Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3882 ATGGACTCTTCTTCCGGCGACCGTCCTAAAGCGGCGGTGAATCGAGCCAATGTCGCCGGAGAGAACCACATACCGCGGCTTAAGAATCAATTCAACAGCAAAATTGAAGATGCAGAGTCTAACAATAGGAAGAGGAAGATCGTCGCTGTCACCGATCTCTATAACAGATCGGAGTCGGAGCTGAATGGAAACTCCACGAGAAAGAAGAAGAAACCGATTCATCAAGAGAAGGAAGGTGATTTTGGCAAGGGACTAATGGATGTGTATAAGGTCAACAAAGCCAAAAATGGAATTGAAGATACCAAACAACAGGAAAAGGAAGGGAGCTGTAACAAGGTTAACAAAGCCAAAAATGGAGTCGAAGATACCAAACAACGGGGTATATCCAAAAAAGCCAAGAAGGGTGAAAGTTTGATGTGTCATCAGTGCCAGCGGAATGATAAGAGTGGTGTTGTCTTTTGCTCAAGTTGCAACAGAAAGCGCTATTGTTACGAATGCATTGAGAACTGGTACCCAGGAAAAACCCGAGAGGAATTTAAGAACGTGTGTCCATTTTGTCTGGGTAATTGTAACTGCAAAGCTTGCTTACGGGAGTTTCCTGTGCTGATGGACCGAGAAATAGACGCCAGTGTCAAATTACAGCGGCTGCTGTACTTGTTATCTAAAGCCCTGCCAGTTCTGAGGCATATCCACCGGGAACAGAGCTTGGAACTAGAGACTGAAACCAAAATAAGGGGTAAGGAACTACAAGAAATTGACATAACAAGAACAAAGCTAGATGAAAGTGAACGCTTGTACTGTGACAATTGCAATACATCCATATATGGATTTTACCGTAGCTGCCCCAACACCGGTTGCTCTTATGATCTCTGTCTCGTGTGCTGTCAAGAGCTCAGAAAGGGCTGCCAACCTGGAGGCATGGAGGCTGGAACATCTCATGAAAAATTTGAAGAGATTTTTCACCATCACGGTTCAACAAAAAATCGGAGTAAAATACATCGTAAAAGATATGACTGGGAGAGCGAACTTGCACCTACTAGTTTTCATTATCAGGCTGACATGTTCTCTCCCTTCCCAGAATGGAAAGCTAACGGTGATGGTAACATTCCATGTCCTCCAAAGCAGCGTGGAGGTTGCGGTACTGCATTACTAGAACTGAGACGCATTTACAAAGCTAATTGGGTAGCAAAACTACTAAATAATGCCGAGGATCTCACTAGAAATTACACGCCAGTGGATGTGGATATTACTGAAAAGTGTTCTTCCTGCCAGCTAAACTTGTTAGAAGGAAAAATCAATCCTGAAGTCAGGAGGGCAGCAATTCGGGATGACAGTAAAGATAACTTCTTATATAGTCCAAACACCCTTGACATATTTGATGATGAGATCGAGCACTTCCAGAGGCACTGGATGAAGGGAGAACCTGTGGTTGTGAGAAATGTTTTGGCCAAAACATCTGGTCTAAGTTGGGAACCAATGGTTATGTGGAGGGCCCTCAGAGAAACAGGTTCCAAAGCGAAGTTGAAAGAGGAAACACAAAGTGTTAAGGCTGTTGATTGCTTGGATTGGTGCGGGGTTGAAATTAATATACACCAATTTTTTCAAGGCTACGTAAAGGGTCGAATGCATAAAGATAAGTGGCCAGAAATGTTGAAATTGAAAGATTGGCCTTCATCCACCTCTTTTGAAGAGCGCTTGCCTAGGCATGGTGCTGAATTCCTTGCTGCACTTCCGTATATGGACTACACTGATCCAAAATCAGGTCTTTTAAATTTTGCTAGTAAACTTCCTGCTGGCTCGTTGAAACCAGATTTGGGACCCAAAACATATATTGCTTATGGATTTTCTGAAGAGCTTGGCCGAGGAGATTCTGTGACCAAACTGCACTTGGATGTGTCTGATGCGGTGAATGTGCTGACACACACAAACAAGGTGAATATAGCTCCCTGGCAGAGAGAAAGCATAAATAAATTGAAGAAGGGATACGATAAAGAAGACTATTCTGACCTTTATTGTGAAGCTTCAGCCAATGTTGATGGAAAATCTAAATCTAAAGCATTGGACCATGACCAAAAGGCAGAGAATGAAGTTAACCGGATTACACGAAGTAGCCAAGTAGATCAGTGCATTTCATCAATATCCGAAGACTGGTGTGGAAAGTTAGAATCACGGAACACAATACAATGTGATGATAACGGAAAGGGCTCTTGCACTTACAGAATGAGGATTAATTTTTCAGATGGTAATGTGTCTAGTGATCCCAAGATAGAGTCAAAACAAGGCATGGGGAGAGATTCTTTAGACATTGATAATGGGGCTGAGGCTGTCCTTGGTGGTGCTGTTTGGGACATCTTCCGCCGGCAAGATGTCCCAAAGTTAATTGAGTACTTGAGAAAGCACAAGAAGGAATTTCGTCATATCAATAATGAACCTGTTGATTCAGTTATTCATCCTATTCATGATCAGACTCTATTCTTAAATGAGAGGCATAAGAAACAGCTAAAAAGAGAATTTAACGTTGAACCATGGACTTTTGAGCAACACCTTGGGGAGGCTGTTTTCATTCCAGCAGGATGTCCTCATCAAGTGAGAAATAGACAGTCTTGTATGAAGGTTGCACTTGACTTTGTTTCTCCAGAAAATGTTGAAGAATGTTTACGGCTAACTGAAGAGTTTCGTTTACTCCCGAAGTCCCACAGGGCCAAGGAGGACAAATTGGAGGTTAAAAAGATGACCCTTTATGCTGTAAGTAGTGCTGTTAGACAAGTCAAAGAATTGACTATGGCCAATGAGAAGGTTGGATCTGTTTGA 2811 0.4251 MDSSSGDRPKAAVNRANVAGENHIPRLKNQFNSKIEDAESNNRKRKIVAVTDLYNRSESELNGNSTRKKKKPIHQEKEGDFGKGLMDVYKVNKAKNGIEDTKQQEKEGSCNKVNKAKNGVEDTKQRGISKKAKKGESLMCHQCQRNDKSGVVFCSSCNRKRYCYECIENWYPGKTREEFKNVCPFCLGNCNCKACLREFPVLMDREIDASVKLQRLLYLLSKALPVLRHIHREQSLELETETKIRGKELQEIDITRTKLDESERLYCDNCNTSIYGFYRSCPNTGCSYDLCLVCCQELRKGCQPGGMEAGTSHEKFEEIFHHHGSTKNRSKIHRKRYDWESELAPTSFHYQADMFSPFPEWKANGDGNIPCPPKQRGGCGTALLELRRIYKANWVAKLLNNAEDLTRNYTPVDVDITEKCSSCQLNLLEGKINPEVRRAAIRDDSKDNFLYSPNTLDIFDDEIEHFQRHWMKGEPVVVRNVLAKTSGLSWEPMVMWRALRETGSKAKLKEETQSVKAVDCLDWCGVEINIHQFFQGYVKGRMHKDKWPEMLKLKDWPSSTSFEERLPRHGAEFLAALPYMDYTDPKSGLLNFASKLPAGSLKPDLGPKTYIAYGFSEELGRGDSVTKLHLDVSDAVNVLTHTNKVNIAPWQRESINKLKKGYDKEDYSDLYCEASANVDGKSKSKALDHDQKAENEVNRITRSSQVDQCISSISEDWCGKLESRNTIQCDDNGKGSCTYRMRINFSDGNVSSDPKIESKQGMGRDSLDIDNGAEAVLGGAVWDIFRRQDVPKLIEYLRKHKKEFRHINNEPVDSVIHPIHDQTLFLNERHKKQLKREFNVEPWTFEQHLGEAVFIPAGCPHQVRNRQSCMKVALDFVSPENVEECLRLTEEFRLLPKSHRAKEDKLEVKKMTLYAVSSAVRQVKELTMANEKVGSV* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3882 936 MobiDBLite consensus disorder prediction 58 79 - -
Mtr7g3882 936 MobiDBLite consensus disorder prediction 1 25 - -
Mtr7g3882 936 ProSiteProfiles Zinc finger RING-type profile. 140 186 IPR001841 -
Mtr7g3882 936 SMART cupin_9 566 893 IPR003347 -
Mtr7g3882 936 MobiDBLite consensus disorder prediction 62 79 - -
Mtr7g3882 936 SUPERFAMILY Clavaminate synthase-like 463 913 - -
Mtr7g3882 936 Pfam JmjC domain, hydroxylase 778 876 IPR003347 -
Mtr7g3882 936 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN 1 750 - -
Mtr7g3882 936 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN 765 930 - -
Mtr7g3882 936 Gene3D Cupin 455 902 - -
Mtr7g3882 936 ProSiteProfiles JmjC domain profile. 585 893 IPR003347 -
Mtr7g3882 936 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1 750 IPR045109 GO:0032454|GO:0033169
Mtr7g3882 936 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 765 930 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3882 Mtr-Chr7 55624027 55636273 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mtr7g3882 JmjC 5.1e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3882 K15601 - vvi:100258626 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3882 7 55624027 55636273 Mtr7g3882 7 55624027 55636273 ECH