Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3891 ATGGGAAGAACTCCTTGTTGTTCAAAAGTTGGGTTGCATAGAGGTCCATGGACTTCTCGTGAAGATGCATTGCTCACCAAATATATTCAAGCTCATGGAGAAGGCCAATGGAGATCACTTCCAAAAAGAGCTGGGCTTCTTAGATGTGGAAAAAGTTGCAGACTAAGATGGATGAACTATCTAAGACCAGATATAAAGAGAGGAAACATAACTCCAGAAGAAGATGATCTTATTATCAGAATGCATTCACTTATTGGTAATAGATGGTCCCTTATTGCGGGAAGATTACCAGGACGTACAGATAATGAGATAAAGAATTACTGGAACACACATCTAAGTAAAAAGCTAAAAAATCAAGAACAAATAGAGAAGAAGAAAAAGAAGCAGAAGAAAAATGACAAAAACAAAGTCATAACCAAAGTACCAGAAGATTCAGAGAAGAAGACCTTAGTTTATCTACCAAAGCCTATAAGGGTCAAGAAGACTTTATCATCAATAATACCAAGAACTGATATAACCTTGAATTTGGAATACAAATCAGTAACAACAAGCCAAGAGGAAGAGCAAAGAACAGAAACAAAAGAGAGAGACAGTGATGGGTTTGGATTGTTGTTTGAGGAACAGTACCATGCAGACTTGGTCAACAATGATGACATTGAATGCCAATCTGGTTTTCTTGAGAAGATGTATGAAGAGTACTTGCAGCTATTGAAGAATGAAGAAAATCATGAAAAAATACTAGATTCTTTTGCTCAGTCCTTATTAGCGTGA 771 0.3645 MGRTPCCSKVGLHRGPWTSREDALLTKYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLIGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLKNQEQIEKKKKKQKKNDKNKVITKVPEDSEKKTLVYLPKPIRVKKTLSSIIPRTDITLNLEYKSVTTSQEEEQRTETKERDSDGFGLLFEEQYHADLVNNDDIECQSGFLEKMYEEYLQLLKNEENHEKILDSFAQSLLA* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3891 256 MobiDBLite consensus disorder prediction 118 140 - -
Mtr7g3891 256 Gene3D - 71 141 - -
Mtr7g3891 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mtr7g3891 256 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mtr7g3891 256 CDD SANT 16 61 IPR001005 -
Mtr7g3891 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mtr7g3891 256 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mtr7g3891 256 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 123 244 - -
Mtr7g3891 256 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 120 - -
Mtr7g3891 256 Gene3D - 14 66 - -
Mtr7g3891 256 CDD SANT 71 112 IPR001005 -
Mtr7g3891 256 Coils Coil 112 132 - -
Mtr7g3891 256 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mtr7g3891 256 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mtr7g3891 256 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mtr7g3891 256 PANTHER MYB TRANSCRIPTION FACTOR 1 120 - -
Mtr7g3891 256 PANTHER MYB TRANSCRIPTION FACTOR 123 244 - -
Mtr7g3891 256 SMART sant 66 114 IPR001005 -
Mtr7g3891 256 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3891 Mtr-Chr7 55719255 55720517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3891 4 171 MYB Transcription Factor Family AT3G13540 57.738 1.15e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g3891 Myb_DNA-binding 1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3891 K09422 - gmx:778044 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3891 7 55719255 55720517 Mtr7g3891 7 55719255 55720517 ECH
Mtr7g3891 7 55719255 55720517 Mtr8g0779 8 9612208 9613702 PCT