Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3918 ATGGCACCTCCTTCAACAGAATCTAATCAACCACTTGCTAATGGTAAAGAAAAACATGTTGTTAAACAAGAAGAAGAAAAAGAAGATAACGATGCTCTTGAATTTTGCACACAACTAACAGGTTCAATTGTTGTTCCATTGGCTTTGAGGTCTGCTATTGATCTTGGGATCTTTGACATCCTATCCAAAGCTGGTAATGGTGCACAACTCTCTGCAGATGATATTGCTGTTAAGATTGGAACCAAAAACCCAGAAGCAGCAACAATGTTAGATCGTCTTCTTAGGTTGTTGGCAAGTCACTCTATTCTAAACTCCTATGTTCCTCAACATCCTCAAACCCTTGAGAGATTCTACAGCCTCTCAAACCACTCCAAATATTTTGTGACTGATGCTGATGGTGTCTCTTTGGGACCCACTTTGGCATTACTTCTAGACAACGTCTTCTACCAAAGCTGGTCGGAGTTAAAAGGAGCGATCATGGAAGGAGGAATAGCGTTCAATAGGGTTTATGGAATGCATGCGTTTGAGTATCCACGTGTGGACCCAAGGTTCAATGATGTTTTCAACAAAGCTATGGTTAATTCAACAACTATAAACATGAAGAGGATTATTGATTGTTATCAAGGTTTTGACCACATAACTAAGCTAGTTGATGTTGGTGGTGGTCTTGGAATTAACCTCAAATTAATCACATCCAAATATTCACATATTCAGGGAATTAATTTTGACTTGCCTCATGTACTACAACATGCCCCTGTCTACCCAGGTGTGGAACATGTGGGGGGAGATATGTTTGAGAGCGTTCCTGCTGGGGATGCCATTTTTATGAAGTGGATACTTCACGATTGGAGTGATGAACATTGCTTGAAGCTGTTGAAAAATTGTTACAAAGCTATTCCTGAGGATGGAAAGGTTATTGTGGTGGACACAATCCTTCCTGTTATGCCAGAGACAACAGCCAATGCAAAGACTGCTTGCATGTCTGATGTTTTAATGATGACTCAAAATCCAGGAGGAAAAGAGCGAACTGAGCATGAATTCAAGGAATTGGCTAAAGGATCTGGATTTAGTGCCATCAAACCTATATGCTGTGTATCTGGATTGTGGGTTATGGAGTTCTTTAAATAG 1128 0.4025 MAPPSTESNQPLANGKEKHVVKQEEEKEDNDALEFCTQLTGSIVVPLALRSAIDLGIFDILSKAGNGAQLSADDIAVKIGTKNPEAATMLDRLLRLLASHSILNSYVPQHPQTLERFYSLSNHSKYFVTDADGVSLGPTLALLLDNVFYQSWSELKGAIMEGGIAFNRVYGMHAFEYPRVDPRFNDVFNKAMVNSTTINMKRIIDCYQGFDHITKLVDVGGGLGINLKLITSKYSHIQGINFDLPHVLQHAPVYPGVEHVGGDMFESVPAGDAIFMKWILHDWSDEHCLKLLKNCYKAIPEDGKVIVVDTILPVMPETTANAKTACMSDVLMMTQNPGGKERTEHEFKELAKGSGFSAIKPICCVSGLWVMEFFK* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3918 375 Gene3D Vaccinia Virus protein VP39 128 375 IPR029063 -
Mtr7g3918 375 Pfam Dimerisation domain 48 98 IPR012967 GO:0046983
Mtr7g3918 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 373 IPR029063 -
Mtr7g3918 375 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 37 375 IPR016461 GO:0008168
Mtr7g3918 375 SUPERFAMILY "Winged helix" DNA-binding domain 27 130 IPR036390 -
Mtr7g3918 375 PIRSF O-mtase 14 375 IPR016461 GO:0008168
Mtr7g3918 375 Pfam O-methyltransferase domain 152 357 IPR001077 GO:0008171
Mtr7g3918 375 PANTHER O-METHYLTRANSFERASE 1 375 IPR016461 GO:0008168
Mtr7g3918 375 Gene3D - 13 127 IPR036388 -
Mtr7g3918 375 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 375 - -
Mtr7g3918 375 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3918 Mtr-Chr7 55924942 55926678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3918 29 375 Monolignol Biosynthesis Gene Families AT5G54160 53.161 9.52e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3918 K13066 - gmx:100789402 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3918 7 55924942 55926678 Mtr7g3918 7 55924942 55926678 ECH