Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3920 ATGGATGCAGCAGCATACTCCTCTGGAGAAGACGTCGTTCTCAAGACAAGAAAGCCATATACAATCACAAAACAAAGAGAACGATGGACTGAAGACGAACATAATCGATTTCTAGAAGCCCTCAAGCTATATGGCCGAGCATGGCAGCGTATAGAAGAACATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCGCAAAAATTCTTTTCAAAGTTGGAGAAGGAAGCACTTGTAAAAGGTGCTGCATTAGGACAAGCTCTTGACATAGACATCCCCCCTCCACGGCCCAAAAGAAAACCAAGCAATCCTTATCCTCGCAAGACCAATGTTGGTACCCCAACATTACATAGTGGAGCTAAGTATGGAAAGCCACTTATTGCAATTGCATCTTCACATGGTAAACAAGCAATGGATTTTGAGAAAGAATCACTTCTAGAGGAGCATAAAGATGAGGAAAGGCCAACAACGGTAAAAGAAAATAACGATGAAAATTGTTTAAAAGTATTAACAATCCTCAAGGAGGCACCTTGTTCATCTGTATCTTCGGCAATCAAGAGTTCAATCTCAATGTCAGTGCCACAGACAAATTCCTGCACCATAAGGGGGTTTACACCTTCAGTGAAAGAGGTAATAACACGAGATGAAACAAATGAATCTTTTCCTACTACTGAGATTGAAAACCAGATGTTGAAGATAGATGATGGCAAACACACACAAAAGAACGATGGTATTTGTCGAACCTCTAAGTTGGAGAATTGTTCTCCTAAATCGGTTCAATCCGAGAAAACAGATGGTCTTACTTCTGCATTAACAATTGATGAGATGCAAAGTAATCAGAATTACCCAAGACATATCACTGTGCACGTTGTTGATGGGAACTTTGGAACTAGTACTCAAAGTCCATCACAAAATATGTTGATTCAAGACTCCACATTTCAGCCAATAGGAGGGATTAATGTGCAGCCTAATCTCTTCGCAAATCCAGCTGCATCAAACACAAGTGAAAATCAAAATAACATGGCACGATCCTCTAGTCATCAATCATTTCCTCCTTGTCCTCCATTTGCACATAACCATGCTGATTACCAATCCTTTCTCAACATGTCTTCTACATTTTCAAGTCTTATTGTCTCTACCTTGCTGCAACACCCTGCAGCTCATGCTGCAGCAAGTTTTGCTGCTACATTTTGGCCGTATGCAAATGTAGAATCTTCAGCTGATTCTCCTGCTTGCTCTCAAGGAGGTTTCCCATCTAGACAAATTGGTTCACCTCCTAGTGTAACAGCTATTGCAGCTGCTACAGTAGCTGCTGCAACTGCATGGTGGGCAGCTCATGGACTGCTTCCTGTGTGCGCTCCACTCCAGACAGCTTTTGCCTGTCCTCCTGCATCAACAACTGTAGCTCCATCAACAAATATTAGTAAAGAACCACCTAAGACAGATCAAGGAGATATTACACTACATAATCCTCCTCTGCAAGATCAGTTACTAGATCCAGAAAACTCAGAAGCTTTGCAAGCTCAACATTCAGGTTCTAAGTCACCAGCTGTTTCTTCATCTGAATCAGAGGAGAGTGGAGATGCCAAGTTAAATACTTCATCAAAGGCCACTATTAATCTTGATATAAACCAACCAATTTCTGAGAACCCTGATTCCAACAAAATGGAGGGCAGAAAACTGATAGACCGGTCTTCTTGTGGTTCCAACACAACCTCTAGCTGTGAAGAGACTGATGCGCTAGAGAAGGATGAGAAAGAAAAGGAAGAATGTAAAATACCTGATGCGGACCATTTAGCTACCGATCCTAGTAGTCGTCGATATAGAAGCATTAGCAACCTTCTTGATTCTTGGAAGGAGGTGTCTGAAGAGGGACGACTTGCCTTTCGGGCTCTATTCTCCAGAGAGGTGTTGCCCCAAAGCTTTTCACCTCCTCATGATTTGATAAATAAGGATAATCAGATGGACAACATGAAGGATAACGAGCAAAAAACAGACCACAAAGATCACCTTGAGAGCAAGAAATGCATTTGTAATTGTGACCAGGCACAGCAAAACCTACCATTTGTACAAAATAACAATGAGGAGGGATTTCTAACCATGGGTCTTGGACAAGGTAAACTTAAGACTCGTCGAACAGGGTTCAAACCTTACAAAAGATGTTTAGTAGAGGCCAAGGAAAACAGGGGCGGAACGGCTTGCAACCAAGTTGAAGAGACGGGTCCCAAGAGGATACGCCTGGAAGGGGGGACTTCTATTTGA 2265 0.423 MDAAAYSSGEDVVLKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGAALGQALDIDIPPPRPKRKPSNPYPRKTNVGTPTLHSGAKYGKPLIAIASSHGKQAMDFEKESLLEEHKDEERPTTVKENNDENCLKVLTILKEAPCSSVSSAIKSSISMSVPQTNSCTIRGFTPSVKEVITRDETNESFPTTEIENQMLKIDDGKHTQKNDGICRTSKLENCSPKSVQSEKTDGLTSALTIDEMQSNQNYPRHITVHVVDGNFGTSTQSPSQNMLIQDSTFQPIGGINVQPNLFANPAASNTSENQNNMARSSSHQSFPPCPPFAHNHADYQSFLNMSSTFSSLIVSTLLQHPAAHAAASFAATFWPYANVESSADSPACSQGGFPSRQIGSPPSVTAIAAATVAAATAWWAAHGLLPVCAPLQTAFACPPASTTVAPSTNISKEPPKTDQGDITLHNPPLQDQLLDPENSEALQAQHSGSKSPAVSSSESEESGDAKLNTSSKATINLDINQPISENPDSNKMEGRKLIDRSSCGSNTTSSCEETDALEKDEKEKEECKIPDADHLATDPSSRRYRSISNLLDSWKEVSEEGRLAFRALFSREVLPQSFSPPHDLINKDNQMDNMKDNEQKTDHKDHLESKKCICNCDQAQQNLPFVQNNNEEGFLTMGLGQGKLKTRRTGFKPYKRCLVEAKENRGGTACNQVEETGPKRIRLEGGTSI* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3920 754 MobiDBLite consensus disorder prediction 467 481 - -
Mtr7g3920 754 MobiDBLite consensus disorder prediction 331 353 - -
Mtr7g3920 754 MobiDBLite consensus disorder prediction 90 120 - -
Mtr7g3920 754 PANTHER SWI/SNF COMPLEX-RELATED 5 736 - -
Mtr7g3920 754 SMART sant 25 73 IPR001005 -
Mtr7g3920 754 SUPERFAMILY Homeodomain-like 20 76 IPR009057 -
Mtr7g3920 754 CDD SANT 28 71 IPR001005 -
Mtr7g3920 754 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 75 IPR017930 -
Mtr7g3920 754 MobiDBLite consensus disorder prediction 467 605 - -
Mtr7g3920 754 MobiDBLite consensus disorder prediction 578 605 - -
Mtr7g3920 754 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 24 73 IPR006447 GO:0003677
Mtr7g3920 754 Gene3D - 28 75 - -
Mtr7g3920 754 ProSiteProfiles Myb-like domain profile. 21 71 IPR001005 -
Mtr7g3920 754 MobiDBLite consensus disorder prediction 497 553 - -
Mtr7g3920 754 Pfam Myb-like DNA-binding domain 26 69 IPR001005 -
Mtr7g3920 754 ProSiteProfiles SANT domain profile. 24 75 IPR017884 -
Mtr7g3920 754 PANTHER PROTEIN LHY 5 736 - -
Mtr7g3920 754 MobiDBLite consensus disorder prediction 331 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3920 Mtr-Chr7 55942298 55951409 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr7g3920 Myb_DNA-binding 7.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3920 K12133 - gmx:778086 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3920 7 55942298 55951409 Mtr7g3920 7 55942298 55951409 ECH