Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3923 ATGGAACAAGTGAAAGGGTATTGTTCTGATAGCAGGGACGAAGAGGAGGAAGAGGAAGGTGCAGATGATATCATCGCAATCACTGGAGGAGGAGGAGGAGAAGAAATTAGCAGCAGCAGCAGCAGGTTACAGTTACAGACGTCACAGCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGTGGGGGTTGGGAAGTTGAATGAAGAGGAGGTAGATTTGATGGAGTTAAGACTTGGAGGAGGGGGAATTAGCAAGAGCAAGGGAAGTGATGAAGGATTAGGAATAGGATGTTGTTCAAATTCAAAGGATGAGGAAGAGGCAGTAGTAGTAGAGAAAGAGCATATGTTTGACAAAGTGGTGACACCTAGTGACGTAGGGAAACTAAATCGACTTGTGATTCCAAAGCAACACGCAGAGAAGTACTTCCCTTTGGATTCTTCTACCAACGAGAAAGGGCTTCTCCTAAATTTTGAAGATCGAAATGGTAAGATGTGGCGGTTCAGGTATTCTTATTGGAACAGTAGCCAGAGTTATGTGATGACAAAAGGTTGGAGCCGTTTCGTTAAGGAGAAGAAACTTGATGCTGGTGACATTGTATCATTCCACCGTGGACGTGCTGAATTGCACAGACACAGGTTGTACATAGATTGGAGGCCAAGGGCTCATTCTCAGTACTCTCATCATCACCACCAGTACCTCATCCCTCAATATCCTCCTCCTCCTCCTTCACTGCCTTTCTATCTTCCTCCCAATCATCACTATCACTACTCATCATATGCTGCTACTGCTAGATCATTATACACCTCCCCTCAATATTCTCACCTTCCTAATCCTAATTACGCTGCCCCTTCTCCTACAATATCTCACCCTCAATATTACAACACCAATTTCTATACTACTACTACCACTACTACTACACTTCATCAACAACAACAACAACAACAGTACCACCACCCTGCTCCTGCTGCTGATCACCTGCTTGTTGATAATAATAACAACATGAATCCCCTCTATTATCTCACCTCCTCGCCAATTACGCCACCATCAACAACCACCGCAACTGGTGATCAACATTTGCAGGGATCCGTGGTGCAAGGGCACCAACAAGATCAGAGAAATGTCAATGTCCCTATGAATATGATAATTGATTCAGTTCCAGTTGCACATCATCACCTCGGAGGCAATGTTAATACTGGCGGAAAACGGTTGAGACTATTTGGGGTTAACATGGAATGTGATTCTTCTTCTTCTTCAGAACCACCACAAGTGACAACAACTTCTGGGGATCATGATCATCATCACAGAGGGGGAACTTCACTGCACTTTGATTTGGATCCTTCTAATTCCCAATATCGCCGGCACCACTGA 1374 0.4425 MEQVKGYCSDSRDEEEEEEGADDIIAITGGGGGEEISSSSSRLQLQTSQQEEEEEEEEEEEDVGVGKLNEEEVDLMELRLGGGGISKSKGSDEGLGIGCCSNSKDEEEAVVVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFHRGRAELHRHRLYIDWRPRAHSQYSHHHHQYLIPQYPPPPPSLPFYLPPNHHYHYSSYAATARSLYTSPQYSHLPNPNYAAPSPTISHPQYYNTNFYTTTTTTTTLHQQQQQQQYHHPAPAADHLLVDNNNNMNPLYYLTSSPITPPSTTTATGDQHLQGSVVQGHQQDQRNVNVPMNMIIDSVPVAHHHLGGNVNTGGKRLRLFGVNMECDSSSSSEPPQVTTTSGDHDHHHRGGTSLHFDLDPSNSQYRRHH* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3923 457 MobiDBLite consensus disorder prediction 1 67 - -
Mtr7g3923 457 MobiDBLite consensus disorder prediction 33 47 - -
Mtr7g3923 457 MobiDBLite consensus disorder prediction 50 67 - -
Mtr7g3923 457 Gene3D - 111 233 IPR015300 -
Mtr7g3923 457 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 57 432 IPR044800 GO:0003700
Mtr7g3923 457 ProSiteProfiles B3 DNA-binding domain profile. 118 218 IPR003340 GO:0003677
Mtr7g3923 457 Coils Coil 40 63 - -
Mtr7g3923 457 SUPERFAMILY DNA-binding pseudobarrel domain 115 209 IPR015300 -
Mtr7g3923 457 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 57 432 - -
Mtr7g3923 457 MobiDBLite consensus disorder prediction 413 427 - -
Mtr7g3923 457 CDD B3_DNA 116 211 IPR003340 GO:0003677
Mtr7g3923 457 Pfam B3 DNA binding domain 118 217 IPR003340 GO:0003677
Mtr7g3923 457 MobiDBLite consensus disorder prediction 413 457 - -
Mtr7g3923 457 SMART B3_2 118 223 IPR003340 GO:0003677
Mtr7g3923 457 MobiDBLite consensus disorder prediction 428 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3923 Mtr-Chr7 56000624 56003382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3923 113 287 B3 DNA Binding Superfamily AT1G01030 63.277 8.65e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mtr7g3923 B3 8.3e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3923 - - mtr:MTR_7g117455 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3923 7 56000624 56003382 Mtr7g3923 7 56000624 56003382 ECH