Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3915 ATGGGTGATCATAACAATAAGTTTGTTCCTCCCACGATGCTTAGGGTCTTACTCGTTGAACCTGATGATTCTACTCGCCACATTATTTCTGCACTTCTTCGCAACTGCGGCTACAAAGTTGCAGCTGTTCGTGATGGGTTAAAGGCATGGGAAACATTAAAGAATAAATCACTTGACATAGATCTCGTATTAACAGAAGTCGATCTCCCATCAATCTCTGGTTTTTCATTACTTACCCAAATCATGGACCATCACAATTGCAAAAACATTCCTCTCATAATGATGTCTTCTCAAGATTCAGTTAGCACTGTATTCAAATTCATGCTCAACGGGGCTGTCGATTTTCTCATTAAACCAGTTCGCAGGAATGAGCTTAGGAACTTGTGGCAGCATGTGTGGAGAAGAAATACTACTATTACCATGCCTCCTCAAAATATAACATTTCCACAGAATAAACTTGATGTTGCTGCAGAAAACAATGCTGCAAGCAATCATTCTAGTGGTTCTGTGGCTTCCACACACAAAAATATTGAATGCAGTGAAAAAAATAGTGAGCCTCATGATAATTCTATCAAATATGAAAGGGAGTCGGCTGAGTATAAGGACGTAACTGGAGAGAAATCAACTACAATAGCATCTAAAGCTGCAGGGTGTGACAAAATTTCAACAGGTTTAAGGCTTGGTCAAAACTATGATTATAGTGAAACAGAAAACCGTGATGAAGTGTTAGGAACAGAGTTAAGCAAAGCCCATCCTCATATTAATACAAAGATTCATCAAAGCAATAATGAACTAGAAGACCATTCTGCTGGAGCTATTGACTTGATGGCCACTTTTGATAAATATCCAAAGAACAATCATGCAAATTGTAGTTTCAGTGGTGGTAATACCGCCAAGTTTGATTTTGATACACAATTTGAACTTTCTTTACAAAGAGATTCTCCTGGCAGCCCACCTAAACCTACCACTGAAGAAAGGCAAATATTGAATCATTCAAATGCTTCTGCGTTTTCTTGGTATGGCAGCAGTATGGTGTTGCAGCCTTTATTTCCAACAAAGAGTTCTCATGAATCACAAAAATTATCTGAAAATATAAACACTACTCATCATTATGATGGAAAAAAACAAAAGCAGGAAAATATCACATATCTGGTGATTGGTCAGTCTGGGCAAGTTGATACAAAATGTCAACTTGAATTCTTTCCAGCCACAGGGGCCACTTCCGATAATAAGTCTATGGAACATAATAACGTTTTACATTCTATGTTCAACGCACAATCAGGGATGCATCCCACTTGGACACCAAAATCAGTGTTCCAAAAAGAGAGTTCTCCATTTCCCACAAGTATTTCCTCCCATTCCAATCCTAAAAGCCAGAACTCAGAACCTCATCACTGGTCGGATGATGCCACCTATACTTGTGATCAAAGCAATAATGATTTTGCTATGCATGAATCTCCATCTAATGGTCAAAGTTGTACCAGTTTTTACCATGACGCGGAGAGTCATAACGCCAGTGGTGTGTGTGAAGGCCTAGGCAGCGTAAGTGATGGAAATGCCCCTTCAACTATTGTAGGCAAGAACAACCTTGAAAGTTCTATGAATAACGATCACCATGACGGGCTTAGAGACACGAGTTCTCATCGCACTAGCCAAAGAGAAGCAGCTCTAACAAAGTTTCGACTGAAGCGAAAAGACAGATGCTATGACAAAAAGGTCCGATATGAAAGCCGAAAAAGACAGGCAGAGAACCGCCCCCGGGTGAAAGGGCAGTTTGTTCGCCAAGTACAGGGTGAAGTTCCGGTAGCTGAAACCAGAGGCTACTGA 1827 0.4028 MGDHNNKFVPPTMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETLKNKSLDIDLVLTEVDLPSISGFSLLTQIMDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKPVRRNELRNLWQHVWRRNTTITMPPQNITFPQNKLDVAAENNAASNHSSGSVASTHKNIECSEKNSEPHDNSIKYERESAEYKDVTGEKSTTIASKAAGCDKISTGLRLGQNYDYSETENRDEVLGTELSKAHPHINTKIHQSNNELEDHSAGAIDLMATFDKYPKNNHANCSFSGGNTAKFDFDTQFELSLQRDSPGSPPKPTTEERQILNHSNASAFSWYGSSMVLQPLFPTKSSHESQKLSENINTTHHYDGKKQKQENITYLVIGQSGQVDTKCQLEFFPATGATSDNKSMEHNNVLHSMFNAQSGMHPTWTPKSVFQKESSPFPTSISSHSNPKSQNSEPHHWSDDATYTCDQSNNDFAMHESPSNGQSCTSFYHDAESHNASGVCEGLGSVSDGNAPSTIVGKNNLESSMNNDHHDGLRDTSSHRTSQREAALTKFRLKRKDRCYDKKVRYESRKRQAENRPRVKGQFVRQVQGEVPVAETRGY* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3915 608 PANTHER PRR RESPONSE REGULATOR 9 182 - -
Mtr7g3915 608 PANTHER PRR RESPONSE REGULATOR 186 585 - -
Mtr7g3915 608 MobiDBLite consensus disorder prediction 159 177 - -
Mtr7g3915 608 SUPERFAMILY CheY-like 12 137 IPR011006 -
Mtr7g3915 608 MobiDBLite consensus disorder prediction 432 472 - -
Mtr7g3915 608 Coils Coil 565 585 - -
Mtr7g3915 608 MobiDBLite consensus disorder prediction 520 555 - -
Mtr7g3915 608 MobiDBLite consensus disorder prediction 178 196 - -
Mtr7g3915 608 ProSiteProfiles Response regulatory domain profile. 15 133 IPR001789 GO:0000160
Mtr7g3915 608 PANTHER TWO-COMPONENT RESPONSE REGULATOR 186 585 IPR045279 GO:0009736
Mtr7g3915 608 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 182 IPR045279 GO:0009736
Mtr7g3915 608 Pfam Response regulator receiver domain 16 127 IPR001789 GO:0000160
Mtr7g3915 608 Gene3D - 14 214 - -
Mtr7g3915 608 ProSiteProfiles CCT domain profile. 553 595 IPR010402 GO:0005515
Mtr7g3915 608 SMART REC_2 14 129 IPR001789 GO:0000160
Mtr7g3915 608 MobiDBLite consensus disorder prediction 533 555 - -
Mtr7g3915 608 Pfam CCT motif 553 595 IPR010402 GO:0005515
Mtr7g3915 608 MobiDBLite consensus disorder prediction 159 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3915 Mtr-Chr7 55909136 55913290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3915 528 597 Response Regulator Gene Family AT5G24470 61.111 1.04e-19 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mtr7g3915 Response_reg 3.5e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3915 K12130 - gmx:100779346 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3915 7 55909136 55913290 Mtr7g3915 7 55909136 55913290 ECH
Mtr8g0736 8 8877384 8882216 Mtr7g3915 7 55909136 55913290 ECH