATCTGCAAGTTAGCATCATTAGCCAGGCTCTAATTTTTGTTACTCGTAGCCGTGGTTGGTCATTTCTGGAGAGACCTGGAGCTTTACTGATGTGCGCCTTTGTAATAGCTCAGCTGGTGGCCACCTTGATCGCAGTCTATGCAAATATCAGTTTTGCTAAAATTCAAGGGATTGGATGGGGATGGGCTGGTGTTATATGGTTGTTCAGTTTAATCTTCTATGTACCCTTGGACATCATCAAGTTCACAGTGCGCTATGCCTTGAGTGGAGAAGCATGGAATCTCCTATTTGACAGAAAGACTGCTTTTACATCTAAGAAAGACTATGGGACGGAAGACAGGGCAGCAAAGTGGGTTCTTTCTCAGGGAAGTCTGCAAGGACTGAATCAGATGACCTCAGGCTTGGAGGTCAGTGGAAGGCGGTCTTCTATGATAGCTGAACAGGCCAGAAGACGTGCTGAAATAGCCAGGCTGGGGGAATTGCACACGCTCAGAGGACATGTAGAATCTGTTTTGAAACTCAAAAATTTAGACCTGAAGGCGATCCAATCAGCCCATACAGTCTGA 2862 0.4361 MAEEELDKPLLDPDNFNREGIDLERIPLEQVFELLKTSPGGLSSDDAEARLHIFGPNKLEERKENKLLKFLSFMWNPLSWVMEAAALMAIVLANGGEDGPDWQDFVGIICLLVINSTISFIEENNAGTAAAALMARLAPRTKVRRNGQWKEDDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKKTGDEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQKVLTSIGNFCICSIAIGMILEIIIMFPVEHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLSVDRNLIEVFNSNMDKDMIVLLAARAARLENQDAIDAAIVNMLADPKEARTNITEVHFLPFNPVGKRTAITYIDSDGNFYRASKGAPEQILNMCQEKDVISRKVLTIIDKFAERGLRSLAVAFQEVPEKSKDSPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGRDKDENEALPVDELIEKADGFAGVFPEHKYEIVKILQEKQHVVGMTGDGVNDAPALKKADIGIAVSDATDAARSAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFVLLASIWEYDFPPFMVLIIAILNDGTIMTIAKDRVRPSPTPDSWKLPEIFATGVVIGTYLALVTVLFYWVVVETTFFETHFHVTTLSSDSEKVSSAVYLQVSIISQALIFVTRSRGWSFLERPGALLMCAFVIAQLVATLIAVYANISFAKIQGIGWGWAGVIWLFSLIFYVPLDIIKFTVRYALSGEAWNLLFDRKTAFTSKKDYGTEDRAAKWVLSQGSLQGLNQMTSGLEVSGRRSSMIAEQARRRAEIARLGELHTLRGHVESVLKLKNLDLKAIQSAHTV* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3928 953 Gene3D - 333 631 IPR023214 -
Mtr7g3928 953 PANTHER CALCIUM-TRANSPORTING ATPASE 3 933 - -
Mtr7g3928 953 Pfam Cation transporter/ATPase, N-terminus 26 88 IPR004014 -
Mtr7g3928 953 PRINTS H+-transporting ATPase (proton pump) signature 452 470 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr7g3928 953 PRINTS H+-transporting ATPase (proton pump) signature 566 582 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr7g3928 953 PRINTS H+-transporting ATPase (proton pump) signature 594 610 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr7g3928 953 PRINTS H+-transporting ATPase (proton pump) signature 625 650 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr7g3928 953 PRINTS H+-transporting ATPase (proton pump) signature 766 787 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr7g3928 953 Gene3D - 139 223 - -
Mtr7g3928 953 SUPERFAMILY HAD-like 332 641 IPR036412 -
Mtr7g3928 953 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 3 933 - -
Mtr7g3928 953 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 108 357 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr7g3928 953 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 569 673 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr7g3928 953 CDD P-type_ATPase_H 41 847 IPR006534 GO:0008553|GO:0016021|GO:0120029
Mtr7g3928 953 Pfam haloacid dehalogenase-like hydrolase 332 608 - -
Mtr7g3928 953 Gene3D - 905 953 - -
Mtr7g3928 953 ProSitePatterns E1-E2 ATPases phosphorylation site. 338 344 IPR018303 -
Mtr7g3928 953 SUPERFAMILY Calcium ATPase, transduction domain A 139 236 IPR008250 -
Mtr7g3928 953 Gene3D - 348 495 IPR023299 GO:0000166
Mtr7g3928 953 SMART Cation_ATPase_N_a_2 22 94 IPR004014 -
Mtr7g3928 953 SFLD p-type atpase 318 645 IPR044492 -
Mtr7g3928 953 Pfam E1-E2 ATPase 137 315 - -
Mtr7g3928 953 SFLD C1.7: P-type atpase like 318 645 - -
Mtr7g3928 953 PRINTS P-type cation-transporting ATPase superfamily signature 186 200 - -
Mtr7g3928 953 PRINTS P-type cation-transporting ATPase superfamily signature 336 350 - -
Mtr7g3928 953 PRINTS P-type cation-transporting ATPase superfamily signature 490 501 - -
Mtr7g3928 953 PRINTS P-type cation-transporting ATPase superfamily signature 512 522 - -
Mtr7g3928 953 PRINTS P-type cation-transporting ATPase superfamily signature 594 613 - -
Mtr7g3928 953 PRINTS P-type cation-transporting ATPase superfamily signature 617 629 - -
Mtr7g3928 953 Gene3D - 101 821 - -
Mtr7g3928 953 SUPERFAMILY Calcium ATPase, transmembrane domain M 22 853 IPR023298 -
Mtr7g3928 953 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 41 812 IPR006534 GO:0008553|GO:0016021|GO:0120029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3928 Mtr-Chr7 56069750 56080154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3928 4 953 Primary Pumps ATPases AT1G17260 80.042 0.0 1533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3928 K01535 - tcc:18596330 1612.05