Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr7g3927 | ATGATGGGCAGCAACAATGGATCACCATCACAGTTTGGGGACACAACGCTGACAAAAGTGTTCGTTGGAGGTCTTGCCTGGGAAACTCCGAAAGACACATTAAGAGAACACTTCGAAAAATACGGAGACATCCTTGAAGCTGTCATAATTTCTGATAAGGTTACCGGCAGATCCAAAGGGTATGGATTTGTAACATTCAAAGATGCAGATTCTGCAAAGAAGGCTTGCGAGGAACCAACTGTGATCATCAATGGTCGACGAGCCAACTGCAATATCGCTTCTCTTGGTGCTCGTCGTCCAAGGTCTTCTCCCATCACTCCTCCTCCTTCTCCTCCTCCTCTTCCATACACACAAGGAGGAACAAAGAATATCCACCGTAGAAATCAGCAGCAGGTTCAATGGTATTATCCGGTGGTAACACCTACACCTCCTTCCTCAATATTCCATCATCATCATGCCCTTCCTTTCTACGGGTACACGCCCACCTACATTGCAACAGATCATATGAATTACAATTACAATCAGCAGAAACTGAGCTATGGAATGGGTGGGGGCTACGTGTACCCGCCGCCGAGGCAGGCTATTGTGGGTGCGATGCCAATCATGTACCACCACCCTGCTCCTGTCTACAGATCAACCGAGGCTATGGCAATGGGTGTCCCTCCACCTCAAATCTTCCACCAAACTCATCAATATCATTATGCCCCATCCATCACTCCTACTACAGGTACAGTTGGCACGGGTGAATGCTTCAAAAGGGTAGTGGTCTGA | 771 | 0.4786 | MMGSNNGSPSQFGDTTLTKVFVGGLAWETPKDTLREHFEKYGDILEAVIISDKVTGRSKGYGFVTFKDADSAKKACEEPTVIINGRRANCNIASLGARRPRSSPITPPPSPPPLPYTQGGTKNIHRRNQQQVQWYYPVVTPTPPSSIFHHHHALPFYGYTPTYIATDHMNYNYNQQKLSYGMGGGYVYPPPRQAIVGAMPIMYHHPAPVYRSTEAMAMGVPPPQIFHQTHQYHYAPSITPTTGTVGTGECFKRVVV* | 257 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr7g3927 | 256 | PANTHER | GEO13361P1-RELATED | 5 | 234 | - | - | |
Mtr7g3927 | 256 | SMART | rrm1_1 | 19 | 91 | IPR000504 | GO:0003723 | |
Mtr7g3927 | 256 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 20 | 85 | IPR000504 | GO:0003723 | |
Mtr7g3927 | 256 | Gene3D | - | 3 | 104 | IPR012677 | - | |
Mtr7g3927 | 256 | PANTHER | RNA-BINDING PROTEIN ARP1-RELATED | 5 | 234 | - | - | |
Mtr7g3927 | 256 | SUPERFAMILY | RNA-binding domain, RBD | 17 | 105 | IPR035979 | GO:0003676 | |
Mtr7g3927 | 256 | MobiDBLite | consensus disorder prediction | 102 | 116 | - | - | |
Mtr7g3927 | 256 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 18 | 95 | IPR000504 | GO:0003723 | |
Mtr7g3927 | 256 | CDD | RRM_RBM24_RBM38_like | 18 | 93 | - | - | |
Mtr7g3927 | 256 | MobiDBLite | consensus disorder prediction | 96 | 120 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr7g3927 | Mtr-Chr7 | 56062586 | 56064168 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr7g3927 | 14 | 191 | C2H2 Transcription Factor Family | AT2G19380 | 28.358 | 2.00e-16 | 76.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr7g3927 | - | - | mtr:MTR_7g117495 | 509.605 |