Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3867 ATGTTTAAGGTTTCTAATTTGATGTTGAATTTTACAGGCTTGATTCTAGTTTTAATTATGAATACAAAGGGACTTAAATTTGTGAGGTTTGATGATTGGAGATCAGAGTCCTCTTTTAGTATAGAGCAGGAAAACACTGTAAACAAAAGAAAAGAGAGACCAAGTGTAAGTGCTGTTTTGAAGAGTATTGGAAGAAGATTTGTGAGTGGATCGGAGAAGATGAAGAAATTTAGAAGACCGTCTTCAATTGTTCACCCTGTAAGTGAAGGACAGACAAAGAAGTTGGATTCTTCTAAGCGCAAAATTCTTGATCCACAGGGGCCTATGCTTCAGAAATGGAACAAAATCTTTGTAATCACATGTGTGCTGGCAATTTCTGTGGACCCTTTTTTCTTTTACATTCCAGTGATTGTCGGTAAACAAAAATGTCTTGATTTGGATGGAACATTGCAGACTACTATCAGTGTTCTTCGCACGTTCTTCGATCTTTTCTACATTCTTCGCATCATCTTTCAGTTCAGAACCGGATTTATTGCGCCTTCTTCTCGTGTTTTTGGAAGAGGTGAACTCGTTGACGATCCTGTCGCCATAATGAAAAGATACTTGAGTTCTCATTTCATCGTTGACATTCTATCAATTATTCCACTACCACAGATTATTGTTTTGGCTATAATTCCAAACTTGAAAAGCTCAGGTCCATTTTTAGCAAAGGATTTGTTGAAATATACAGTATTAATTCAGTATGTGCCAAGACTACTGCGAATTCGTCCGCTATTCAAAGAAGTAACTAGAACTTCAGGCATATTGACAGAGACAGCATGGGCTGGAGCTGTTTACAATCTTTTCCTCTACATGCTAGCAAGTCATGTGGTTGGAGCTAACTGGTATCTGCTTTCGGTAGAATCACAGGTGCGGTGTTGGCGCAGAGTGATGAACAATGCTTCGATCTTTCATGACTCATTCTTGGGTTGTGGACCGCGAAATGCAACAGTCCTCTCACTTCTCAACGGTGCTTGTACTTTGGTTGACCCTGATGAAATCAACAACACAACAACCTTCAATTTTGGAATATTTTACGATGCTCTACAATCACTTGTGGTTGATTCAAACACAGATTTTCCTCAGAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGAAATTTAAGTTCTCTTGGACAAAACCTCAAGACAACTACTTATGTCACGGAGATAGCCTTTGCGATTTTCATTGCCATTTTTGGATTGGTTTTATTCTCATTACTTATTGGAAACATGCAGAAATATTTGGAATCTACAACTGTTAGGGAGGAAGAGATGAGAGTGAAGAGGAGGGATGCAGAACGATGGATGTCTCACCGTATGTTGCCTGATAACTTGAAGCAAAGAATTCGAAGGTATGAACAATACAAATGGCAAGAAAATAGAGGTGTTGAAGAAGAGACTTTAATTCACAACCTCCCTAAAGATCTCAGAAGAGACATAAAGCGTCATCTTTGCTTAGCTTTAGTAAAAAAAGTGCCAATGTTTGAGAAAATGGATGCGCAATTGTTGGATGCAATGTGTGATAGACTGAAGCCAGTTCTGTATACAGAGAAGAGCTGCATTGTTCGCGAAGAAGATCCAGTTGATGAGATGCTTTTCATTATGCGAGGAAAAGTCGCTACCATGACAACAAATGGTGGAAGAACTGGTTTCTTCAACTCATTATTTCTAATGCCTGGTGATTTTTGTGGAGAGGAACTTTTAACATGGGCTTTGGATCCAAACTCCTCCTCGAATCTACCTACTTCAACTAGAACAGTAGAAACTATATCAGAAGTTGAAGCATTTGCACTCAAGGCTGATGACTTGAAGTTTGTTGCTTCCCAATTTAGACGTCTTATCAACAGCAAACAACTCCAACACACTTTCAGGTCATATTCGCCACAATGGAAGACATGGGGTGCATGTTTCATACAAGCAGCTTGGCGTCGATATTGTAAAAAGAAGATTGAGAGGACATTGCGTGAAGCAGAAGACAAGCTACAAGATGCTTTGGCAAATGAGGAAGGGTCAACTATTAGCCTTGGTGCAACAATATATGCATCAAGGTTTGCTGCAAATGTATTAAAAAACTTGCGAGAAAATAACAGACAAAACAGAATGCCGCAGAGACTACTACCTCTTTTGCCTCCAAAGCCAGCTGAACCTGATTTCACTGCTCAAAAACACTAG 2214 0.3939 MFKVSNLMLNFTGLILVLIMNTKGLKFVRFDDWRSESSFSIEQENTVNKRKERPSVSAVLKSIGRRFVSGSEKMKKFRRPSSIVHPVSEGQTKKLDSSKRKILDPQGPMLQKWNKIFVITCVLAISVDPFFFYIPVIVGKQKCLDLDGTLQTTISVLRTFFDLFYILRIIFQFRTGFIAPSSRVFGRGELVDDPVAIMKRYLSSHFIVDILSIIPLPQIIVLAIIPNLKSSGPFLAKDLLKYTVLIQYVPRLLRIRPLFKEVTRTSGILTETAWAGAVYNLFLYMLASHVVGANWYLLSVESQVRCWRRVMNNASIFHDSFLGCGPRNATVLSLLNGACTLVDPDEINNTTTFNFGIFYDALQSLVVDSNTDFPQKFFYCFWWGLRNLSSLGQNLKTTTYVTEIAFAIFIAIFGLVLFSLLIGNMQKYLESTTVREEEMRVKRRDAERWMSHRMLPDNLKQRIRRYEQYKWQENRGVEEETLIHNLPKDLRRDIKRHLCLALVKKVPMFEKMDAQLLDAMCDRLKPVLYTEKSCIVREEDPVDEMLFIMRGKVATMTTNGGRTGFFNSLFLMPGDFCGEELLTWALDPNSSSNLPTSTRTVETISEVEAFALKADDLKFVASQFRRLINSKQLQHTFRSYSPQWKTWGACFIQAAWRRYCKKKIERTLREAEDKLQDALANEEGSTISLGATIYASRFAANVLKNLRENNRQNRMPQRLLPLLPPKPAEPDFTAQKH* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3867 737 Gene3D Jelly Rolls 506 626 IPR014710 -
Mtr7g3867 737 Coils Coil 661 681 - -
Mtr7g3867 737 MobiDBLite consensus disorder prediction 714 737 - -
Mtr7g3867 737 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 25 735 - -
Mtr7g3867 737 SUPERFAMILY Voltage-gated potassium channels 104 430 - -
Mtr7g3867 737 CDD CAP_ED 508 628 IPR000595 -
Mtr7g3867 737 Gene3D - 116 431 - -
Mtr7g3867 737 Pfam Cyclic nucleotide-binding domain 529 619 IPR000595 -
Mtr7g3867 737 SUPERFAMILY cAMP-binding domain-like 435 625 IPR018490 -
Mtr7g3867 737 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 25 735 - -
Mtr7g3867 737 ProSiteProfiles cAMP/cGMP binding motif profile. 508 592 IPR000595 -
Mtr7g3867 737 Pfam Ion transport protein 113 436 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr7g3867 737 SMART cnmp_10 508 639 IPR000595 -
Mtr7g3867 737 Gene3D Helix hairpin bin 434 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3867 Mtr-Chr7 55503255 55507416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3867 20 734 Ion Channels AT5G53130 64.592 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3867 K05391 - gmx:100797784 1137.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3867 7 55503255 55507416 Mtr7g3867 7 55503255 55507416 ECH
Mtr7g3867 7 55503255 55507416 Mtr8g0812 8 10094068 10099119 PCT