Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3869 ATGGACATCTTGAAGTTCTTCTTTCATTTGTTCATATTATTTCCTGTCATATATACCTCAGAGGACTATTGTCAAAATTCTTGGTGCAGTGAAAATAACATCCTTATTCGCTTCCCTTTTCAATTAGAAGTTGATGGTGATCCACGTCCTTATTGTGGCTATCCTGGTTTCAAATTGTCTTGTACTAATGATGGCAAAACTGTTCTAACACTTCCTTATTCAGGAGTGTTCTATGTTCGCAAAATCAACTATCTCGAACACCACATACAAGTCTATGACCCTCATCGTTGCCTTCCAAATCGTCTTCTAAGTCTCAACCTTTCAGGTTCACCTTTCGTTACCGAACTTCTTACTAACTACACTGTCTTAAGCTGCTCAACTCCGAACATGTTAGGATCACAATTCACACTTGACTGTCTCAGCAACTCTACGCATTTTGTATCAGCTATTCCTTCACTGAGCTTCACCAATTCATTGCCTCAGTCTTGCTACATCATTAGAAATTTTTCAGTTCCAGTTGCAAGTTCATATCCGGAATTTTTTTTAAACAACTTCAGTGAAGATCTTGAACTAACATGGTCTTCACCGGATTGTAGATATTGCGAATTACAAGATCGCATGTGCGGATTTGAGAGCAGAAACAACAATCAAGTTCGTTGTTTCTCTAATCAACAAACAGGTCATTCACAACATAGTCTTATGATTTCTAGAATCATAATATTATCAATTGGGGGAGCAATGATGTGTGGAATTGGGATAGGATGCGTAACATGGTTCAAGCGTAGAAGAAGGACGATATCAGCTGAACCTTCCATTGACATTACCATTACAAGGATGAGGATGGGTCTGGATGAGTCAACAATTGAGTCTTTTGGGAAGGTTGTGTTAGGAGAGAGCCGAAGGCTGCCGGGAGTGGGACACAACGATGGAACCGGATGTTGCTCAATATGCCTCTCAGAGTACAACAGTAAGGACATAATTAGATGCATTCCTGAATGCAAACACTGTTTTCATGCTCACTGCATTGATGAATGGCTTCGCATGAACGCTACATGCCCAGTTTGCCGCAACTCTCCCTTCCCATCTCATTCTCTTCTTCAGATATCATCATGA 1113 0.4034 MDILKFFFHLFILFPVIYTSEDYCQNSWCSENNILIRFPFQLEVDGDPRPYCGYPGFKLSCTNDGKTVLTLPYSGVFYVRKINYLEHHIQVYDPHRCLPNRLLSLNLSGSPFVTELLTNYTVLSCSTPNMLGSQFTLDCLSNSTHFVSAIPSLSFTNSLPQSCYIIRNFSVPVASSYPEFFLNNFSEDLELTWSSPDCRYCELQDRMCGFESRNNNQVRCFSNQQTGHSQHSLMISRIIILSIGGAMMCGIGIGCVTWFKRRRRTISAEPSIDITITRMRMGLDESTIESFGKVVLGESRRLPGVGHNDGTGCCSICLSEYNSKDIIRCIPECKHCFHAHCIDEWLRMNATCPVCRNSPFPSHSLLQISS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3869 370 CDD RING-H2_EL5_like 314 356 - -
Mtr7g3869 370 Pfam Ring finger domain 314 356 IPR001841 -
Mtr7g3869 370 Pfam Wall-associated receptor kinase C-terminal 178 224 IPR032872 -
Mtr7g3869 370 ProSiteProfiles Zinc finger RING-type profile. 314 356 IPR001841 -
Mtr7g3869 370 PANTHER RING-H2 FINGER PROTEIN ATL21A-RELATED 3 365 - -
Mtr7g3869 370 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 360 IPR013083 -
Mtr7g3869 370 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 3 365 - -
Mtr7g3869 370 SUPERFAMILY RING/U-box 313 362 - -
Mtr7g3869 370 SMART ring_2 314 355 IPR001841 -
Mtr7g3869 370 Pfam Wall-associated receptor kinase galacturonan-binding 24 93 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3869 Mtr-Chr7 55514363 55519985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3869 24 366 C3H Transcription Factor Family AT2G46495 39.943 4.35e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3869 - - gmx:100799895 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3869 7 55514363 55519985 Mtr7g3869 7 55514363 55519985 ECH
Mtr7g3869 7 55514363 55519985 Mtr8g0810 8 10084131 10087882 PCT