Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3898 ATGAGACTAACTCCTACCACTTCGGATACTGAGGTTTCTGGACTTGAAAAAAAAAATATAGGACGTATCACGCAAATAATTGGTCCGGTACTCGATGTAGTTTTTCCACCAGGGAAGATGCCTAATATTTACAACGCTCTGATAGTTCAAGGTCGAGATACTGTTGGCCAAGAAATTAACGTAACTTGTGAAGTACAGCAATTATTAGGAAATAATAGAGTTAGAGCTGTAGCTATGAGTGCTACAGATGGTCTAAAGAGAGGAATGGTTGTGATTAACACGGGAGCTCCCCTAAGTGTTCCAGTCGGCGGAGCAACCCTAGGTCGAATTTTCAACGTGCTTGGAGAGCCTATTGATAATTTAGGTCCTGTAGATACTGGGACAACCTCTCCTATTCATAGATCCGCGCCTGCCTTTATACAATTAGATACAAAATTATCCATTTTTGAAACAGGAATTAAAGTTGTAGATCTTTTAGCTCCTTATCGCCGTGGCGAAAAAATAGGACTTTTCGGTGGAGCTGGGGTAGGTAAAACAGTACTGATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGAGGTGTATCCGTATTTGGCGGAGTAGGTGAGCGTACTCGTGAGGGAAATGATCTTTATATGGAAATGAAAGAATCCGGAGTAATTAATGAAAAAAATATTGCGGAATCAAAAGTAGCTCTAGTCTACGGGCAAATGAATGAACCGCCCGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCAGAATATTTCCGAGATGTCAATGAACAGGACGTCCTTCTATTTATCGACAATATCTTCCGTTTTGTCCAAGCCGGATCCGAAGTATCTGCCCTATTGGGCCGAATGCCTTCCGCTCTGGGGAAGTCAAAAAAGGTTTTCTCCTTGAAGACAAATAACAACATTTTGTCATGTCACCCATGA 951 0.4164 MRLTPTTSDTEVSGLEKKNIGRITQIIGPVLDVVFPPGKMPNIYNALIVQGRDTVGQEINVTCEVQQLLGNNRVRAVAMSATDGLKRGMVVINTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTGTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGEKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSALGKSKKVFSLKTNNNILSCHP* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3898 316 Pfam ATP synthase alpha/beta family, beta-barrel domain 23 95 IPR004100 GO:0046034|GO:1902600
Mtr7g3898 316 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 1 299 - -
Mtr7g3898 316 Gene3D - 18 97 - -
Mtr7g3898 316 PANTHER ATP SYNTHASE 1 299 - -
Mtr7g3898 316 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 152 304 IPR000194 GO:0005524
Mtr7g3898 316 Gene3D - 98 308 IPR027417 -
Mtr7g3898 316 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 19 97 IPR036121 GO:0046034|GO:1902600
Mtr7g3898 316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 305 IPR027417 -
Mtr7g3898 316 SMART AAA_5 164 309 IPR003593 -
Mtr7g3898 316 CDD ATP-synt_F1_beta_N 19 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3898 Mtr-Chr7 55765448 55766902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3898 23 304 Primary Pumps ATPases(2) AT1G20260 24.919 4.64e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3898 K02112 - vvi:4025008 545.428