Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3905 ATGGGTCAGTGTTACGGGAAAACGGTTCCCGGCGCCGGCAGCCACCGTCAACAAAACACAACCACCATAATTGACACTTCCGCTGGTGATGGTGACGGCAGTCGTACTCCTTTACCATCCTTCGCCAACGGAATTCCATCTGTCAAGAACACGCCAGCTCGCTCTTCTTCACACGCCAGTCCATGGCCTAGTCCTTACCCTCACGGCGTGAACCCGAGTCCATCGCCAGCTAGGGCCTCCACGCCCAAAAGATTTTTCCGGCGACCTTTTCCGCCGCCTTCTCCTGCGAAGCATATAAGGGAGTCTCTAGCGAAGAGGCTTGGGAAGGCAAAGCCTAAAGAAGGTCCAATACCGGAGGAGCATGGTGTGGAAACGGATTCACAGTCGCTTGATAAGAGCTTTGGGTATAGCAAGAATTTTGGAGCTAAGTATGAGTTAGGGAAAGAAGTCGGACGAGGGCATTTTGGTCATACTTGTTCTGCTAGGGCAAAGAAAGGTGATCTCAAAGATCAACCTGTTGCTGTTAAGATCATTTCCAAGTCCAAGATGACCTCGGCAATAGCAATTGAAGATGTCCGTAGGGAAGTGAAGCTATTGAAAGCTCTGTCAGGCCATAAGCATCTTATCAAATTTCACGATGCTTGTGAGGATGCCAATAACGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACCGAATTTTGTCAAGGGGAGGAAGGTATACCGAGGAGGATGCAAAAGCTATTGTTTTGCAGATTCTAAGCGTAGCTGCCTTTTGTCATCTTCAAGGTGTTGTGCATCGTGACTTGAAGCCTGAGAATTTCCTCTTCACTTCAAGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTCTCTGACTTCATCAGGCCAGAAGAACGGTTGAATGACATTGTTGGGAGTGCGTATTATGTTGCACCTGAGGTTCTTCACAGGTCTTATAGTGTGGAAGCAGATATATGGAGTATTGGTGTTATCACCTACATCTTATTATGTGGAAGTCGACCATTCTGGGCACGAACCGAGTCTGGAATCTTTCGTACAGTTCTCAGAGCTGATCCTAACTTCGACGATTTACCTTGGCCCTCTGTGTCTCCAGAGGGAAAGGACTTTGTCAAAAGGCTCCTAAACAAGGACTACAGGAAAAGAATGACTGCCGCTCAAGCTCTAACTCACCCGTGGTTGAGGGATGAAAGTCGTCCGATCCCTTTAGATATATTAATTTATAAGTTGGTGAAGTCTTATCTTCACGCGACACCATTCAAACGTGCAGCTGTGAAGGCCCTTTCGAAAGCATTGACGGACGATCAGTTGGTGTATCTTAGAGCGCAATTCAGATTGTTGGAACCAAATAGAGATGGGCACGTCTCCCTCGACAACTTCAAAATGGCTCTTGCACGTCATGCAACTGATGCCATGAGGGAATCAAGGGTTCTTGACATCATACACACGATGGAACCGCTTGCGTATAGAAAGATGGATTTTGAAGAATTTTGTGCAGCTGCCACTAGCACATATCAATTGGAGGCACTTGATGGGTGGGAAGATATTGCCTGCGCTGCATTTGAACATTTTGAGAGTGAGGGAAATCGTGTGATATCGATTGAAGAATTAGCAAGAGAGCTAAATCTTGGTCCTTCGGCGTATTCAGTTCTCAGAGATTGGATTCGAAATACTGATGGAAAGCTTAGTTTACTTGGATATACAAAATTTTTGCATGGTGTGACTCTGCGGAGTTCACTACCAAGACCTCGTTAG 1791 0.4618 MGQCYGKTVPGAGSHRQQNTTTIIDTSAGDGDGSRTPLPSFANGIPSVKNTPARSSSHASPWPSPYPHGVNPSPSPARASTPKRFFRRPFPPPSPAKHIRESLAKRLGKAKPKEGPIPEEHGVETDSQSLDKSFGYSKNFGAKYELGKEVGRGHFGHTCSARAKKGDLKDQPVAVKIISKSKMTSAIAIEDVRREVKLLKALSGHKHLIKFHDACEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKAIVLQILSVAAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPEERLNDIVGSAYYVAPEVLHRSYSVEADIWSIGVITYILLCGSRPFWARTESGIFRTVLRADPNFDDLPWPSVSPEGKDFVKRLLNKDYRKRMTAAQALTHPWLRDESRPIPLDILIYKLVKSYLHATPFKRAAVKALSKALTDDQLVYLRAQFRLLEPNRDGHVSLDNFKMALARHATDAMRESRVLDIIHTMEPLAYRKMDFEEFCAAATSTYQLEALDGWEDIACAAFEHFESEGNRVISIEELARELNLGPSAYSVLRDWIRNTDGKLSLLGYTKFLHGVTLRSSLPRPR* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3905 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Mtr7g3905 596 ProSitePatterns Protein kinases ATP-binding region signature. 150 176 IPR017441 GO:0005524
Mtr7g3905 596 Gene3D - 415 586 - -
Mtr7g3905 596 MobiDBLite consensus disorder prediction 1 130 - -
Mtr7g3905 596 Gene3D Phosphorylase Kinase; domain 1 137 232 - -
Mtr7g3905 596 PANTHER SERINE/THREONINE-PROTEIN KINASE 49 589 - -
Mtr7g3905 596 SUPERFAMILY EF-hand 432 585 IPR011992 -
Mtr7g3905 596 Pfam Protein kinase domain 144 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3905 596 ProSiteProfiles Protein kinase domain profile. 144 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3905 596 CDD STKc_CAMK 143 405 - -
Mtr7g3905 596 MobiDBLite consensus disorder prediction 99 127 - -
Mtr7g3905 596 MobiDBLite consensus disorder prediction 40 62 - -
Mtr7g3905 596 SMART serkin_6 144 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3905 596 Gene3D Transferase(Phosphotransferase) domain 1 233 414 - -
Mtr7g3905 596 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
Mtr7g3905 596 SUPERFAMILY Protein kinase-like (PK-like) 143 430 IPR011009 -
Mtr7g3905 596 MobiDBLite consensus disorder prediction 12 29 - -
Mtr7g3905 596 PANTHER CDPK-RELATED KINASE 3 49 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3905 Mtr-Chr7 55800430 55806754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3905 61 590 EF-hand Containing Proteins AT3G50530 62.587 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr7g3905 Pkinase 1.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3905 - - rcu:8266291 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3905 7 55800430 55806754 Mtr7g3905 7 55800430 55806754 ECH